mirror of
https://github.com/Helsinki-NLP/OPUS-MT-train.git
synced 2024-11-27 11:03:13 +03:00
cleanup environment definitions
This commit is contained in:
parent
71174062d6
commit
52f0bea9a9
162
lib/env.mk
162
lib/env.mk
@ -8,26 +8,6 @@
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SHELL := /bin/bash
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## setup local Perl environment
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## better install local::lib and put this into your .bashrc:
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##
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## eval "$(perl -I$HOME/perl5/lib/perl5 -Mlocal::lib)"
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export PATH := ${HOME}/perl5/bin:${PATH}
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export PERL5LIB := ${HOME}/perl5/lib/perl5:${PERL5LIB}}
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export PERL_LOCAL_LIB_ROOT := ${HOME}/perl5:${PERL_LOCAL_LIB_ROOT}}
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export PERL_MB_OPT := --install_base "${HOME}/perl5"
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export PERL_MM_OPT := INSTALL_BASE=${HOME}/perl5
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## modules to be loaded in sbatch scripts
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CPU_MODULES = gcc/6.2.0 mkl
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GPU_MODULES = cuda-env/8 mkl
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INSTALL_MODULES = cmake perl/5.30.0
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# GPU_MODULES = python-env/3.5.3-ml cuda-env/8 mkl
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# job-specific settings (overwrite if necessary)
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# HPC_EXTRA: additional SBATCH commands
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@ -36,9 +16,6 @@ HPC_NODES = 1
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HPC_DISK = 500
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HPC_QUEUE = serial
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HPC_GPUQUEUE = gpu
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# HPC_MODULES = nlpl-opus python-env/3.4.1 efmaral moses
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# HPC_MODULES = nlpl-opus moses cuda-env marian python-3.5.3-ml
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HPC_MODULES = ${GPU_MODULES}
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HPC_EXTRA =
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MEM = 4g
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@ -47,8 +24,7 @@ WALLTIME = 72
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GPUJOB_HPC_MEM ?= 4g
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# GPU = k80
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GPU = p100
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GPU = v100
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DEVICE = cuda
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LOADCPU = echo "nothing to load"
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LOADGPU = echo "nothing to load"
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@ -57,88 +33,23 @@ LOADMODS = echo "nothing to load"
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WORKHOME = ${PWD}/work
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## anything that needs to be done to load
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## the build environment for specific software
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LOAD_BUILD_ENV = echo "nothing to load"
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LOAD_MARIAN_BUILD_ENV = echo "nothing to load"
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ifeq (${shell hostname -d 2>/dev/null},mahti.csc.fi)
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CSCPROJECT = project_2002688
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# CSCPROJECT = project_2003093
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# CSCPROJECT = project_2002982
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WORKHOME = ${shell realpath ${PWD}/work}
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LOCAL_SCRATCH = /scratch/${CSCPROJECT}
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APPLHOME = /projappl/project_2003093/
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OPUSHOME = /projappl/nlpl/data/OPUS
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MOSESHOME = ${APPLHOME}/install/mosesdecoder
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MOSESSCRIPTS = ${MOSESHOME}/scripts
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EFLOMAL_HOME = ${APPLHOME}/install/eflomal/
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# MARIAN_HOME = ${APPLHOME}/install/marian/build/
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MARIAN_HOME = ${APPLHOME}/install/marian/build-gpu/
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MARIAN = ${MARIAN_HOME}
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SPM_HOME = ${MARIAN_HOME}
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CPU_MODULES = python-env
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GPU_MODULES = cuda
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HPC_QUEUE = medium
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LOADCPU = module load ${CPU_MODULES}
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SUBMIT_PREFIX = submitcpu
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GPU = a100
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HPC_GPUQUEUE = gpusmall
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# HPC_GPUQUEUE = gpumedium
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WALLTIME = 36
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export PATH := ${APPLHOME}/bin:${PATH}
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include lib/env/mahti.mk
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else ifeq (${shell hostname},dx6-ibs-p2)
