Commit Graph

51 Commits

Author SHA1 Message Date
Radosław Waśko
16e1999040
Fix copy_to/move_to edge case when source and target are the same (#9798)
- Adds tests for an edge case where the source and target of copy/move operation are the same.
- And fixes the behaviour to be as expected.
2024-04-29 12:29:07 +00:00
Radosław Waśko
df4a7efcdd
Add AWS SSO JARs to the Standard.AWS library (#9782)
As reported by our users, when using the AWS SSO, our code was failing with:
```
Execution finished with an error: To use Sso related properties in the 'xyz' profile, the 'sso' service module must be on the class path.
```

This PR adds the missing JARs to fix that.

Additionally it improves the license review tool UX a bit (parts of #9122):
- sorting the report by amount of problems, so that dependencies with unresolved problems appear at the top,
- semi-automatic helper button to rename package configurations after a version bump,
- button to remove stale entries from config (files or copyrights that disappeared after update),
- button to add custom copyright notice text straight from the report UI,
- button to set a file as the license for the project (creating the `custom-license` file automatically)
- ability to filter processed projects - e.g. `openLegalReviewReport AWS` will only run on the AWS subproject - saving time processing unchanged dependencies,
- updated the license search heuristic, fixing a problem with duplicates:
- if we had dependencies `netty-http` and `netty-http2`, because of a prefix-check logic, the notices for `netty-http` would also appear again for `netty-http2`, which is not valid. I have improved the heuristic to avoid these false positives and removed them from the current report.
- WIP: button to mark a license type as reviewed (not finished in this PR).
2024-04-25 18:44:51 +00:00
Radosław Waśko
0c989c6938
Writing to Data Links (#9750)
- Closes #9292
- and also closes #9522
2024-04-25 17:55:49 +00:00
James Dunkerley
fb9cf38914
Excel_Workbook.read_many (#9759)
- Some minor linting fixes.
- Adjust `headers` parameter so a dedicated type.
![image](https://github.com/enso-org/enso/assets/4699705/989f464d-df95-410e-a03b-36661f1c4a37)
- Fix bug with `read` on an `Excel_Workbook` so error handled more gracefully and not panicking to UI.
![image](https://github.com/enso-org/enso/assets/4699705/23b4575f-daad-4719-a5cc-30d064bd7f7a)
- Fix bug when writing to a file with an `Excel_Format` with an invalid extension which was causing a panic.
![image](https://github.com/enso-org/enso/assets/4699705/dc0e055c-c1b6-482f-b129-eb69f6554d72)
- Add `read_many` to `Excel_Workbook` allowing reading more than one sheet at a time.
2024-04-24 13:16:44 +00:00
James Dunkerley
16126a0c71
Working through various issues from OKR / blog use. (#9739)
- Fixed `list_directory` so that it works with defaults and uses the `Folder_Browse`.
![image](https://github.com/enso-org/enso/assets/4699705/cf8eb187-a1fe-4eb7-a017-e7bb40e30e12)
- Adjusted types of `order_by` in `Aggregate_Column.First` and `Aggregate_Column.Last` so supports single `Sort_Column`.
- Adjusted types of `order_by` in `Aggregate_Column.First` and `Aggregate_Column.Last` so an empty Vector is valid (treated as Nothing).
- Adjusted `Count_Distinct` so if an empty set of columns then equivalent to `Count`.
- Use the multi-select widget for `columns` in `Count_Distinct`.
![image](https://github.com/enso-org/enso/assets/4699705/86e8f3c1-9cbe-4fb3-b6fd-43b937346082)
- Sort the widget for `order_by` in `First` / `Last`.
![image](https://github.com/enso-org/enso/assets/4699705/d624544c-6f4d-42ef-bb97-79b68aa60569)
- Bug fix for widgets with both tagValues and dynamic data. (Thanks @farmaazon).
- Use the multi-select for various things.
2024-04-18 21:50:20 +00:00
Radosław Waśko
34f3331561
Implement recursive argument for File.delete (#9719)
- Closes #8993
2024-04-17 16:53:45 +00:00
Pavel Marek
4dc7992ab5
Export works without import (#9683) 2024-04-12 14:23:34 +02:00
Radosław Waśko
5650c7aed2
Refactoring Enso_File to be path based (#9581)
- Closes #9289
- Ensures that we can refer through `Enso_File` to files that do not _yet_ exist - preparing us for implementing the Write functionalities for `Enso_File` (#9291).
2024-04-09 11:15:29 +00:00
Radosław Waśko
f2d6079ac4
Fix missing AWS region in S3 operations (#9546)
- Closes #9284
- Now our tests run without the default `AWS_` config, thus ensuring that the tested setups work in a clean environment.
- After all, more complicated logic was needed for buckets access - apparently the AWS SDK only allows for some operations on buckets to happen if the client is connected to the correct region. Thus detection of bucket regions had to be implemented.
- Added `AWS_Region` widget based on autoscoping.
- Fixed `AWS_Credential.profile_names` crashing if no AWS config was found. Now it returns no profiles if not found. Added a regression test.
2024-03-27 12:00:15 +00:00
Radosław Waśko
af5354b869
Data Link for reading Enso_File (#9525)
- Closes #9282
2024-03-27 04:17:07 +00:00
James Dunkerley
7098c5e3e6
Apply ICONs and other tweaks. (#9552)
Lots of ICONs...
2024-03-26 19:44:06 +00:00
Radosław Waśko
6665c22eb9
Make data-links behave more like 'symlinks' (#9485)
- Closes #9324
2024-03-22 17:01:54 +00:00
James Dunkerley
2f0d99a1cb
Snowflake Connectivity (#9435)
* Initial connection to Snowflake via an account, username and password.

