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698 lines
25 KiB
C++
698 lines
25 KiB
C++
// Copyright (C) 2005-2006 Douglas Gregor <doug.gregor -at- gmail.com>.
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// Use, modification and distribution is subject to the Boost Software
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// License, Version 1.0. (See accompanying file LICENSE_1_0.txt or copy at
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// http://www.boost.org/LICENSE_1_0.txt)
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// Message Passing Interface 1.1 -- Section 4. MPI Collectives
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/** @file collectives.hpp
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*
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* This header contains MPI collective operations, which implement
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* various parallel algorithms that require the coordination of all
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* processes within a communicator. The header @c collectives_fwd.hpp
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* provides forward declarations for each of these operations. To
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* include only specific collective algorithms, use the headers @c
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* boost/mpi/collectives/algorithm_name.hpp.
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*/
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#ifndef BOOST_MPI_COLLECTIVES_HPP
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#define BOOST_MPI_COLLECTIVES_HPP
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#include <boost/mpi/communicator.hpp>
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#include <boost/mpi/inplace.hpp>
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#include <vector>
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namespace boost { namespace mpi {
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/**
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* @brief Gather the values stored at every process into vectors of
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* values from each process.
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*
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* @c all_gather is a collective algorithm that collects the values
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* stored at each process into a vector of values indexed by the
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* process number they came from. The type @c T of the values may be
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* any type that is serializable or has an associated MPI data type.
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*
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* When the type @c T has an associated MPI data type, this routine
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* invokes @c MPI_Allgather to gather the values.
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*
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* @param comm The communicator over which the all-gather will
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* occur.
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*
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* @param in_value The value to be transmitted by each process. To
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* gather an array of values, @c in_values points to the @c n local
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* values to be transmitted.
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*
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* @param out_values A vector or pointer to storage that will be
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* populated with the values from each process, indexed by the
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* process ID number. If it is a vector, the vector will be resized
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* accordingly.
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*/
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template<typename T>
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void
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all_gather(const communicator& comm, const T& in_value,
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std::vector<T>& out_values);
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/**
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* \overload
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*/
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template<typename T>
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void
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all_gather(const communicator& comm, const T& in_value, T* out_values);
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/**
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* \overload
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*/
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template<typename T>
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void
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all_gather(const communicator& comm, const T* in_values, int n,
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std::vector<T>& out_values);
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/**
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* \overload
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*/
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template<typename T>
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void
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all_gather(const communicator& comm, const T* in_values, int n, T* out_values);
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/**
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* @brief Combine the values stored by each process into a single
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* value available to all processes.
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*
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* @c all_reduce is a collective algorithm that combines the values
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* stored by each process into a single value available to all
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* processes. The values are combined in a user-defined way,
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* specified via a function object. The type @c T of the values may
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* be any type that is serializable or has an associated MPI data
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* type. One can think of this operation as a @c all_gather, followed
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* by an @c std::accumulate() over the gather values and using the
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* operation @c op.
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*
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* When the type @c T has an associated MPI data type, this routine
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* invokes @c MPI_Allreduce to perform the reduction. If possible,
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* built-in MPI operations will be used; otherwise, @c all_reduce()
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* will create a custom MPI_Op for the call to MPI_Allreduce.
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*
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* @param comm The communicator over which the reduction will
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* occur.
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* @param value The local value to be combined with the local
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* values of every other process. For reducing arrays, @c in_values
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* is a pointer to the local values to be reduced and @c n is the
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* number of values to reduce. See @c reduce for more information.
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*
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* If wrapped in a @c inplace_t object, combine the usage of both
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* input and $c out_value and the local value will be overwritten
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* (a convenience function @c inplace is provided for the wrapping).
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*
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* @param out_value Will receive the result of the reduction
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* operation. If this parameter is omitted, the outgoing value will
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* instead be returned.