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GPU = pascal
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APPLHOME = /opt/tools
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WORKHOME = ${shell realpath ${PWD}/work}
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# OPUSHOME = tiedeman@taito.csc.fi:/proj/nlpl/data/OPUS/
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# MOSESHOME = ${APPLHOME}/mosesdecoder
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# MOSESSCRIPTS = ${MOSESHOME}/scripts
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# MARIAN_HOME = ${APPLHOME}/marian/build/
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# MARIAN = ${APPLHOME}/marian/build
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# SUBWORD_HOME = ${APPLHOME}/subword-nmt/subword_nmt
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include lib/env/dx6.mk
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else ifeq (${shell hostname},dx7-nkiel-4gpu)
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GPU = pascal
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APPLHOME = /opt/tools
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WORKHOME = ${shell realpath ${PWD}/work}
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MARIAN_BUILD_OPTIONS += -DCUDA_TOOLKIT_ROOT_DIR=/usr/local/cuda-9.2
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# -DPROTOBUF_LIBRARY=/usr/lib/x86_64-linux-gnu/libprotobuf.so.9 \
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# -DPROTOBUF_INCLUDE_DIR=/usr/include/google/protobuf \
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# -DPROTOBUF_PROTOC_EXECUTABLE=${PWD}/tools/protobuf/src/protoc
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# OPUSHOME = tiedeman@taito.csc.fi:/proj/nlpl/data/OPUS/
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# MOSESHOME = ${APPLHOME}/mosesdecoder
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# MOSESSCRIPTS = ${MOSESHOME}/scripts
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# MARIAN_HOME = ${APPLHOME}/marian/build/
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# MARIAN = ${APPLHOME}/marian/build
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# SUBWORD_HOME = ${APPLHOME}/subword-nmt/subword_nmt
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include lib/env/dx7.mk
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else ifneq ($(wildcard /wrk/tiedeman/research),)
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APPLHOME = /proj/memad/tools
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WORKHOME = /wrk/tiedeman/research/Opus-MT/work
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OPUSHOME = /proj/nlpl/data/OPUS
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MOSESHOME = /proj/nlpl/software/moses/4.0-65c75ff/moses
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MOSESSCRIPTS = ${MOSESHOME}/scripts
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MARIAN_HOME = ${HOME}/appl_taito/tools/marian/build-gpu/
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MARIAN = ${HOME}/appl_taito/tools/marian/build-gpu
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LOADCPU = module load ${CPU_MODULES}
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LOADGPU = module load ${GPU_MODULES}
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LOADMODS = ${LOADGPU}
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include lib/env/taito.mk
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else ifeq (${shell hostname --domain 2>/dev/null},bullx)
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# CSCPROJECT = project_2003288
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CSCPROJECT = project_2002688
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# CSCPROJECT = project_2000309
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# CSCPROJECT = project_2002982
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WORKHOME = ${shell realpath ${PWD}/work}
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APPLHOME = /projappl/project_2001194
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OPUSHOME = /projappl/nlpl/data/OPUS
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MOSESHOME = ${APPLHOME}/mosesdecoder
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MOSESSCRIPTS = ${MOSESHOME}/scripts
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EFLOMAL_HOME = ${APPLHOME}/eflomal/
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MARIAN_HOME = ${APPLHOME}/marian/build/
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MARIAN = ${APPLHOME}/marian/build
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SPM_HOME = ${MARIAN_HOME}
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GPU = v100
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GPU_MODULES = python-env
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CPU_MODULES = python-env
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HPC_QUEUE = small
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LOADCPU = module load ${CPU_MODULES}
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LOADGPU = module load ${GPU_MODULES}
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export PATH := ${APPLHOME}/bin:${PATH}
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include lib/env/puhti.mk
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endif
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@ -223,14 +134,9 @@ MULTEVALHOME = ${APPLHOME}/multeval
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## install pre-requisites
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## TODO:
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## * terashuf (https://github.com/alexandres/terashuf.git)
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## * OpusTools-perl (https://github.com/Helsinki-NLP/OpusTools-perl)
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## * marian-nmt
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## install prerequisites
