Support for Python libraries like numpy (#7678)

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Jaroslav Tulach 2023-08-30 06:10:18 +02:00 committed by GitHub
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7 changed files with 283 additions and 117 deletions

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@ -923,6 +923,7 @@
- [Only use types as State keys][7585]
- [Allow Java Enums in case of branches][7607]
- [Notification about the project rename action][7613]
- [Use `numpy` & co. from Enso!][7678]
[3227]: https://github.com/enso-org/enso/pull/3227
[3248]: https://github.com/enso-org/enso/pull/3248
@ -1057,6 +1058,7 @@
[7585]: https://github.com/enso-org/enso/pull/7585
[7607]: https://github.com/enso-org/enso/pull/7607
[7613]: https://github.com/enso-org/enso/pull/7613
[7678]: https://github.com/enso-org/enso/pull/7678
# Enso 2.0.0-alpha.18 (2021-10-12)

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@ -24,3 +24,5 @@ It also provides language-specific documentation for the various supported
polyglot languages. These are as follows:
- [**Java:**](./java.md) Information specific to the Java polyglot bindings.
- [**Python:**](./python.md) Information specific to the Python polyglot
bindings.

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@ -161,7 +161,7 @@ the language-specific documentation for details.
## Embedded Syntax
The term "Embedded Syntax" is our terminology for the ability to use foreign
language syntaxes from directly inside `.enso` files. This system builds upon
language syntaxes directly from inside `.enso` files. This system builds upon
the more generic mechanisms used by the [polyglot FFI](#the-polyglot-ffi) to
provide a truly seamless user experience.
@ -169,14 +169,14 @@ provide a truly seamless user experience.
A polyglot block is introduced as follows:
- The `polyglot` keyword starts a block.
- This must be followed by a language identifier (e.g. `java`).
- The `foreign` keyword starts a block.
- This must be followed by a language identifier (e.g. `python`).
- After the language identifier, the remaining syntax behaves like it is an Enso
function definition until the `=`.
- After the `=`, the user may write their foreign code.
- After the `=`, the user may write their foreign code as a string.
```ruby
polyglot python concat a b =
foreign python concat a b = """
def concat(a, b):
str(a) + str(b)
```

72
docs/polyglot/python.md Normal file
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@ -0,0 +1,72 @@
---
layout: developer-doc
title: Polyglot Python
category: polyglot
tags: [polyglot, python]
order: 4
---
# Polyglot Python
This document provides practical example showing polyglot interoperability with
Python in the runtime. Please familiarise yourself with the general operation of
[polyglot bindings](./polyglot-bindings.md).
<!-- MarkdownTOC levels="2,3" autolink="true" -->
- [Polyglot Library System](#polyglot-library-system)
- [Using Python Libraries](#using-python-libraries)
<!-- /MarkdownTOC -->
## Polyglot Library System
There is a support for using any Python library from Enso. Steps to include
`numpy` in a new Enso project follows:
```bash
$ enso-engine*/bin/enso --new numenso
$ find numenso/
numenso/
numenso/src
numenso/src/Main.enso
numenso/package.yaml
$ mkdir numenso/polyglot
$ graalvm/bin/gu install python
$ graalvm/bin/graalpy -m venv numenso/polyglot/python
$ ./numenso/polyglot/python/bin/graalpy -m pip install numpy
Successfully installed numpy-1.23.5
```
The above steps instruct Enso to create a new project in `numenso` directory.
Then they create Python virtual environment in `numenso/polyglot/python/` dir -
e.g. in the
[standard location for polyglot](../distribution/packaging.md#the-polyglot-directory)
components of an Enso project. As a last step we activate the virtual
environment and use `pip` manager to install `numpy` library.
## Using Python Libraries
As soon as a library is installed into the
[polyglot directory](#polyglot-library-system) it can be used via the
[embedded syntax](polyglot-bindings.md#embedded-syntax):
```ruby
foreign python random_array s = """
import numpy
return numpy.random.normal(size=s)
main = random_array 10
```
Let's modify the `numenso/src/Main.enso` to use `numpy.random.normal` as shown
above. Then we can simply execute the project and obtain a `numpy` array as a
result:
```bash
$ enso-engine*/bin/enso --run numenso
array([-0.51884419, -0.23670113, -1.20493508, -0.86008709, 0.59403118,
-0.171484 , -1.19455596, -0.30096434, -0.69762239, -0.11411331])
```
The same steps can be applied to any Graal Python supported library.