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*
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* @param op The binary operation that combines two values of type
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* @c T and returns a third value of type @c T. For types @c T that has
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* ssociated MPI data types, @c op will either be translated into
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* an @c MPI_Op (via @c MPI_Op_create) or, if possible, mapped
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* directly to a built-in MPI operation. See @c is_mpi_op in the @c
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* operations.hpp header for more details on this mapping. For any
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* non-built-in operation, commutativity will be determined by the
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* @c is_commmutative trait (also in @c operations.hpp): users are
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* encouraged to mark commutative operations as such, because it
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* gives the implementation additional lattitude to optimize the
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* reduction operation.
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*
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* @param n Indicated the size of the buffers of array type.
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* @returns If no @p out_value parameter is supplied, returns the
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* result of the reduction operation.
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*/
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template<typename T, typename Op>
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void
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all_reduce(const communicator& comm, const T* value, int n, T* out_value,
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Op op);
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/**
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* \overload
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*/
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template<typename T, typename Op>
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void
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all_reduce(const communicator& comm, const T& value, T& out_value, Op op);
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/**
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* \overload
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*/
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template<typename T, typename Op>
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T all_reduce(const communicator& comm, const T& value, Op op);
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/**
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* \overload
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*/
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template<typename T, typename Op>
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void
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all_reduce(const communicator& comm, inplace_t<T*> value, int n,
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Op op);
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/**
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* \overload
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*/
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template<typename T, typename Op>
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void
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all_reduce(const communicator& comm, inplace_t<T> value, Op op);
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/**
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* @brief Send data from every process to every other process.
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*
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* @c all_to_all is a collective algorithm that transmits @c p values
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* from every process to every other process. On process i, jth value
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* of the @p in_values vector is sent to process j and placed in the
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* ith position of the @p out_values vector in process @p j. The type
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* @c T of the values may be any type that is serializable or has an
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* associated MPI data type. If @c n is provided, then arrays of @p n
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* values will be transferred from one process to another.
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*
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* When the type @c T has an associated MPI data type, this routine
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* invokes @c MPI_Alltoall to scatter the values.
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*
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* @param comm The communicator over which the all-to-all
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* communication will occur.
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*
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* @param in_values A vector or pointer to storage that contains
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* the values to send to each process, indexed by the process ID
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* number.
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*
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* @param out_values A vector or pointer to storage that will be
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* updated to contain the values received from other processes. The
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* jth value in @p out_values will come from the procss with rank j.
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*/
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template<typename T>
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void
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all_to_all(const communicator& comm, const std::vector<T>& in_values,
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std::vector<T>& out_values);
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/**
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* \overload
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*/
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template<typename T>
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void all_to_all(const communicator& comm, const T* in_values, T* out_values);
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/**
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* \overload
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*/
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template<typename T>
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void
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all_to_all(const communicator& comm, const std::vector<T>& in_values, int n,
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std::vector<T>& out_values);
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/**
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* \overload
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*/
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template<typename T>
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void
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all_to_all(const communicator& comm, const T* in_values, int n, T* out_values);
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/**
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* @brief Broadcast a value from a root process to all other
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* processes.
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*
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* @c broadcast is a collective algorithm that transfers a value from
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* an arbitrary @p root process to every other process that is part of
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* the given communicator. The @c broadcast algorithm can transmit any
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* Serializable value, values that have associated MPI data types,
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* packed archives, skeletons, and the content of skeletons; see the
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* @c send primitive for communicators for a complete list. The type
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* @c T shall be the same for all processes that are a part of the
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* communicator @p comm, unless packed archives are being transferred:
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* with packed archives, the root sends a @c packed_oarchive or @c
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* packed_skeleton_oarchive whereas the other processes receive a
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* @c packed_iarchive or @c packed_skeleton_iarchve, respectively.
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*
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* When the type @c T has an associated MPI data type, this routine
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* invokes @c MPI_Bcast to perform the broadcast.
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*
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* @param comm The communicator over which the broadcast will
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* occur.
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*
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* @param value The value (or values, if @p n is provided) to be
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* transmitted (if the rank of @p comm is equal to @p root) or
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* received (if the rank of @p comm is not equal to @p root). When
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* the @p value is a @c skeleton_proxy, only the skeleton of the
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* object will be broadcast. In this case, the @p root will build a
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* skeleton from the object help in the proxy and all of the
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* non-roots will reshape the objects held in their proxies based on
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* the skeleton sent from the root.