* Fix databases and schemas in Snowflake.
Add warehouses.

* Add warehouse.
Update schema dropdowns.

* Add ability to set warehouse and pass at connect.

* Fix for NPE in license review

* scalafmt

* Separate Snowflake from Database.

* Scala fmt.

* Legal Review

* Avoid using ARROW for snowflake.

* Tidy up Entity_Naming_Properties.

* Fix for separating Entity_Namimg_Properties.

* Allow some tweaking of Postgres dialect to allow snowflake to use as well.

* Working on reading Date, Time and Date Times.

* Changelog.

* Java format.

* Make Snowflake Time and TimeStamp stuff work.
Move some responsibilities to Type_Mapping.

* Make Snowflake Time and TimeStamp stuff work.
Move some responsibilities to Type_Mapping.

* fix

* Update distribution/lib/Standard/Database/0.0.0-dev/src/Connection/Connection.enso

Co-authored-by: Radosław Waśko <radoslaw.wasko@enso.org>

* PR comments.

* Last refactor for PR.

* Fix.

---------

Co-authored-by: Radosław Waśko <radoslaw.wasko@enso.org>
Co-authored-by: mergify[bot] <37929162+mergify[bot]@users.noreply.github.com>
2024-03-20 10:06:12 +00:00
Radosław Waśko
6e5b4d93a3
Implement refreshing the Cloud token in Enso libraries (#9390)
- Closes #9300
- Now the Enso libraries are themselves capable of refreshing the access token, thus there is no more problems if the token expires during a long running workflow.
- Adds `get_optional_field` sibling to `get_required_field` for more unified parsing of JSON responses from the Cloud.
- Adds `expected_type` that checks the type of extracted fields. This way, if the response is malformed we get a nice Enso Cloud error telling us what is wrong with the payload instead of a `Type_Error` later down the line.
- Fixes `Test.expect_panic_with` to actually catch only panics. Before it used to also handle dataflow errors - but these have `.should_fail_with` instead. We should distinguish these scenarios.
2024-03-19 19:26:34 +00:00
Radosław Waśko
2e35189d83
Better error message in Data.read when an argument to format is missing (#9337) 2024-03-11 14:50:32 +00:00
James Dunkerley
c7d693dfc8
Move Standard.Database.Data to Standard.Database. (#9321)
Moves the types out of `Data`.
2024-03-07 14:43:38 +00:00
James Dunkerley
1e33723ce9
ICONs and linting... (#9319)
- Apply all the icons from @Cassandra-Clark.
- Fix various linting issues.
- Remove circular dependency between Table and Database.
2024-03-07 12:26:32 +00:00
James Dunkerley
7f6d10a9e0
Some minor improvements suggested from Ned's use (#9249)
- Adjusted `AWS_Credential` to have a `Default` and removed support for `Nothing` from functions.
- Renamed `Response_Body.to_file` to `Response_Body.write`.
- Add `write` to `Response`.
- Add `Table.get_value` and `DB_Table.get_value` allowing getting a single value from a table.
- Added `Data.download` allowing downloading from a URL to a file.
- Added text widget as input widget for `Data` methods.

