Commit Graph

87 Commits

Author SHA1 Message Date
Radosław Waśko
7c94fa6a77
Custom Encoding support when writing Delimited files (#3564)
Implements https://www.pivotaltracker.com/story/show/182545847
2022-07-07 00:20:00 +00:00
James Dunkerley
4ca2097488
Adding write support to File_Format.Excel (#3551)
Support for writing tables to Excel.

# Important Notes
Has custom support for Error mode as will allow appending a new table in this mode to the file.
2022-07-04 18:32:16 +00:00
Radosław Waśko
972b34d1a9
Implement value formatting and writing new files in Delimited format. (#3528)
Implements https://www.pivotaltracker.com/story/show/182309429 and https://www.pivotaltracker.com/story/show/182309573
2022-06-23 16:51:52 +00:00
James Dunkerley
7a2d304fa0
Update Excel reading API (#3523)
- Remove `from_xls` and `from_xlsx`.
- Add `headers` support to `File_Format.Excel`.
- Altered default read for Excel to be the first sheet.
- Altered behavior so that single cells grow down and right when reading sheet.
- Altered `Excel_Range` so knows if single cell or 1x1 range address.

# Important Notes
- Renamed `Range` to `Cell_Range` to avoid name clash.
2022-06-21 13:39:32 +00:00
Hubert Plociniczak
22a371a9c6
Substitute this with self (#3524)
A semi-manual s/this/self appied to the whole standard library.
Related to https://www.pivotaltracker.com/story/show/182328601

In the compiler promoted to use constants instead of hardcoded
`this`/`self` whenever possible.

# Important Notes
The PR **does not** require explicit `self` parameter declaration for methods as this part
of the design is still under consideration.
2022-06-21 10:53:52 +00:00
James Dunkerley
a0c6fa9c96
Removing old functions and tidy up of Table types (#3519)
- Removed `select` method.
- Removed `group` method.
- Removed `Aggregate_Table` type.
- Removed `Order_Rule` type.
- Removed `sort` method from Table.
- Expanded comments on `order_by`.
- Update comment on `aggregate` on Database.
- Update Visualisation to use new APIs.
- Updated Data Science examples to use new APIs.
- Moved Examples test out of Tests to own test.

# Important Notes
Need to get Examples_Tests added to CI.
2022-06-14 13:37:20 +00:00
Radosław Waśko
e83c36d9d6
Add scaffolding for Table.write function (#3521)
Implements https://www.pivotaltracker.com/story/show/182309559

This task implements common scaffolding for the `Table.write`, so that the particular implementations for Delimited and Excel file formats can be done in parallel.
2022-06-14 11:29:03 +00:00
Hubert Plociniczak
fd46e84e8d
Towards a full-blown builtins DSL (part 3) (#3471)
Auto-generate all builtin methods for builtin `File` type from method signatures.
Similarly, for `ManagedResource` and `Warning`.
Additionally, support for specializations for overloaded and non-overloaded methods is added.
Coverage can be tracked by the number of hard-coded builtin classes that are now deleted.

## Important notes

Notice how `type File` now lacks `prim_file` field and we were able to get rid off all of those
propagating method calls without writing a single builtin node class.
Similarly `ManagedResource` and `Warning` are now builtins and `Prim_Warnings` stub is now gone.
2022-06-13 11:48:34 +00:00
Radosław Waśko
a04825a5ce
Add Text.write Function (#3518)
Implements https://www.pivotaltracker.com/story/show/182309026
2022-06-13 09:11:46 +00:00
James Dunkerley
e97d27e1e0
Adjusting First and Last order_by to use Sort_Column_Selector (#3517) 2022-06-10 09:59:03 +00:00
James Dunkerley
8afba43add
Implement In-Memory Table order_by (#3515)
Implemented the `order_by` function with support for all modes of operation.
Added support for case insensitive natural order.