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*
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* @param n When supplied, the number of values that the pointer @p
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* values points to, for broadcasting an array of values. The value
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* of @p n must be the same for all processes in @p comm.
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*
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* @param root The rank/process ID of the process that will be
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* transmitting the value.
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*/
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template<typename T>
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void broadcast(const communicator& comm, T& value, int root);
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/**
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* \overload
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*/
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template<typename T>
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void broadcast(const communicator& comm, T* values, int n, int root);
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/**
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* \overload
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*/
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template<typename T>
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void broadcast(const communicator& comm, skeleton_proxy<T>& value, int root);
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/**
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* \overload
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*/
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template<typename T>
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void
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broadcast(const communicator& comm, const skeleton_proxy<T>& value, int root);
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/**
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* @brief Gather the values stored at every process into a vector at
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* the root process.
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*
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* @c gather is a collective algorithm that collects the values
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* stored at each process into a vector of values at the @p root
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* process. This vector is indexed by the process number that the
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* value came from. The type @c T of the values may be any type that
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* is serializable or has an associated MPI data type.
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*
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* When the type @c T has an associated MPI data type, this routine
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* invokes @c MPI_Gather to gather the values.
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*
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* @param comm The communicator over which the gather will occur.
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*
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* @param in_value The value to be transmitted by each process. For
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* gathering arrays of values, @c in_values points to storage for
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* @c n*comm.size() values.
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*
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* @param out_values A vector or pointer to storage that will be
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* populated with the values from each process, indexed by the
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* process ID number. If it is a vector, it will be resized
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* accordingly. For non-root processes, this parameter may be
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* omitted. If it is still provided, however, it will be unchanged.
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*
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* @param root The process ID number that will collect the
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* values. This value must be the same on all processes.
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*/
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template<typename T>
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void
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gather(const communicator& comm, const T& in_value, std::vector<T>& out_values,
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int root);
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/**
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* \overload
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*/
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template<typename T>
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void
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gather(const communicator& comm, const T& in_value, T* out_values, int root);
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/**
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* \overload
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*/
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template<typename T>
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void gather(const communicator& comm, const T& in_value, int root);
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/**
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* \overload
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*/
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template<typename T>
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void
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gather(const communicator& comm, const T* in_values, int n,
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std::vector<T>& out_values, int root);
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/**
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* \overload
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*/
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template<typename T>
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void
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gather(const communicator& comm, const T* in_values, int n, T* out_values,
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int root);
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/**
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* \overload
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*/
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template<typename T>
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void gather(const communicator& comm, const T* in_values, int n, int root);
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/**
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* @brief Similar to boost::mpi::gather with the difference that the number
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* of values to be send by non-root processes can vary.
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*
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* @param comm The communicator over which the gather will occur.
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*
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* @param in_values The array of values to be transmitted by each process.
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*
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* @param in_size For each non-root process this specifies the size
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* of @p in_values.
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*
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* @param out_values A pointer to storage that will be populated with
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* the values from each process. For non-root processes, this parameter
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* may be omitted. If it is still provided, however, it will be unchanged.
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*
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* @param sizes A vector containing the number of elements each non-root
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* process will send.
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*
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* @param displs A vector such that the i-th entry specifies the
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* displacement (relative to @p out_values) from which to take the ingoing
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* data at the @p root process. Overloaded versions for which @p displs is
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* omitted assume that the data is to be placed contiguously at the root process.
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*
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* @param root The process ID number that will collect the
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* values. This value must be the same on all processes.