![image](https://github.com/enso-org/enso/assets/4699705/fcfc8b1e-1197-4106-b8a7-43b1435327c0)
2024-03-04 16:33:31 +00:00
Radosław Waśko
4316709379
Implementing reading Data Links (#9215)
- Close #9123
2024-03-01 15:33:21 +00:00
Radosław Waśko
d817df94a5
Move Enso_Cloud from Data to top-level in Standard.Base (#9140)
- 4 weeks ago we discussed with @jdunkerley we may want to move this module.
- `Data` is a submodule mostly for various data-structures etc., the cloud stuff did not fit that well in there.
2024-02-22 14:42:35 +00:00
Radosław Waśko
d845e709a1
Refactor S3 path handling (#9092)
- Closes #9021
2024-02-22 09:15:34 +00:00
AdRiley
27ec236c19
rename database Table to DB_Table (#9067)
Rename database.Table to database.DB_Table to avoid name collisions as part of https://github.com/enso-org/enso/issues/8981
2024-02-19 17:31:58 +00:00
Radosław Waśko
cf71a05c3b
Refactor common context handling pattern (#9087) 2024-02-19 11:59:42 +00:00
Radosław Waśko
642d5a691e
Implement copy_to and move_to for S3_File (#9054)
- Closes #8833
- Tests for copying between S3 and `Enso_File` will only be added once we implement Enso_File writing.
2024-02-16 10:42:28 +00:00
AdRiley
5c7947ce60
Rename database column to DB_Column (#9046)
Rename database column to DB_Column to avoid name collisions as part of https://github.com/enso-org/enso/issues/8981
2024-02-14 09:11:52 +00:00
AdRiley
c4701a9bd3
Rename Builder to SQL_Builder (#9032)
* Rename Builder to SQL_Builder

* Missed one
2024-02-13 11:04:52 +00:00
Radosław Waśko
eb59b475f6
Write support for S3 (#8921)
- Closes #8809
2024-02-12 19:04:13 +00:00
James Dunkerley
0c39f8ec04
Allow Filter_Condition to be inverted. (#8861)
- Various linting fixes (doc comments and type annotations etc.).
- Add an action to determine if a `Filter_Condition` is keep or remove.

https://github.com/enso-org/enso/assets/4699705/69ba2bd3-8893-4237-acc4-eb01f534a209

- Remove `Not_In`, `Not_Contains` and `Not_Like` from `Filter_Condition`.

- Ability to use an `Expression` as a `Column_Ref`.

https://github.com/enso-org/enso/assets/4699705/16a2e030-f8f9-4f59-beca-2646f56fcb90
2024-02-07 14:36:14 +00:00
Radosław Waśko
edfcfde11c
Tests and improvements for secrets in cloud subdirectories (#8791)
- Closes #8723
- Adds some missing features that were needed to make this work:
- `Enso_File.create_directory` and `Enso_File.delete`, and basic tests for it
- Changes how `Enso_Secret.list` is obtained - using a different Cloud endpoint allows us to implement the desired logic, the default endpoint was giving us _all_ secrets which was not what we wanted here.
- Implements `Enso_Secret.update` and tests for it

# Important Notes
Notes describing any problems with the current Cloud API:
https://docs.google.com/document/d/1x8RUt3KkwyhlxGux7XUGfOdtFSAZV3fI9lSSqQ3XsXk/edit

Apparently, everything that was needed to make this feature work has already been implemented, although a few features needed workarounds on Enso side to work properly.
2024-01-24 10:17:22 +00:00
Radosław Waśko
368e4867b4
Allow secrets in AWS_Credential (#8774)
- Closes #8722
2024-01-19 19:00:56 +00:00
Pavel Marek
428e83de36
Remove org.bouncycastle dependency (#8664)
Remove `org.bouncycastle` dependency from `org.enso.runtime`.
2024-01-04 17:16:41 +01:00
Radosław Waśko
a1207e029d
Unify File_Format_Metadata with File_For_Read (#8628)
- Closes #8555
- Refactors the file format detection logic, compacting lots of repetitive logic for HTTP handling into helper functions.
- Some updates to CODEOWNERS.
2024-01-04 03:57:05 +00:00
Radosław Waśko
b5c995a7bf
Reworking Excel support to allow for reading of big files (#8403)
- Closes #8111 by making sure that all Excel workbooks are read using a backing file (which should be more memory efficient).
- If the workbook is being opened from an input stream, that stream is materialized to a `Temporary_File`.
- Adds tests fetching Table formats from HTTP.
- Extends `simple-httpbin` with ability to serve files for our tests.
- Ensures that the `Infer` option on `Excel` format also works with streams, if content-type metadata is available (e.g. from HTTP headers).
- Implements a `Temporary_File` facility that can be used to create a temporary file that is deleted once all references to the `Temporary_File` instance are GCed.
2023-12-15 00:02:15 +00:00
James Dunkerley
f60836d9e1
Apply ICONs (#8360)
- Amend a couple of missed groups.
- Add the first pass of some ICONs.