# Important Notes
- Improved MultiValueIndex/Key to not create loads of arrays.
- Adjusted HashCode for MultiValueKey to have a simple algorithm.
- Added Text_Utils.compare_normalized_ignoring_case to allow for case insensitive comparisons.
- Fixed issues with ObjectComparator and added some unit tests for it.
2022-06-08 12:30:50 +00:00
Radosław Waśko
2af970fe52
Basic changes to File_Format (#3516)
Implements https://www.pivotaltracker.com/story/show/182308987
2022-06-08 09:53:18 +00:00
Radosław Waśko
a382e0c15e
Improve database Table.order_by (#3514)
Implements https://www.pivotaltracker.com/story/show/182195405

Adds support for the Postgres dialect and simple case insensitive collation for SQLite.
2022-06-07 12:31:55 +00:00
Radosław Waśko
7d94efa6f2
Implement Table.order_by for SQLite and the common scaffolding for all backends (#3502)
Implements the common and SQLite parts of https://www.pivotaltracker.com/story/show/182195405
2022-06-06 10:56:52 +00:00
James Dunkerley
ba5d6823a9
Merge the Unique Name Strategy with NameDeduplicator (#3490)
- Merge the two approaches and makes them consistent
- Add warning support into Reader

# Important Notes
- Added support for JUnit format XML generation on tests. Use `ENSO_TEST_JUNIT_DIR`
2022-06-01 12:52:23 +00:00
James Dunkerley
1aa0bb3552
Rank Data, Correlation, Covariance, R Squared (#3484)
- Added new `Statistic`s: Covariance, Pearson, Spearman, R Squared
- Added `covariance_matrix` function
- Added `pearson_correlation` function to compute correlation matrix
- Added `rank_data` and Rank_Method type to create rankings of a Vector
- Added `spearman_correlation` function to compute Spearman Rank correlation matrix

# Important Notes
- Added `Panic.throw_wrapped_if_error` and `Panic.handle_wrapped_dataflow_error` to help with errors within a loop.
- Removed `Array.set_at` use from `Table.Vector_Builder`
2022-05-30 17:13:06 +00:00
Radosław Waśko
f0f3a343eb
Adjust Table.sort_columns to use Text_Ordering design (#3487)
Implements https://www.pivotaltracker.com/story/show/182195306
2022-05-30 12:26:29 +00:00
Radosław Waśko
db611e1581
Remove obsolete Csv reading module (#3482)
Completes https://www.pivotaltracker.com/story/show/182037405

# Important Notes
- Some tests had to be adapted to the new parsing logic.
2022-05-28 10:01:14 +00:00
Radosław Waśko
8828d801ea
Implement Table from Text conversion (#3478)
Implements https://www.pivotaltracker.com/story/show/181824168
2022-05-26 12:04:25 +00:00
Radosław Waśko
7f572bf3e4
The user should be able to have the headers Inferred when reading a Delimited file (#3472)
Implements https://www.pivotaltracker.com/story/show/181986831
2022-05-25 13:29:17 +00:00
Radosław Waśko
ec1b072824
Integrate value parsing with Delimited file reading (#3463)
Implements https://www.pivotaltracker.com/story/show/182200028
2022-05-24 17:59:00 +02:00
Radosław Waśko
ff7700ebb1
Automatic inference of value types when parsing table columns (#3462)
Implements https://www.pivotaltracker.com/story/show/182199966
2022-05-20 15:08:36 +00:00
Radosław Waśko
8430ce2625
Parsing values with known types (#3455)
Implements https://www.pivotaltracker.com/story/show/181824146
2022-05-18 15:27:48 +00:00
Hubert Plociniczak
6b6b1430bc
Cleanup Ref - get/put (#3457)
The change promotes static methods of `Ref`, `get` and `put`, to be
methods of `Ref` type.
The change also removes `Ref` module from the default namespace.
Had to mostly c&p functional dispatch for now, in order for the methods
to be found. Will auto-generate that code as part of builtins system.