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*/
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template<typename T>
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void
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gatherv(const communicator& comm, const std::vector<T>& in_values,
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T* out_values, const std::vector<int>& sizes, const std::vector<int>& displs,
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int root);
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/**
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* \overload
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*/
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template<typename T>
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void
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gatherv(const communicator& comm, const T* in_values, int in_size,
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T* out_values, const std::vector<int>& sizes, const std::vector<int>& displs,
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int root);
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/**
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* \overload
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*/
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template<typename T>
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void gatherv(const communicator& comm, const std::vector<T>& in_values, int root);
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/**
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* \overload
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*/
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template<typename T>
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void gatherv(const communicator& comm, const T* in_values, int in_size, int root);
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/**
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* \overload
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*/
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template<typename T>
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void
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gatherv(const communicator& comm, const T* in_values, int in_size,
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T* out_values, const std::vector<int>& sizes, int root);
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/**
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* \overload
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*/
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template<typename T>
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void
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gatherv(const communicator& comm, const std::vector<T>& in_values,
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T* out_values, const std::vector<int>& sizes, int root);
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/**
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* @brief Scatter the values stored at the root to all processes
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* within the communicator.
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*
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* @c scatter is a collective algorithm that scatters the values
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* stored in the @p root process (inside a vector) to all of the
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* processes in the communicator. The vector @p out_values (only
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* significant at the @p root) is indexed by the process number to
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* which the corresponding value will be sent. The type @c T of the
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* values may be any type that is serializable or has an associated
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* MPI data type.
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*
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* When the type @c T has an associated MPI data type, this routine
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* invokes @c MPI_Scatter to scatter the values.
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*
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* @param comm The communicator over which the scatter will occur.
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*
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* @param in_values A vector or pointer to storage that will contain
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* the values to send to each process, indexed by the process rank.
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* For non-root processes, this parameter may be omitted. If it is
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* still provided, however, it will be unchanged.
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*
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* @param out_value The value received by each process. When
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* scattering an array of values, @p out_values points to the @p n
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* values that will be received by each process.
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*
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* @param root The process ID number that will scatter the
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* values. This value must be the same on all processes.
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*/
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template<typename T>
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void
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scatter(const communicator& comm, const std::vector<T>& in_values, T& out_value,
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int root);
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/**
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* \overload
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*/
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template<typename T>
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void
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scatter(const communicator& comm, const T* in_values, T& out_value, int root);
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/**
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* \overload
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*/
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template<typename T>
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void scatter(const communicator& comm, T& out_value, int root);
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/**
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* \overload
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*/
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template<typename T>
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void
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scatter(const communicator& comm, const std::vector<T>& in_values,
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T* out_values, int n, int root);
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/**
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* \overload
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*/
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template<typename T>
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void
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scatter(const communicator& comm, const T* in_values, T* out_values, int n,
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int root);
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/**
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* \overload
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*/
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template<typename T>
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void scatter(const communicator& comm, T* out_values, int n, int root);
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/**
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* @brief Similar to boost::mpi::scatter with the difference that the number
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* of values stored at the root process does not need to be a multiple of
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* the communicator's size.
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*
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* @param comm The communicator over which the scatter will occur.
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*
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* @param in_values A vector or pointer to storage that will contain
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* the values to send to each process, indexed by the process rank.
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* For non-root processes, this parameter may be omitted. If it is
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* still provided, however, it will be unchanged.
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*
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* @param sizes A vector containing the number of elements each non-root
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* process will receive.
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*
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* @param displs A vector such that the i-th entry specifies the
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* displacement (relative to @p in_values) from which to take the outgoing
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* data to process i. Overloaded versions for which @p displs is omitted
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* assume that the data is contiguous at the @p root process.
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*
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* @param out_values The array of values received by each process.
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*
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* @param out_size For each non-root process this will contain the size
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* of @p out_values.
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*
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* @param root The process ID number that will scatter the
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* values. This value must be the same on all processes.