The linter tool has been updated to support rewriting the ICON as well.
2023-11-22 15:24:16 +00:00
James Dunkerley
347b5a7cf5
Linting and Groups update (#8357)
- Fix issues from the linter.
- Rename the constructors for `Blank_Selector`.
- Update various GROUP tags.
2023-11-21 18:12:27 +00:00
James Dunkerley
ecaca12df1
Integrating Enso Cloud with the libraries (part 1...) (#8006)
- Add a `File_For_Read` type. Used for `File_Format` to read files.
- Added `Enso_User` representing the current user in `Enso_Cloud`.
- *Will be later able to list known users.*
- Added `Enso_Secret` representing a value defined in `Enso_Cloud`.
- Value not used within Enso only accessed within polyglot Java.
- Integrated into `Username_And_Password` and can be used within JDBC connections.
- Integrated into HTTP Headers so a secret can be used as a value.
- New `URI_With_Query` with the same API as `URI`. Supporting secrets in the value.
- *Will be integrated with AWS credentials.*
- Added `Enso_File` representing a file or a folder in the cloud.
- Support the same API as `File` (like the `S3_File`).
- *Will support `enso://` URI style access.*
2023-11-20 23:21:14 +00:00
Radosław Waśko
79011bd550
Implement Table.lookup_and_replace in Database (#8146)
- Closes #7981
- Adds a `RUNTIME_ERROR` operation into the DB dialect, that may be used to 'crash' a query if a condition is met - used to validate if `lookup_and_replace` invariants are still satisfied when the query is materialized.
- Removes old `Table_Helpers.is_table` and `same_backend` checks, in favour of the new way of checking this that relies on `Table.from` conversions, and is much simpler to use and also more robust.
2023-10-31 15:19:55 +00:00
Radosław Waśko
6f78570115
Fix a DROP table bug, add SQL debug logging (#8007)
- Fixes a bug where creating a temporary table could accidentally issue a `DROP` statement of the table name that the user provided, risking destruction of user data.
- Fortunately, the bad scenario was almost impossible, because the `DROP` statement was only issued _if_ we previously checked that the mentioned table _does not exist_ - dropping a nonexistent table does not do any harm.
- It could have been dangerous in a very unlikely scenario that a table was created just between the _existence check_ and the _drop_.
- After the fix the existence check and any modifications are done within a transaction to avoid interference from concurrent modifications, and the DROP is correctly applied to a temporary Enso table instead of the original one.
- Replaced a temporary log with proper simple logging of SQL statements into a file, if an Environment variable is set.
- Used that feature to test that no unexpected statements occur.
2023-10-10 13:16:06 +00:00
James Dunkerley
fb50eb7595
Using conversions in a few places (#7859)
- Shuffle a few `from`s into correct places:
- `Day_Of_Week.from` removing `Day_Of_Week_From` module.
- Adding short cut for `http` and `https` in `Data.read` so it calls onto `Data.fetch` giving a single entry point.
- Moved `URI` extensions from `Standard.Base.Data` module into `Standard.Base.Network.Extensions`.
- Added `post` extension for `URI`.
- Added `contains_key` to `JS_Object`.
- Restored `into` in `JS_Object`:
- Follows old logic populating a constructor.
- Will use conversion from `JS_Object` if present.
- Added automatic deserialization of `Date`, `Time_Of_Day` and `Date_Time` from JSON.
- Uses conversion from `JS_Object`.
- Added conversion from `Text` to a `HTTP_Method` and type checking where `HTTP_Method` used in public APIs.
- Added support for `Date`, `Time_Of_Day` and `Date_Time` in `Table.from_objects`.
- Added `expand_column` to `Table` to expand `JS_Object` to values.
- Add type checking for `Table` in `right` arguments (allowing `Column`s to be used).
- Use type checking in `Table.set` to allow for conversion to a `Column`.
- Remove some unused imports.
- Fix for bug in S3 edge case.
2023-10-02 14:54:22 +00:00
James Dunkerley
74d1d0861c
S3 Read Access, Input Stream based reading (#7776)
- Added a `FileSystemSPI` allowing protocol resolution to a target type.
- Separated `Input_Stream` and `Output_Stream` from `File` to allow use in other spaces.
- `File_Format` types `read_web` changed to be `read_stream` working with `InputStream`.
- Added directory listing to `Auto_Detect` allowing for `Data.read` to list a folder.
- Adjusted HTTP to return an `InputStream` not a `byte[]`:
- `Response_Body` adjusted to wrap an `InputStream`.
- Added ability to materialize to either and in-memory vector (<4KB) or a temporary file.
- `Data.fetch` will materialize if not a recognized mime-type.
- Added `HTTP_Error` to handle IO exceptions from the stream.
- `Excel_Format` now supports mime-type and reading a stream.
- `Excel_Workbook` can now get a `Excel_Section` using `read_section`.
- Added S3 APIs:
- `parse_uri`: splits an S3 URI into bucket and key.
- `list_objects`: list the items in a S3 bucket with specified prefix.
- `read_bucket`: list prefixes and keys with a delimiter in a S3 bucket with specified prefix.
- `head`: either head_bucket (tests existance) or head_object API (reads object meta data).
- `get_object`: gets an object from S3 returning as a `Response_Body`.
- Added `S3_File` type acting like a `File`:
- No support for writing in this PR.
- **ToDo:** recursive listing, glob filtering, exists, size.
- Fixed a few invalid type signature line.
- Moved `create` methods for `Postgres_Connection` and `SQLite_Connection` into type instead of module.
- Renamed `Column_Fetcher.Builder` to `Column_Fetcher_Builder`.
- Fixed bug with `select_into` in Dry Run mode creating permanent tables.

