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Introduced biolib package

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svn path=/nixpkgs/trunk/; revision=12535
This commit is contained in:
Pjotr Prins 2008-08-07 15:01:21 +00:00
parent 9d0b7c4aa9
commit 07595b0397
3 changed files with 29 additions and 0 deletions
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3
pkgs/development/interpreters/r-lang/default.nix
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@ -8,6 +8,7 @@ stdenv.mkDerivation {
};
buildInputs = [readline perl gfortran libpng libX11 libXt zlib];
configureFlags = ["--enable-R-shlib"] ;
meta = {
description = "R is a language and environment for statistical computing and graphics";
@ -16,3 +17,5 @@ stdenv.mkDerivation {
homepage = http://www.r-project.org/;
};
}

21
pkgs/development/libraries/science/biology/biolib/default.nix Normal file
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@ -0,0 +1,21 @@
args: with args;
stdenv.mkDerivation rec {
name = "biolib";
version = "0.0.1";
src = fetchurl {
url = "http://bio3.xparrot.eu/download/nix-biology/biolib-${version}.tar.gz";
sha256 = "1la639rs0v4f3ayvarqv0yxwlnwn188bb1v71d2ybw1xr6gdy688";
};
buildInputs = [cmake rLang zlib];
meta = {
description = "BioLib";
longDescription = ''BioLib brings together a set of opensource libraries
written in C/C++ and makes them available for major Bio* languages: BioPerl,
BioRuby, BioPython'';
license = "GPL2";
homepage = http://biolib.open-bio.org/;
};
}

5
pkgs/top-level/all-packages.nix
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@ -7200,6 +7200,11 @@ let pkgs = rec {
inherit libxml2 guile perl intltool libtool pkgconfig;
} null;
biolib = import ../development/libraries/science/biology/biolib {
inherit fetchurl stdenv readline perl cmake rLang zlib;
};
emboss = import ../applications/science/biology/emboss {
inherit fetchurl stdenv readline perl libpng zlib;
inherit (xorg) libX11 libXt;