Related to https://www.pivotaltracker.com/story/show/182138899
2022-05-17 10:26:36 +00:00
James Dunkerley
4f3a76817c
Statistics on a Vector (#3442)
- Implements various statistics on Vector

# Important Notes
Some minor codebase improvements:
- Some tweaks to Any/Nothing to improve performance
- Fixed bug in ObjectComparator
- Added if_nothing
- Removed Group_By_Key
2022-05-11 13:25:06 +00:00
Radosław Waśko
64f178f7a8
Delimited File Encoding (#3430)
Implements https://www.pivotaltracker.com/story/show/181998375
2022-05-10 22:44:05 +00:00
James Dunkerley
078c665a60
File_Format.Excel work (#3425)
- Read in Excel files following the specification.
- Support for XLSX and XLS formats.
- Ability to select ranges and sheets.
- Skip Rows and Row Limits.

# Important Notes
- Minor fix to DelimitedReader for Windows
2022-05-06 13:21:10 +00:00
Hubert Plociniczak
4bbabc00be
Move Builtin Types and Methods to stdlib (#3363)
This PR replaces hard-coded `@Builtin_Method` and `@Builtin_Type` nodes in Builtins with an automated solution
that a) collects metadata from such annotations b) generates `BuiltinTypes` c) registers builtin methods with corresponding
constructors.
The main differences are:
1) The owner of the builtin method does not necessarily have to be a builtin type
2) You can now mix regular methods and builtin ones in stdlib 
3) No need to keep track of builtin methods and types in various places and register them by hand (a source of many typos or omissions as it found during the process of this PR)

Related to #181497846
Benchmarks also execute within the margin of error.

### Important Notes

The PR got a bit large over time as I was moving various builtin types and finding various corner cases.
Most of the changes however are rather simple c&p from Builtins.enso to the corresponding stdlib module.
Here is the list of the most crucial updates:
- `engine/runtime/src/main/java/org/enso/interpreter/runtime/builtin/Builtins.java` - the core of the changes. We no longer register individual builtin constructors and their methods by hand. Instead, the information about those is read from 2 metadata files generated by annotation processors. When the builtin method is encountered in stdlib, we do not ignore the method. Instead we lookup it up in the list of registered functions (see `getBuiltinFunction` and `IrToTruffle`)
- `engine/runtime/src/main/java/org/enso/interpreter/runtime/callable/atom/AtomConstructor.java` has now information whether it corresponds to the builtin type or not.
- `engine/runtime/src/main/scala/org/enso/compiler/codegen/RuntimeStubsGenerator.scala` - when runtime stubs generator encounters a builtin type, based on the @Builtin_Type annotation, it looks up an existing constructor for it and registers it in the provided scope, rather than creating a new one. The scope of the constructor is also changed to the one coming from stdlib, while ensuring that synthetic methods (for fields) also get assigned correctly
- `engine/runtime/src/main/scala/org/enso/compiler/codegen/IrToTruffle.scala` - when a builtin method is encountered in stdlib we don't generate a new function node for it, instead we look it up in the list of registered builtin methods. Note that Integer and Number present a bit of a challenge because they list a whole bunch of methods that don't have a corresponding method (instead delegating to small/big integer implementations).
During the translation new atom constructors get initialized but we don't want to do it for builtins which have gone through the process earlier, hence the exception
- `lib/scala/interpreter-dsl/src/main/java/org/enso/interpreter/dsl/MethodProcessor.java` - @Builtin_Method processor not only  generates the actual code fpr nodes but also collects and writes the info about them (name, class, params) to a metadata file that is read during builtins initialization 
- `lib/scala/interpreter-dsl/src/main/java/org/enso/interpreter/dsl/MethodProcessor.java` - @Builtin_Method processor no longer generates only (root) nodes but also collects and writes the info about them (name, class, params) to a metadata file that is read during builtins initialization
- `lib/scala/interpreter-dsl/src/main/java/org/enso/interpreter/dsl/TypeProcessor.java` - Similar to MethodProcessor but handles @Builtin_Type annotations. It doesn't, **yet**, generate any builtin objects.  It also collects the names, as present in stdlib, if any, so that we can generate the names automatically (see generated `types/ConstantsGen.java`)
- `engine/runtime/src/main/java/org/enso/interpreter/node/expression/builtin` - various classes annotated with @BuiltinType to ensure that the atom constructor is always properly registered for the builitn. Note that in order to support types fields in those, annotation takes optional `params` parameter (comma separated). 
- `engine/runtime/src/bench/scala/org/enso/interpreter/bench/fixtures/semantic/AtomFixtures.scala` - drop manual creation of test list which seemed to be a relict of the old design
2022-05-05 20:18:06 +02:00
Radosław Waśko
8219dca400
Improve support for reading Delimited files (#3424)
Implements https://www.pivotaltracker.com/story/show/181823957
2022-04-29 17:12:19 +00:00
Dmitry Bushev
01d308de74
Load component group modules (#3412) 2022-04-25 18:09:09 +03:00
James Dunkerley
5a6b6749cc
Restructuring for File.read (#3390)
- Added Encoding type
- Added `Text.bytes`, `Text.from_bytes` with Encoding support
- Renamed `File.read` to `File.read_text`
- Renamed `File.write` to `File.write_text`
- Added Encoding support to `File.read_text` and `File.write_text`
- Added warnings to invalid encodings
2022-04-19 16:50:03 +00:00
Dmitry Bushev
998d078b9a
Fill component groups of standard libraries (#3391)
Changelog:
- add: component groups to package descriptions
- add: `executionContext/getComponentGroups` method that returns component groups of libraries that are currently loaded
- doc: cleanup unimplemented undo/redo commands
- refactor: internal component groups datatype
2022-04-14 13:12:18 +00:00
Radosław Waśko
891f064a6a
Extend Aggregate_Spec test suite with tests for missed edge-cases to ensure the feature is well-tested on all backends (#3383)
Implements https://www.pivotaltracker.com/story/show/181805693 and finishes the basic set of features of the Aggregate component.