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PREREQ_TOOLS := $(lastword ${ISO639}) ${ATOOLS} ${PIGZ} ${TERASHUF} ${JQ} ${MARIAN} ${EFLOMAL}
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PREREQ_TOOLS := $(lastword ${ISO639}) ${ATOOLS} ${PIGZ} ${TERASHUF} ${JQ} ${MARIAN} ${EFLOMAL} ${TMX2MOSES}
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PREREQ_PERL := ISO::639::3 ISO::639::5 OPUS::Tools XML::Parser
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PIP := ${shell which pip3 2>/dev/null || echo pip}
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@ -246,11 +152,21 @@ else
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endif
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## setup local Perl environment
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## better install local::lib and put this into your .bashrc:
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##
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## eval "$(perl -I$HOME/perl5/lib/perl5 -Mlocal::lib)"
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export PATH := ${HOME}/perl5/bin:${PATH}
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export PERL5LIB := ${HOME}/perl5/lib/perl5:${PERL5LIB}}
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export PERL_LOCAL_LIB_ROOT := ${HOME}/perl5:${PERL_LOCAL_LIB_ROOT}}
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export PERL_MB_OPT := --install_base "${HOME}/perl5"
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export PERL_MM_OPT := INSTALL_BASE=${HOME}/perl5
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PHONY: install-prerequisites install-prereq install-requirements
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install-prerequisites install-prereq install-requirements:
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if [ `hostname --domain` = "bullx" ]; then \
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module load ${INSTALL_MODULES}; \
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fi
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${PIP} install --user -r requirements.txt
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${MAKE} install-perl-modules
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${MAKE} ${PREREQ_TOOLS}
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@ -276,6 +192,8 @@ ${TOOLSDIR}/pigz/pigz:
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${MAKE} -C ${dir $@}
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${TOOLSDIR}/terashuf/terashuf:
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mkdir -p ${TOOLSDIR}
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cd ${TOOLSDIR} && git clone https://github.com/alexandres/terashuf.git
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${MAKE} -C ${dir $@}
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${TOOLSDIR}/jq/jq:
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@ -290,16 +208,19 @@ ${TOOLSDIR}/jq/jq:
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## file:///opt/intel/documentation_2020/en/mkl/ps2020/get_started.htm
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${TOOLSDIR}/marian-dev/build/marian: ${PROTOC}
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mkdir -p ${TOOLSDIR}
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cd ${TOOLSDIR} && git clone https://github.com/marian-nmt/marian-dev.git
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mkdir -p ${dir $@}
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cd ${dir $@} && cmake -DUSE_SENTENCEPIECE=on ${MARIAN_BUILD_OPTIONS} ..
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cd ${dir $@} && ${LOAD_MARIAN_BUILD_ENV} && cmake -DUSE_SENTENCEPIECE=on ${MARIAN_BUILD_OPTIONS} ..
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${MAKE} -C ${dir $@} -j8
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${TOOLSDIR}/protobuf/bin/protoc:
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cd tools && git clone https://github.com/protocolbuffers/protobuf.git
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cd tools/protobuf && git submodule update --init --recursive
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cd tools/protobuf && ./autogen.sh
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cd tools/protobuf && ./configure --prefix=${TOOLSDIR}/protobuf
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${MAKE} -C tools/protobuf
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mkdir -p ${TOOLSDIR}
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cd ${TOOLSDIR} && git clone https://github.com/protocolbuffers/protobuf.git
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cd ${TOOLSDIR}/protobuf && git submodule update --init --recursive
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cd ${TOOLSDIR}/protobuf && ./autogen.sh
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cd ${TOOLSDIR}/protobuf && ./configure --prefix=${TOOLSDIR}/protobuf
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${MAKE} -C ${TOOLSDIR}/protobuf
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## for Mac users: use gcc to compile eflomal
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##
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@ -318,3 +239,10 @@ ${TOOLSDIR}/eflomal/eflomal:
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${MAKE} -C ${dir $@} all
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cd ${dir $@} && python3 setup.py install --user
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# python3 setup.py install --install-dir ${HOME}/.local
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${TOOLSDIR}/OpusTools-perl/scripts/convert/tmx2moses:
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mkdir -p ${TOOLSDIR}
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cd ${TOOLSDIR} && https://github.com/Helsinki-NLP/OpusTools-perl
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cd ${TOOLSDIR}/OpusTools-perl && perl Makefile.PL
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cd ${TOOLSDIR}/OpusTools-perl && ${MAKE} install
