From 5262ada436fb89d6d259f242ad6440a83dbef8f1 Mon Sep 17 00:00:00 2001
From: Christoph Neidahl <christoph.neidahl@gmail.com>
Date: Fri, 15 May 2020 09:06:54 +0200
Subject: [PATCH 01/91] palemoon: 28.9.1 -> 28.9.3

---
 pkgs/applications/networking/browsers/palemoon/default.nix | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/pkgs/applications/networking/browsers/palemoon/default.nix b/pkgs/applications/networking/browsers/palemoon/default.nix
index b22a35bc54fb..4593e30f2fa5 100644
--- a/pkgs/applications/networking/browsers/palemoon/default.nix
+++ b/pkgs/applications/networking/browsers/palemoon/default.nix
@@ -16,12 +16,12 @@ let
 
 in stdenv.mkDerivation rec {
   pname = "palemoon";
-  version = "28.9.1";
+  version = "28.9.3";
 
   src = fetchgit {
     url = "https://github.com/MoonchildProductions/Pale-Moon.git";
     rev = "${version}_Release";
-    sha256 = "1772by9r9l1l0wmj4hs89r3zyckcbrq1krb09bn3pxvjjywzvkfl";
+    sha256 = "1f8vfjyihlr2l79mkfgdcvwjnh261n6imkps310x9x3977jiq2wr";
     fetchSubmodules = true;
   };
 

From 5a94a29eec5194e1c8a968a4f1be1ee2e5761335 Mon Sep 17 00:00:00 2001
From: Doron Behar <doron.behar@gmail.com>
Date: Sat, 16 May 2020 17:05:38 +0300
Subject: [PATCH 02/91] mpd: use pkg-config instead of pkgconfig

---
 pkgs/servers/mpd/default.nix | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/pkgs/servers/mpd/default.nix b/pkgs/servers/mpd/default.nix
index 8d862373b995..fdb73c7a5be1 100644
--- a/pkgs/servers/mpd/default.nix
+++ b/pkgs/servers/mpd/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, fetchFromGitHub, meson, ninja, pkgconfig, glib, systemd, boost, darwin
+{ stdenv, fetchFromGitHub, meson, ninja, pkg-config, glib, systemd, boost, darwin
 # Inputs
 , curl, libmms, libnfs, samba
 # Archive support
@@ -116,7 +116,7 @@ let
         ++ (lib.concatLists (lib.attrVals features_ featureDependencies))
         ++ lib.optionals stdenv.isDarwin [ darwin.apple_sdk.frameworks.AudioToolbox darwin.apple_sdk.frameworks.AudioUnit ];
 
-      nativeBuildInputs = [ meson ninja pkgconfig ];
+      nativeBuildInputs = [ meson ninja pkg-config ];
 
       enableParallelBuilding = true;
 

From ecdbbdf181e95ee2f84b62d641f0a984418048ee Mon Sep 17 00:00:00 2001
From: Doron Behar <doron.behar@gmail.com>
Date: Sat, 16 May 2020 17:06:55 +0300
Subject: [PATCH 03/91] mpd: format inputs

---
 pkgs/servers/mpd/default.nix | 11 +++++++++--
 1 file changed, 9 insertions(+), 2 deletions(-)

diff --git a/pkgs/servers/mpd/default.nix b/pkgs/servers/mpd/default.nix
index fdb73c7a5be1..294e36f32741 100644
--- a/pkgs/servers/mpd/default.nix
+++ b/pkgs/servers/mpd/default.nix
@@ -112,11 +112,18 @@ let
         sha256 = "0jnhjhm1ilpcwb4f58b8pgyzjq3dlr0j2xyk0zck0afwkdxyj9cb";
       };
 
-      buildInputs = [ glib boost ]
+      buildInputs = [
+        glib
+        boost
+      ]
         ++ (lib.concatLists (lib.attrVals features_ featureDependencies))
         ++ lib.optionals stdenv.isDarwin [ darwin.apple_sdk.frameworks.AudioToolbox darwin.apple_sdk.frameworks.AudioUnit ];
 