Still not all aggregations are supported everywhere, because for example SQLite has quite limited support for aggregations. Currently the workaround is to bring the table into memory (if possible) and perform the computation locally. Later on, we may add more complex generator features to emulate the missing aggregations with complex sub-queries.
2022-04-12 11:02:01 +00:00
James Dunkerley
bade0c31de
First and Last ordering (#3380)
Add the missing `order_by` support to First and Last aggregations for InMemory table.
2022-04-06 12:36:46 +00:00
Radosław Waśko
a71db71645
Adding most of remaining aggregates to Database Table (#3375) 2022-04-06 10:06:50 +00:00
James Dunkerley
a4dbc9a37b
Moving Aggregation to Java (#3364) 2022-04-04 09:12:48 +00:00
Radosław Waśko
43265f10a8
Implement Error-Handling for Database aggregations, unify some error helpers across backends (#3371) 2022-03-31 12:10:22 +00:00
Dmitry Bushev
23e5216922
Fix docparser (#3370)
Changelog:
- fix the docparser case when there is an unclosed formatted section before a list
- add the test checking the doc generation on the stdlib
2022-03-31 04:44:34 +00:00
Radosław Waśko
20be5516a5
Aggregates in the Database library - MVP (#3353)
Implements infrastructure for new aggregations in the Database. It comes with only some basic aggregations and limited error-handling. More aggregations and problem handling will be added in subsequent PRs.

# Important Notes
This introduces basic aggregations using our existing codegen and sets-up our testing infrastructure to be able to use the same aggregate tests as in-memory backend for the database backends.

Many aggregations are not yet implemented - they will be added in subsequent tasks.