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@ -8,7 +8,7 @@ import org.enso.polyglot.debugger.{
import org.enso.polyglot.{HostAccessFactory, PolyglotContext, RuntimeOptions}
import org.graalvm.polyglot.Context
import java.io.{InputStream, OutputStream}
import java.io.{File, InputStream, OutputStream}
/** Utility class for creating Graal polyglot contexts.
*/
@ -49,7 +49,7 @@ class ContextFactory {
executionEnvironment.foreach { name =>
options.put("enso.ExecutionEnvironment", name)
}
val context = Context
val builder = Context
.newBuilder()
.allowExperimentalOptions(true)
.allowAllAccess(true)
@ -88,7 +88,16 @@ class ContextFactory {
.logHandler(
JavaLoggingLogHandler.create(JavaLoggingLogHandler.defaultLevelMapping)
)
.build
new PolyglotContext(context)
val graalpy = new File(
new File(
new File(new File(new File(projectRoot), "polyglot"), "python"),
"bin"
),
"graalpy"
);
if (graalpy.exists()) {
builder.option("python.Executable", graalpy.getAbsolutePath());
}
new PolyglotContext(builder.build)
}
}

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@ -1,5 +1,15 @@
package org.enso.interpreter.epb.node;
import java.util.Arrays;
import java.util.List;
import java.util.stream.Collectors;
import org.enso.interpreter.epb.EpbContext;
import org.enso.interpreter.epb.EpbLanguage;
import org.enso.interpreter.epb.EpbParser;
import org.enso.interpreter.epb.runtime.ForeignParsingException;
import org.enso.interpreter.epb.runtime.GuardedTruffleContext;
import com.oracle.truffle.api.CallTarget;
import com.oracle.truffle.api.CompilerDirectives;
import com.oracle.truffle.api.CompilerDirectives.CompilationFinal;
@ -10,14 +20,6 @@ import com.oracle.truffle.api.interop.InteropException;
import com.oracle.truffle.api.interop.InteropLibrary;
import com.oracle.truffle.api.nodes.RootNode;
import com.oracle.truffle.api.source.Source;
import java.util.Arrays;
import java.util.List;
import java.util.stream.Collectors;
import org.enso.interpreter.epb.EpbContext;
import org.enso.interpreter.epb.EpbLanguage;
import org.enso.interpreter.epb.EpbParser;
import org.enso.interpreter.epb.runtime.ForeignParsingException;
import org.enso.interpreter.epb.runtime.GuardedTruffleContext;
public class ForeignEvalNode extends RootNode {
private final EpbParser.Result code;
@ -136,12 +138,13 @@ public class ForeignEvalNode extends RootNode {
private void parsePy() {
try {
String args = Arrays.stream(argNames).collect(Collectors.joining(","));
String head =
"import polyglot\n"
+ "@polyglot.export_value\n"
+ "def polyglot_enso_python_eval("
+ args
+ "):\n";
String head = """
import site
import polyglot
@polyglot.export_value
def polyglot_enso_python_eval("""
+ args
+ "):\n";
String indentLines =
code.getForeignSource().lines().map(l -> " " + l).collect(Collectors.joining("\n"));
Source source =