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*/
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template<typename T>
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void
|
|
scatterv(const communicator& comm, const std::vector<T>& in_values,
|
|
const std::vector<int>& sizes, const std::vector<int>& displs,
|
|
T* out_values, int out_size, int root);
|
|
|
|
/**
|
|
* \overload
|
|
*/
|
|
template<typename T>
|
|
void
|
|
scatterv(const communicator& comm, const T* in_values,
|
|
const std::vector<int>& sizes, const std::vector<int>& displs,
|
|
T* out_values, int out_size, int root);
|
|
|
|
/**
|
|
* \overload
|
|
*/
|
|
template<typename T>
|
|
void scatterv(const communicator& comm, T* out_values, int out_size, int root);
|
|
|
|
/**
|
|
* \overload
|
|
*/
|
|
template<typename T>
|
|
void
|
|
scatterv(const communicator& comm, const T* in_values,
|
|
const std::vector<int>& sizes, T* out_values, int root);
|
|
|
|
/**
|
|
* \overload
|
|
*/
|
|
template<typename T>
|
|
void
|
|
scatterv(const communicator& comm, const std::vector<T>& in_values,
|
|
const std::vector<int>& sizes, T* out_values, int root);
|
|
|
|
/**
|
|
* @brief Combine the values stored by each process into a single
|
|
* value at the root.
|
|
*
|
|
* @c reduce is a collective algorithm that combines the values
|
|
* stored by each process into a single value at the @c root. The
|
|
* values can be combined arbitrarily, specified via a function
|
|
* object. The type @c T of the values may be any type that is
|
|
* serializable or has an associated MPI data type. One can think of
|
|
* this operation as a @c gather to the @p root, followed by an @c
|
|
* std::accumulate() over the gathered values and using the operation
|
|
* @c op.
|
|
*
|
|
* When the type @c T has an associated MPI data type, this routine
|
|
* invokes @c MPI_Reduce to perform the reduction. If possible,
|
|
* built-in MPI operations will be used; otherwise, @c reduce() will
|
|
* create a custom MPI_Op for the call to MPI_Reduce.
|
|
*
|
|
* @param comm The communicator over which the reduction will
|
|
* occur.
|
|
*
|
|
* @param in_value The local value to be combined with the local
|
|
* values of every other process. For reducing arrays, @c in_values
|
|
* contains a pointer to the local values. In this case, @c n is
|
|
* the number of values that will be reduced. Reduction occurs
|
|
* independently for each of the @p n values referenced by @p
|
|
* in_values, e.g., calling reduce on an array of @p n values is
|
|
* like calling @c reduce @p n separate times, one for each
|
|
* location in @p in_values and @p out_values.
|
|
*
|
|
* @param out_value Will receive the result of the reduction
|
|
* operation, but only for the @p root process. Non-root processes
|
|
* may omit if parameter; if they choose to supply the parameter,
|
|
* it will be unchanged. For reducing arrays, @c out_values
|
|
* contains a pointer to the storage for the output values.
|
|
*
|
|
* @param op The binary operation that combines two values of type
|
|
* @c T into a third value of type @c T. For types @c T that has
|
|
* ssociated MPI data types, @c op will either be translated into
|
|
* an @c MPI_Op (via @c MPI_Op_create) or, if possible, mapped
|
|
* directly to a built-in MPI operation. See @c is_mpi_op in the @c
|
|
* operations.hpp header for more details on this mapping. For any
|
|
* non-built-in operation, commutativity will be determined by the
|
|
* @c is_commmutative trait (also in @c operations.hpp): users are
|
|
* encouraged to mark commutative operations as such, because it
|
|
* gives the implementation additional lattitude to optimize the
|
|
* reduction operation.
|
|
*
|
|
* @param root The process ID number that will receive the final,
|
|
* combined value. This value must be the same on all processes.
|
|
*/
|
|
template<typename T, typename Op>
|
|
void
|
|
reduce(const communicator& comm, const T& in_value, T& out_value, Op op,
|
|
int root);
|
|
|
|
/**
|
|
* \overload
|
|
*/
|
|
template<typename T, typename Op>
|
|
void reduce(const communicator& comm, const T& in_value, Op op, int root);
|
|
|
|
/**
|
|
* \overload
|
|
*/
|
|
template<typename T, typename Op>
|
|
void
|
|
reduce(const communicator& comm, const T* in_values, int n, T* out_values,
|
|
Op op, int root);
|
|
|
|
/**
|
|
* \overload
|
|
*/
|
|
template<typename T, typename Op>
|
|
void
|
|
reduce(const communicator& comm, const T* in_values, int n, Op op, int root);
|
|
|
|
/**
|
|
* @brief Compute a prefix reduction of values from all processes in
|
|
* the communicator.