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16
lib/env/dx6.mk
vendored
Normal file
16
lib/env/dx6.mk
vendored
Normal file
@ -0,0 +1,16 @@
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# -*-makefile-*-
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#
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# environment on dx6@UH
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#
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GPU = pascal
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APPLHOME = /opt/tools
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WORKHOME = ${shell realpath ${PWD}/work}
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# OPUSHOME = tiedeman@taito.csc.fi:/proj/nlpl/data/OPUS/
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# MOSESHOME = ${APPLHOME}/mosesdecoder
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# MOSESSCRIPTS = ${MOSESHOME}/scripts
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# MARIAN_HOME = ${APPLHOME}/marian/build/
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# MARIAN = ${APPLHOME}/marian/build
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# SUBWORD_HOME = ${APPLHOME}/subword-nmt/subword_nmt
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19
lib/env/dx7.mk
vendored
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19
lib/env/dx7.mk
vendored
Normal file
@ -0,0 +1,19 @@
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# -*-makefile-*-
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#
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# environment on dx7@UH
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#
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GPU = pascal
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APPLHOME = /opt/tools
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WORKHOME = ${shell realpath ${PWD}/work}
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MARIAN_BUILD_OPTIONS += -DCUDA_TOOLKIT_ROOT_DIR=/usr/local/cuda-9.2
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# -DPROTOBUF_LIBRARY=/usr/lib/x86_64-linux-gnu/libprotobuf.so.9 \
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# -DPROTOBUF_INCLUDE_DIR=/usr/include/google/protobuf \
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# -DPROTOBUF_PROTOC_EXECUTABLE=${PWD}/tools/protobuf/src/protoc
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# OPUSHOME = tiedeman@taito.csc.fi:/proj/nlpl/data/OPUS/
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# MOSESHOME = ${APPLHOME}/mosesdecoder
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# MOSESSCRIPTS = ${MOSESHOME}/scripts
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# MARIAN_HOME = ${APPLHOME}/marian/build/
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# MARIAN = ${APPLHOME}/marian/build
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# SUBWORD_HOME = ${APPLHOME}/subword-nmt/subword_nmt
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53
lib/env/mahti.mk
vendored
Normal file
53
lib/env/mahti.mk
vendored
Normal file
@ -0,0 +1,53 @@
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# -*-makefile-*-
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#
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# environment on mathi@CSC
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#
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CSCPROJECT = project_2002688
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# CSCPROJECT = project_2003093
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# CSCPROJECT = project_2002982
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WORKHOME = ${shell realpath ${PWD}/work}
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LOCAL_SCRATCH = /scratch/${CSCPROJECT}
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APPLHOME = /projappl/project_2003093/
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OPUSHOME = /projappl/nlpl/data/OPUS
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MOSESHOME = ${APPLHOME}/install/mosesdecoder
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MOSESSCRIPTS = ${MOSESHOME}/scripts
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EFLOMAL_HOME = ${APPLHOME}/install/eflomal/
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# MARIAN_HOME = ${APPLHOME}/install/marian/build/
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MARIAN_HOME = ${APPLHOME}/install/marian-dev/build/
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MARIAN = ${MARIAN_HOME}
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SPM_HOME = ${MARIAN_HOME}
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CPU_MODULES = gcc/10.3.0 openblas/0.3.14-omp openmpi python-env
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GPU_MODULES = gcc/10.3.0 cuda/11.4.2 cudnn/8.0.4.30-11.0-linux-x64 openblas/0.3.14-omp openmpi/4.0.5-cuda python-env
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HPC_QUEUE = medium
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LOADCPU = module load ${CPU_MODULES}
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SUBMIT_PREFIX = submitcpu
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GPU = a100
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HPC_GPUQUEUE = gpusmall
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# HPC_GPUQUEUE = gpumedium
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WALLTIME = 36
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export PATH := ${APPLHOME}/bin:${PATH}
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## setup for compiling marian-nmt
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MARIAN_BUILD_MODULES = gcc/10.3.0 cuda/11.4.2 cudnn/8.0.4.30-11.0-linux-x64 cmake/3.18.4 openblas/0.3.14-omp openmpi/4.0.5-cuda python-env
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LOAD_MARIAN_BUILD_ENV = module purge && module load ${MARIAN_BUILD_MODULES}
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MARIAN_BUILD_OPTIONS = -DTcmalloc_INCLUDE_DIR=/appl/spack/v016/install-tree/gcc-10.3.0/gperftools-2.7-ibnifm/include \