-      nativeBuildInputs = [ meson ninja pkg-config ];
+      nativeBuildInputs = [
+        meson
+        ninja
+        pkg-config
+      ];
 
       enableParallelBuilding = true;
 

From 69aa4f379224876ca5cf38dc5c821fcee60101b4 Mon Sep 17 00:00:00 2001
From: Doron Behar <doron.behar@gmail.com>
Date: Sat, 16 May 2020 17:08:05 +0300
Subject: [PATCH 04/91] mpd: enable tests

---
 pkgs/servers/mpd/default.nix | 37 ++++++++++++++++++++++++++++++++++--
 1 file changed, 35 insertions(+), 2 deletions(-)

diff --git a/pkgs/servers/mpd/default.nix b/pkgs/servers/mpd/default.nix
index 294e36f32741..bd28a7db3835 100644
--- a/pkgs/servers/mpd/default.nix
+++ b/pkgs/servers/mpd/default.nix
@@ -19,6 +19,10 @@
 # Tag support
 , libid3tag
 , nixosTests
+# For tests
+, gtest
+, fetchpatch # used to fetch an upstream patch fixing a failing test
+, zip
 }:
 
 let
@@ -112,9 +116,28 @@ let
         sha256 = "0jnhjhm1ilpcwb4f58b8pgyzjq3dlr0j2xyk0zck0afwkdxyj9cb";
       };
 
+      # Won't be needed when 0.21.24 will be out
+      patches = [
+        # Tests fail otherwise, see https://github.com/MusicPlayerDaemon/MPD/issues/844
+        (fetchpatch {
+          url = "https://github.com/MusicPlayerDaemon/MPD/commit/7aea2853612743e111ae5e947c8d467049e291a8.patch";
+          sha256 = "1bmxlsaiz3wlg1yyc4rkwsmgvc0pirv0s1vdxxsn91yssmh16c2g";
+          excludes = [
+            # The patch fails otherwise because it tries to update the NEWS
+            # file which doesn't have the title "ver 0.21.24" yet.
+            "NEWS"
+          ];
+        })
+      ];
+
       buildInputs = [
         glib
         boost
+        # According to the configurePhase of meson, gtest is considered a
+        # runtime dependency. Quoting:
+        #
+        #    Run-time dependency GTest found: YES 1.10.0
+        gtest
       ]
         ++ (lib.concatLists (lib.attrVals features_ featureDependencies))
         ++ lib.optionals stdenv.isDarwin [ darwin.apple_sdk.frameworks.AudioToolbox darwin.apple_sdk.frameworks.AudioUnit ];
@@ -125,11 +148,21 @@ let
         pkg-config
       ];
 
+      # Otherwise, the meson log says:
+      #
+      #    Program zip found: NO
+      checkInputs = [ zip ];
+
+      doCheck = true;
+
       enableParallelBuilding = true;
 
       mesonAutoFeatures = "disabled";
-      mesonFlags =
-        map (x: "-D${x}=enabled") features_
+
+      mesonFlags = [
+        "-Dtest=true"
+      ]
+        ++ map (x: "-D${x}=enabled") features_
         ++ map (x: "-D${x}=disabled") (lib.subtractLists features_ knownFeatures)
         ++ lib.optional (builtins.elem "zeroconf" features_)
           "-Dzeroconf=avahi"

From 08bdd8bc434ea0bd2c6eb4fb1a3a74870d7307c5 Mon Sep 17 00:00:00 2001
From: Doron Behar <doron.behar@gmail.com>
Date: Sat, 16 May 2020 17:08:25 +0300
Subject: [PATCH 05/91] mpd: Build and install docs and split outputs

---
 pkgs/servers/mpd/default.nix | 10 ++++++++++
 1 file changed, 10 insertions(+)

diff --git a/pkgs/servers/mpd/default.nix b/pkgs/servers/mpd/default.nix
index bd28a7db3835..44118277a28b 100644
--- a/pkgs/servers/mpd/default.nix
+++ b/pkgs/servers/mpd/default.nix
@@ -19,6 +19,9 @@
 # Tag support
 , libid3tag
 , nixosTests
+# For documentation
+, doxygen
+, python3Packages # for sphinx-build
 # For tests
 , gtest
 , fetchpatch # used to fetch an upstream patch fixing a failing test
@@ -146,6 +149,8 @@ let
         meson
         ninja
         pkg-config
+        python3Packages.sphinx
+        doxygen
       ];
 