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@ -3,107 +3,185 @@ from Standard.Base import all
from Standard.Test import Test, Test_Suite
import Standard.Test.Extensions
spec = Test.group "Process" <|
Test.specify "should call simple command" <|
result = case Platform.os of
Platform.OS.Windows ->
Process.run "PowerShell" ["-Command", "exit 0"]
_ ->
Process.run "bash" ["-c", "exit 0"]
result.exit_code.should_equal Exit_Code.Success
Test.specify "should return exit code" <|
case Platform.os of
Platform.OS.Unknown ->
Test.fail "Unsupported platform."
Platform.OS.Windows ->
r = Process.run "PowerShell" ["-Command", "exit 42"]
r.exit_code.should_equal <| Exit_Code.Failure 42
polyglot java import java.lang.System as Java_System
polyglot java import java.io.File as Java_File
s = Process.run "PowerShell" ["-Command", "exit 0"]
s.exit_code.should_equal <| Exit_Code.Success
_ ->
r = Process.run "bash" ["-c", "exit 42"]
r.exit_code.should_equal <| Exit_Code.Failure 42
pending_python_missing = if Polyglot.is_language_installed "python" then Nothing else """
Can't run Python tests, Python is not installed.
s = Process.run "bash" ["-c", "exit 0"]
s.exit_code.should_equal <| Exit_Code.Success
Test.specify "should return stdout" <|
case Platform.os of
Platform.OS.Unknown ->
Test.fail "Unsupported platform."
Platform.OS.Windows ->
builder = Process.new_builder "PowerShell" ["-Command", "[System.Console]::Out.Write('Hello')"]
result = builder.create
result.exit_code.to_number . should_equal 0
result.stdout . should_equal "Hello"
result.stderr . should_equal ""
spec =
Test.group "Process" <|
Test.specify "should call simple command" <|
result = case Platform.os of
Platform.OS.Windows ->
Process.run "PowerShell" ["-Command", "exit 0"]
_ ->
Process.run "bash" ["-c", "exit 0"]
result.exit_code.should_equal Exit_Code.Success
Test.specify "should return exit code" <|
case Platform.os of
Platform.OS.Unknown ->
Test.fail "Unsupported platform."
Platform.OS.Windows ->
r = Process.run "PowerShell" ["-Command", "exit 42"]
r.exit_code.should_equal <| Exit_Code.Failure 42
run_result = Process.run "PowerShell" ["-Command", "[System.Console]::Out.Write('Hello')"]
run_result.exit_code.to_number . should_equal 0
run_result.stdout . should_equal "Hello"
run_result.stderr . should_equal ""
_ ->
builder = Process.new_builder "bash" ["-c", "echo -n Hello"]
result = builder.create
result.exit_code.to_number . should_equal 0
result.stdout . should_equal "Hello"
result.stderr . should_equal ""
s = Process.run "PowerShell" ["-Command", "exit 0"]
s.exit_code.should_equal <| Exit_Code.Success
_ ->
r = Process.run "bash" ["-c", "exit 42"]
r.exit_code.should_equal <| Exit_Code.Failure 42
run_result = Process.run "bash" ["-c", "echo -n Hello"]
run_result.exit_code.to_number . should_equal 0
run_result.stdout . should_equal "Hello"
run_result.stderr . should_equal ""
Test.specify "should return stderr" <|
case Platform.os of
Platform.OS.Unknown ->
Test.fail "Unsupported platform."
Platform.OS.Windows ->
builder = Process.new_builder "PowerShell" ["-Command", "[System.Console]::Error.Write('Error')"]
result = builder.create
result.exit_code.to_number . should_equal 0
result.stdout . should_equal ""
result.stderr . should_equal "Error"
s = Process.run "bash" ["-c", "exit 0"]
s.exit_code.should_equal <| Exit_Code.Success
Test.specify "should return stdout" <|
case Platform.os of
Platform.OS.Unknown ->
Test.fail "Unsupported platform."
Platform.OS.Windows ->
builder = Process.new_builder "PowerShell" ["-Command", "[System.Console]::Out.Write('Hello')"]
result = builder.create
result.exit_code.to_number . should_equal 0
result.stdout . should_equal "Hello"
result.stderr . should_equal ""
run_result = Process.run "PowerShell" ["-Command", "[System.Console]::Error.Write('Error')"]
run_result.exit_code.to_number . should_equal 0
run_result.stdout . should_equal ""
run_result.stderr . should_equal "Error"
_ ->
builder = Process.new_builder "bash" ["-c", "echo -n Error 1>&2"]
result = builder.create
result.exit_code.to_number . should_equal 0
result.stdout . should_equal ""
result.stderr . should_equal "Error"
run_result = Process.run "PowerShell" ["-Command", "[System.Console]::Out.Write('Hello')"]
run_result.exit_code.to_number . should_equal 0
run_result.stdout . should_equal "Hello"
run_result.stderr . should_equal ""
_ ->
builder = Process.new_builder "bash" ["-c", "echo -n Hello"]
result = builder.create
result.exit_code.to_number . should_equal 0
result.stdout . should_equal "Hello"
result.stderr . should_equal ""
run_result = Process.run "bash" ["-c", "echo -n Error 1>&2"]
run_result.exit_code.to_number . should_equal 0
run_result.stdout . should_equal ""
run_result.stderr . should_equal "Error"
Test.specify "should feed stdin" <|
case Platform.os of
Platform.OS.Unknown ->
Test.fail "Unsupported platform."
Platform.OS.Windows ->
builder = Process.new_builder "PowerShell" ["-Command", "[System.Console]::ReadLine()"] . set_stdin "sample"
result = builder.create
result.exit_code.to_number . should_equal 0