|
|
*
|
|
* @c scan is a collective algorithm that combines the values stored
|
|
* by each process with the values of all processes with a smaller
|
|
* rank. The values can be arbitrarily combined, specified via a
|
|
* function object @p op. The type @c T of the values may be any type
|
|
* that is serializable or has an associated MPI data type. One can
|
|
* think of this operation as a @c gather to some process, followed
|
|
* by an @c std::prefix_sum() over the gathered values using the
|
|
* operation @c op. The ith process returns the ith value emitted by
|
|
* @c std::prefix_sum().
|
|
*
|
|
* When the type @c T has an associated MPI data type, this routine
|
|
* invokes @c MPI_Scan to perform the reduction. If possible,
|
|
* built-in MPI operations will be used; otherwise, @c scan() will
|
|
* create a custom @c MPI_Op for the call to MPI_Scan.
|
|
*
|
|
* @param comm The communicator over which the prefix reduction
|
|
* will occur.
|
|
*
|
|
* @param in_value The local value to be combined with the local
|
|
* values of other processes. For the array variant, the @c
|
|
* in_values parameter points to the @c n local values that will be
|
|
* combined.
|
|
*
|
|
* @param out_value If provided, the ith process will receive the
|
|
* value @c op(in_value[0], op(in_value[1], op(..., in_value[i])
|
|
* ... )). For the array variant, @c out_values contains a pointer
|
|
* to storage for the @c n output values. The prefix reduction
|
|
* occurs independently for each of the @p n values referenced by
|
|
* @p in_values, e.g., calling scan on an array of @p n values is
|
|
* like calling @c scan @p n separate times, one for each location
|
|
* in @p in_values and @p out_values.
|
|
*
|
|
* @param op The binary operation that combines two values of type
|
|
* @c T into a third value of type @c T. For types @c T that has
|
|
* ssociated MPI data types, @c op will either be translated into
|
|
* an @c MPI_Op (via @c MPI_Op_create) or, if possible, mapped
|
|
* directly to a built-in MPI operation. See @c is_mpi_op in the @c
|
|
* operations.hpp header for more details on this mapping. For any
|
|
* non-built-in operation, commutativity will be determined by the
|
|
* @c is_commmutative trait (also in @c operations.hpp).
|
|
*
|
|
* @returns If no @p out_value parameter is provided, returns the
|
|
* result of prefix reduction.
|
|
*/
|
|
template<typename T, typename Op>
|
|
void
|
|
scan(const communicator& comm, const T& in_value, T& out_value, Op op);
|
|
|
|
/**
|
|
* \overload
|
|
*/
|
|
template<typename T, typename Op>
|
|
T
|
|
scan(const communicator& comm, const T& in_value, Op op);
|
|
|
|
/**
|
|
* \overload
|
|
*/
|
|
template<typename T, typename Op>
|
|
void
|
|
scan(const communicator& comm, const T* in_values, int n, T* out_values, Op op);
|
|
|
|
} } // end namespace boost::mpi
|
|
#endif // BOOST_MPI_COLLECTIVES_HPP
|
|
|
|
#ifndef BOOST_MPI_COLLECTIVES_FORWARD_ONLY
|
|
// Include implementations of each of the collectives
|
|
# include <boost/mpi/collectives/all_gather.hpp>
|
|
# include <boost/mpi/collectives/all_reduce.hpp>
|
|
# include <boost/mpi/collectives/all_to_all.hpp>
|
|
# include <boost/mpi/collectives/broadcast.hpp>
|
|
# include <boost/mpi/collectives/gather.hpp>
|
|
# include <boost/mpi/collectives/gatherv.hpp>
|
|
# include <boost/mpi/collectives/scatter.hpp>
|
|
# include <boost/mpi/collectives/scatterv.hpp>
|
|
# include <boost/mpi/collectives/reduce.hpp>
|
|
# include <boost/mpi/collectives/scan.hpp>
|
|
#endif
|
|
|