       # Otherwise, the meson log says:
@@ -159,7 +164,12 @@ let
 
       mesonAutoFeatures = "disabled";
 
+      outputs = [ "out" "doc" "man" ];
+
       mesonFlags = [
+        # Documentation is enabled unconditionally but it's not installed
+        # unconditionally thanks to the outputs being split
+        "-Ddocumentation=true"
         "-Dtest=true"
       ]
         ++ map (x: "-D${x}=enabled") features_

From 4eb8f4ece330734c59ee985f53e188aa894c22ac Mon Sep 17 00:00:00 2001
From: Robert Scott <code@humanleg.org.uk>
Date: Sat, 16 May 2020 22:05:02 +0100
Subject: [PATCH 06/91] aflplusplus: 2.64c -> 2.65c

---
 pkgs/tools/security/aflplusplus/default.nix | 16 +++-------------
 1 file changed, 3 insertions(+), 13 deletions(-)

diff --git a/pkgs/tools/security/aflplusplus/default.nix b/pkgs/tools/security/aflplusplus/default.nix
index f99be6d75758..ea32b6faf00e 100644
--- a/pkgs/tools/security/aflplusplus/default.nix
+++ b/pkgs/tools/security/aflplusplus/default.nix
@@ -17,26 +17,16 @@ let
   libtokencap = callPackage ./libtokencap.nix { inherit aflplusplus; };
   aflplusplus = stdenvNoCC.mkDerivation rec {
     pname = "aflplusplus";
-    version = "2.64c";
+    version = "2.65c";
 
     src = fetchFromGitHub {
       owner = "AFLplusplus";
       repo = "AFLplusplus";
       rev = version;
-      sha256 = "0n618pk6nlmkcbv1qm05fny4mnhcprrw0ppmra1phvk1y22iildj";
+      sha256 = "1np2a3kypb2m8nyv6qnij18yzn41pl8619jzydci40br4vxial9l";
     };
     enableParallelBuilding = true;
 
-    # build of unsigaction32 broken in 2.64c:
-    # https://github.com/AFLplusplus/AFLplusplus/commit/079fdbf9bc5be1adba19e4bd08be965bd4dd79dc#commitcomment-38428357
-    # The applied patch fixes it.
-    patches = [
-      (fetchpatch {
-        url = "https://github.com/AFLplusplus/AFLplusplus/commit/5b9928f1a9d4b017ea04365ca8b522fde71236eb.patch";
-        sha256 = "1m4w9w4jaxb2mjkwvr6r4qa2j5cdzzpchjphpwd95861h0zvb6hh";
-      })
-    ];
-
     # Note: libcgroup isn't needed for building, just for the afl-cgroup
     # script.
     nativeBuildInputs = [ makeWrapper which clang_9 gcc ];
@@ -123,7 +113,7 @@ let
         --replace '../libcompcov.so' '`$out/bin/get-afl-qemu-libcompcov-so`' \
         --replace '../libdislocator.so' '`$out/bin/get-libdislocator-so`' \
         --replace '../libtokencap.so' '`$out/bin/get-libtokencap-so`'
-      perl -pi -e 's|(?<!\.)(\.\./)([^\s\/]+?)(?<!\.c)(?<!\.s?o)(?=\s)|\$out/bin/\2|g' test/test.sh
+      perl -pi -e 's|(?<!\.)(?<!-I)(\.\./)([^\s\/]+?)(?<!\.c)(?<!\.s?o)(?=\s)|\$out/bin/\2|g' test/test.sh
       cd test && ./test.sh
     '';
 