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-DTcmalloc_LIBRARY=/appl/spack/v016/install-tree/gcc-10.3.0/gperftools-2.7-ibnifm/lib/libtcmalloc.so \
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-DTCMALLOC_LIB=/appl/spack/v016/install-tree/gcc-10.3.0/gperftools-2.7-ibnifm/lib/libtcmalloc.so \
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-DCUDNN=ON \
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-DCOMPILE_CPU=ON \
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-DCOMPILE_CUDA_SM80=ON \
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-DCOMPILE_CUDA=ON \
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-DCOMPILE_CUDA_SM35=OFF \
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-DCOMPILE_CUDA_SM50=OFF \
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-DCOMPILE_CUDA_SM60=OFF \
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-DCOMPILE_CUDA_SM70=OFF \
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-DCOMPILE_CUDA_SM75=OFF \
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-DCOMPILE_AVX512=OFF \
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-DUSE_MPI=ON \
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-DUSE_DOXYGEN=OFF \
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-DCOMPILE_TURING=OFF \
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-DCOMPILE_VOLTA=OFF \
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-DCOMPILE_PASCAL=OFF
|
51
lib/env/puhti.mk
vendored
Normal file
51
lib/env/puhti.mk
vendored
Normal file
@ -0,0 +1,51 @@
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# -*-makefile-*-
|
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#
|
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# environment on puhti@CSC
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#
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||||
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CPU_MODULES = gcc/6.2.0 mkl
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GPU_MODULES = cuda-env/8 mkl
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|
||||
|
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|
||||
|
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# CSCPROJECT = project_2003288
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CSCPROJECT = project_2002688
|
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# CSCPROJECT = project_2000309
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# CSCPROJECT = project_2002982
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WORKHOME = ${shell realpath ${PWD}/work}
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APPLHOME = /projappl/project_2001194
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OPUSHOME = /projappl/nlpl/data/OPUS
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MOSESHOME = ${APPLHOME}/mosesdecoder
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MOSESSCRIPTS = ${MOSESHOME}/scripts
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EFLOMAL_HOME = ${APPLHOME}/eflomal/
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MARIAN_HOME = ${APPLHOME}/marian/build/
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MARIAN = ${APPLHOME}/marian/build
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SPM_HOME = ${MARIAN_HOME}
|
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GPU = v100
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GPU_MODULES = python-env
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CPU_MODULES = python-env
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HPC_QUEUE = small
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LOADCPU = module load ${CPU_MODULES}
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LOADGPU = module load ${GPU_MODULES}
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export PATH := ${APPLHOME}/bin:${PATH}
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|
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BUILD_MODULES = cmake perl/5.30.0
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LOAD_BUILD_ENV = module load ${BUILD_MODULES}
|
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|
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MARIAN_BUILD_MODULES = gcc/8.3.0 cuda/10.1.168 cudnn/7.6.1.34-10.1 intel-mkl/2019.0.4 cmake/3.18.2
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LOAD_MARIAN_BUILD_ENV = module purge && module load ${MARIAN_BUILD_MODULES}
|
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MARIAN_BUILD_OPTIONS = -DTcmalloc_INCLUDE_DIR=/appl/spack/install-tree/gcc-8.3.0/gperftools-2.7-5w7w2c/include \
|
||||
-DTcmalloc_LIBRARY=/appl/spack/install-tree/gcc-8.3.0/gperftools-2.7-5w7w2c/lib/libtcmalloc.so \
|
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-DTCMALLOC_LIB=/appl/spack/install-tree/gcc-8.3.0/gperftools-2.7-5w7w2c/lib/libtcmalloc.so \
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-DCUDNN=ON \
|
||||
-DCOMPILE_CPU=ON \
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||||
-DCOMPILE_CUDA=ON \
|
||||
-DCOMPILE_CUDA_SM35=OFF \
|
||||
-DCOMPILE_CUDA_SM50=OFF \
|
||||
-DCOMPILE_CUDA_SM60=OFF \
|
||||
-DCOMPILE_CUDA_SM70=ON \
|
||||
-DCOMPILE_CUDA_SM75=OFF \
|
||||
-DUSE_DOXYGEN=OFF
|
||||
|
24
lib/env/taito.mk
vendored
Normal file
24
lib/env/taito.mk
vendored
Normal file
@ -0,0 +1,24 @@
|
||||
# -*-makefile-*-
|
||||
#
|
||||
# environment on taito@CSC
|
||||
#
|
||||
|
||||
|
||||
CPU_MODULES = gcc/6.2.0 mkl
|
||||
GPU_MODULES = cuda-env/8 mkl
|
||||
|
||||
|
||||
APPLHOME = /proj/memad/tools
|
||||
WORKHOME = /wrk/tiedeman/research/Opus-MT/work
|
||||
OPUSHOME = /proj/nlpl/data/OPUS
|
||||
MOSESHOME = /proj/nlpl/software/moses/4.0-65c75ff/moses
|
||||
MOSESSCRIPTS = ${MOSESHOME}/scripts
|
||||
MARIAN_HOME = ${HOME}/appl_taito/tools/marian/build-gpu/
|
||||
MARIAN = ${HOME}/appl_taito/tools/marian/build-gpu
|
||||
LOADCPU = module load ${CPU_MODULES}
|
||||
LOADGPU = module load ${GPU_MODULES}
|
||||
LOADMODS = ${LOADGPU}
|
||||
GPU = p100
|
||||
|
||||
|
||||
|
Loading…
Reference in New Issue
Block a user