There are some TODOs left - they will be addressed in the next tasks.
2022-03-28 15:51:37 +00:00
James Dunkerley
02bcfbb2a8
Refactor Aggregate Column (#3349)
- Make it easier to understand the computations.
- Fix issue with First.
- Improve quote handling in Concatenate
- Added validation and warnings to input
2022-03-22 18:18:46 +00:00
Radosław Waśko
cc7333812d
The library developer should be able to handle specific types of Panics while passing through others (#3344)
Implements https://www.pivotaltracker.com/story/show/181569176

Also ensures that Dataflow Errors have proper stack traces (earlier they did not point at the right location).
2022-03-18 16:57:06 +00:00
James Dunkerley
6c1c4554f5
Refactor table.group_by to table.aggregate (#3339)
Following UX work move to `table.aggregate` function.
2022-03-15 15:23:36 +01:00
Radosław Waśko
dedd1eac96
Refactor library warnings to use the new system (#3337)
Implements https://www.pivotaltracker.com/story/show/181536964
2022-03-15 12:52:57 +01:00
James Dunkerley
65465fb8ef
Restructuring the Faker type and creating tests for Group_By (#3318)
- Added Minimum, Maximum, Longest. Shortest, Mode, Percentile
- Added first and last to Map
- Restructured Faker type more inline with FakerJS
- Created 2,500 row data set
- Tests for group_by
- Performance tests for group_by
2022-03-09 10:31:02 +00:00
James Dunkerley
738a691662
Table.group_by (#3305)
Functioning group_by based of Enso Map.

# Important Notes
This is an initial version which will be used to establish the API.
The grouping map will need to be moved to Java code for performance.
2022-03-01 16:18:11 +00:00
Radosław Waśko
0d96f59f44
Data analysts should be able to use Text.to_case to change the case of Text values (#3302)
* Move to_upper_case and to_lower_case into to_case

* Add an export, not sure about it

* Implement title case

TODO: some more tests would be good

* Add more tests

* explain title case

* fix todo

* changelog
2022-02-28 23:20:41 +00:00
Radosław Waśko
b03416f907
Update Column_Selector and Column_Mapping to use Matcher over Matching_Strategy (#3299)
Implements https://www.pivotaltracker.com/story/show/181339748
2022-02-25 18:39:10 +00:00
James Dunkerley
2e2c5562a8
Text.take and Text.drop (#3287)
Implementation of the Text take and drop APIs
- Added `Range.contains` function
- Added `Text_Sub_Range` type
- Added `Text_Utils.index_of` and `Text_Utils.last_index_of` based on ICU StringSearcher
2022-02-22 18:50:59 +00:00
Radosław Waśko
ae9d51555f
Data analysts should be able to use Text.contains to check for substring using various matcher techniques. (#3285)
* Add matching mode definitions

* Add stub for new method API and an initial test suite

* Fix tests, implement exact matching

* Implement Regex matching

* changelog

* Add benchmarks

* Wokraround for case insensitive regex locale support

* minor tweaks

* Unify Case_Insensitive

* Update edge cases

* Fix other affected places

* minor style change

* Add a problematic test

* Add a regex test for a similar situation

* Migrate to StringSearch:wq

* Add test cases for scharfes S edge case

* Add problematic Regex Unicode normalization test

* Document the regex accents peculiarity

* Do not apply the normalization in ASCII only mode

* cr
2022-02-22 15:41:56 +00:00
James Dunkerley
1814d3c4f1
Data analysts should be able to transform a Table using the rename_columns functions (#3249)
* Implement Natural_Order and sort_columns

* Starting on Rename

Align Column_Mapping

Add By_Position
Separating off the validation for By_Index so can reuse for rename

By_Position implemented

By_Index implemented
Adjusted behaviour following discussion with Ned, so that renames dominate untouched columns.

Moving to validation style checks for problems

Putting accumulator back

Rename work

* Add Range.find

* More work

* Regex support
Tidy of Unique Name Strategy

* Fix Regex support

* Warning messages
Tests for Unique Naming Strategy
Table rename working

* Database Table rename_columns
Fix for Table
**Must follow up on slice**

* Some tests

* More tests

* Complete test set
(and associated fixes)

* Functional use_first_row_as_names
Tests to go...

* Test for use_first_row_as_names

* Change log

* trailing space

Co-authored-by: Radosław Waśko <radoslaw.wasko@enso.org>
2022-02-11 10:18:51 +00:00