**ToDo:** Unit tests.
2023-09-20 15:09:11 +00:00
Radosław Waśko
8b6e70b155
Support for BigInteger values in Table (#7715)
- Fixes #7354
- And also closes #7712
- Refactors how we handle numeric ops - ensuring that the 'kernels' are placed all in one place and selected based on storage types.
2023-09-12 13:18:04 +00:00
James Dunkerley
7d83b3d7b4
Add GROUP to functions (#7622)
- Update list of groups to agreed list.
- Lower case `ALIAS` names to be consistent with function names.
- Add `GROUP` to methods.
- All constructors and functions have doc comments.
- Correct a few typos (e.g. `PRVIATE`).
- Mark some more things as `PRIVATE`.
- Use `ToDo:` and `Note:` consistently.
- Order tags in doc comment.

# Important Notes
We don't have all the doc comments on types and will want to add them in future,
2023-08-23 13:20:38 +00:00
Radosław Waśko
c61c741476
Respect database backend naming limitations when generating table/column names and validate user-provided names to avoid silent name clashes; process JDBC warnings reported from backends (#7428)
- Closes #5951
- Ensures any SQL warnings reported by the database through the JDBC driver are processed and forwarded to the user.
- These warnings show issues like the implicit name truncation that this PR is also solving. It's good to make sure they are visible as they can help avoid and understand unexpected problems. They should not show up in most standard workflows.
- Adds simple history to our REPL.
2023-08-03 09:44:27 +00:00
James Dunkerley
7749286c69
Tidy up the imports using script (#7220)
Ordering the imports to test a script.
2023-07-06 14:22:50 +00:00
Radosław Waśko
4ccf3566ce
Implement add_row_number for Database backends, fix primary key inference for SQLite (#7174)
Closes #6921 and also closes #7037
2023-07-03 11:51:42 +00:00
GregoryTravis
550d146493
Add round, ceil, floor, truncate to the In-Database Column type (#6988) 2023-06-30 16:47:40 +00:00
Radosław Waśko
2bac9cc844
Execution Context integration for Database write operations (#7072)
Closes #6887
2023-06-27 15:51:21 +00:00
James Dunkerley
937651f696
Code Clean Up, Fix Weird Namespace, S3 List Objects and Read Object (#7114)
Mostly a tidy up as part of looking over the function catalogue for groups.
Sorted some whitespaces issues.
2023-06-24 23:18:58 +00:00
James Dunkerley
760fb71798
First part of AWS S3 API, various small fixes. (#6973)
- Add type detection for `Mixed` columns when calling column functions.
- Excel uses column name for missing headers.
- Add aliases for parse functions on text.
- Adjust `Date`, `Time_Of_Day` and `Date_Time` parse functions to not take `Nothing` anymore and provide dropdowns.
- Removed built-in parses.
- All support Locale.
- Add support for missing day or year for parsing a Date.
- All will trim values automatically.
- Added ability to list AWS profiles.
- Added ability to list S3 buckets.
- Workaround for Table.aggregate so default item added works.
2023-06-15 16:20:13 +00:00
Dmitry Bushev
48f0c6f5e8
Scala 2.13.11 and libraries update (#7010)
Update Scala and libraries.
2023-06-14 13:15:57 +00:00