result.stdout . should_equal 'sample\r\n'
result.stderr . should_equal ""
run_result = Process.run "bash" ["-c", "echo -n Hello"]
run_result.exit_code.to_number . should_equal 0
run_result.stdout . should_equal "Hello"
run_result.stderr . should_equal ""
Test.specify "should return stderr" <|
case Platform.os of
Platform.OS.Unknown ->
Test.fail "Unsupported platform."
Platform.OS.Windows ->
builder = Process.new_builder "PowerShell" ["-Command", "[System.Console]::Error.Write('Error')"]
result = builder.create
result.exit_code.to_number . should_equal 0
result.stdout . should_equal ""
result.stderr . should_equal "Error"
run_result = Process.run "PowerShell" ["-Command", "[System.Console]::ReadLine()"] stdin="sample"
run_result.exit_code.to_number . should_equal 0
run_result.stdout . should_equal 'sample\r\n'
run_result.stderr . should_equal ""
_ ->
builder = Process.new_builder "bash" ["-c", "read line; echo -n $line"] . set_stdin "sample"
result = builder.create
result.exit_code.to_number . should_equal 0
result.stdout . should_equal "sample"
result.stderr . should_equal ""
run_result = Process.run "PowerShell" ["-Command", "[System.Console]::Error.Write('Error')"]
run_result.exit_code.to_number . should_equal 0
run_result.stdout . should_equal ""
run_result.stderr . should_equal "Error"
_ ->
builder = Process.new_builder "bash" ["-c", "echo -n Error 1>&2"]
result = builder.create
result.exit_code.to_number . should_equal 0
result.stdout . should_equal ""
result.stderr . should_equal "Error"
run_result = Process.run "bash" ["-c", "read line; echo -n $line"] stdin="sample"
run_result.exit_code.to_number . should_equal 0
run_result.stdout . should_equal 'sample'
run_result.stderr . should_equal ""
run_result = Process.run "bash" ["-c", "echo -n Error 1>&2"]
run_result.exit_code.to_number . should_equal 0
run_result.stdout . should_equal ""
run_result.stderr . should_equal "Error"
Test.specify "should feed stdin" <|
case Platform.os of
Platform.OS.Unknown ->
Test.fail "Unsupported platform."
Platform.OS.Windows ->
builder = Process.new_builder "PowerShell" ["-Command", "[System.Console]::ReadLine()"] . set_stdin "sample"
result = builder.create
result.exit_code.to_number . should_equal 0
result.stdout . should_equal 'sample\r\n'
result.stderr . should_equal ""
run_result = Process.run "PowerShell" ["-Command", "[System.Console]::ReadLine()"] stdin="sample"
run_result.exit_code.to_number . should_equal 0
run_result.stdout . should_equal 'sample\r\n'
run_result.stderr . should_equal ""
_ ->
builder = Process.new_builder "bash" ["-c", "read line; echo -n $line"] . set_stdin "sample"
result = builder.create
result.exit_code.to_number . should_equal 0
result.stdout . should_equal "sample"
result.stderr . should_equal ""
run_result = Process.run "bash" ["-c", "read line; echo -n $line"] stdin="sample"
run_result.exit_code.to_number . should_equal 0
run_result.stdout . should_equal 'sample'
run_result.stderr . should_equal ""
Test.group "Enso on Enso" <|
enso_bin =
p = Java_System.getProperty "truffle.class.path.append"
s = p.split Java_File.separator
paths = s.take (Index_Sub_Range.While _!="..")
j = paths . join Java_File.separator
File.new j / if Platform.os == Platform.OS.Windows then "enso.bat" else "enso"
create_new_enso_project =
bin = enso_bin
tmp_file = File.create_temporary_file "enso_prj" ""
dir = tmp_file/".."/(tmp_file.name+".dir") . normalize
res = Process.run bin.path [ "--new", dir.path ]
IO.println res.stdout
IO.println res.stderr
res.exit_code . should_equal Exit_Code.Success
dir
Test.specify "Create Enso Project with numpy" pending=pending_python_missing <|
setup_venv dir =
gvm = File.new <| Java_System.getProperty "java.home"
python = gvm/"bin"/"graalpy"
res = Process.run python.path [ "-m", "venv", dir.path ]
IO.println res.stdout
IO.println res.stderr
res.exit_code . should_equal Exit_Code.Success
install_num_py dir =
python = dir/"bin"/"graalpy"
res = Process.run python.path [ "-m", "pip", "install", "numpy" ]
IO.println res.stdout
IO.println res.stderr
res.exit_code . should_equal Exit_Code.Success
rewrite_main_file dir =
main = dir/"src"/"Main.enso"
main.exists . should_be_true
code = """
foreign python random_array s = """
import numpy
return numpy.random.normal(size=s)
main = random_array 10
code . write main on_existing_file=Existing_File_Behavior.Overwrite
IO.println "==== Generating Enso Project ===="
prj = create_new_enso_project
IO.println "Project ready at "+prj.path
IO.println "==== Changing Main.enso ===="
rewrite_main_file prj
IO.println "==== Preparing Python Virtual Environment ===="
setup_venv prj/"polyglot"/"python"
IO.println "==== Installing numpy ===="
install_num_py prj/"polyglot"/"python"
IO.println "==== Executing project ===="
res = Process.run enso_bin.path [ "--run", prj.path ]
IO.println res.stdout
IO.println res.stderr
res.exit_code . should_equal Exit_Code.Success
IO.println "==== Done ===="
res.stdout.should_contain "array(["
res.stdout.should_contain "])"
main = Test_Suite.run_main spec