From 5f19ec3bc4f93a2408c7f46c73cd0659bca604be Mon Sep 17 00:00:00 2001
From: Robert Scott <code@humanleg.org.uk>
Date: Sat, 16 May 2020 22:07:46 +0100
Subject: [PATCH 07/91] aflplusplus: don't run unit tests with cmocka

i don't think running the unit tests really adds anything given that we
have proper integration tests working, and it just introduces another
build dependency and possibility for spurious breakage.
---
 pkgs/tools/security/aflplusplus/default.nix | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/pkgs/tools/security/aflplusplus/default.nix b/pkgs/tools/security/aflplusplus/default.nix
index ea32b6faf00e..332e79e70e1d 100644
--- a/pkgs/tools/security/aflplusplus/default.nix
+++ b/pkgs/tools/security/aflplusplus/default.nix
@@ -1,6 +1,6 @@
 { stdenv, stdenvNoCC, fetchFromGitHub, callPackage, makeWrapper
 , clang_9, llvm_9, gcc, which, libcgroup, python, perl, gmp
-, file, cmocka, wine ? null, fetchpatch
+, file, wine ? null, fetchpatch
 }:
 
 # wine fuzzing is only known to work for win32 binaries, and using a mixture of
@@ -105,7 +105,7 @@ let
         wrapPythonProgramsIn $out/bin ${python.pkgs.pefile}
     '';
 
-    installCheckInputs = [ perl file cmocka ];
+    installCheckInputs = [ perl file ];
     doInstallCheck = true;
     installCheckPhase = ''
       # replace references to tools in build directory with references to installed locations

From d478d7a65b359e405b334e4b36845283e7c0b2cf Mon Sep 17 00:00:00 2001
From: Robert Scott <code@humanleg.org.uk>
Date: Sat, 16 May 2020 22:13:56 +0100
Subject: [PATCH 08/91] aflplusplus: remove clang_9 and llvm_9 specificity

i've successfully built this with llvm 8 and 6 now - make this easier to
override
---
 pkgs/tools/security/aflplusplus/default.nix | 10 +++++-----
 pkgs/top-level/all-packages.nix             |  3 ++-
 2 files changed, 7 insertions(+), 6 deletions(-)

diff --git a/pkgs/tools/security/aflplusplus/default.nix b/pkgs/tools/security/aflplusplus/default.nix
index 332e79e70e1d..a0ef58ae8b61 100644
--- a/pkgs/tools/security/aflplusplus/default.nix
+++ b/pkgs/tools/security/aflplusplus/default.nix
@@ -1,5 +1,5 @@
 { stdenv, stdenvNoCC, fetchFromGitHub, callPackage, makeWrapper
-, clang_9, llvm_9, gcc, which, libcgroup, python, perl, gmp
+, clang, llvm, gcc, which, libcgroup, python, perl, gmp
 , file, wine ? null, fetchpatch
 }:
 
@@ -29,16 +29,16 @@ let
 
     # Note: libcgroup isn't needed for building, just for the afl-cgroup
     # script.
-    nativeBuildInputs = [ makeWrapper which clang_9 gcc ];
-    buildInputs = [ llvm_9 python gmp ]
+    nativeBuildInputs = [ makeWrapper which clang gcc ];
+    buildInputs = [ llvm python gmp ]
       ++ stdenv.lib.optional (wine != null) python.pkgs.wrapPython;
 
 
     postPatch = ''
       # Replace the CLANG_BIN variables with the correct path
       substituteInPlace llvm_mode/afl-clang-fast.c \
-        --replace "CLANGPP_BIN" '"${clang_9}/bin/clang++"' \
-        --replace "CLANG_BIN" '"${clang_9}/bin/clang"' \
+        --replace "CLANGPP_BIN" '"${clang}/bin/clang++"' \
+        --replace "CLANG_BIN" '"${clang}/bin/clang"' \
         --replace 'getenv("AFL_PATH")' "(getenv(\"AFL_PATH\") ? getenv(\"AFL_PATH\") : \"$out/lib/afl\")"
 
       # Replace "gcc" and friends with full paths in afl-gcc
diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix
index 51dec492b21e..296f442ec908 100644
--- a/pkgs/top-level/all-packages.nix
+++ b/pkgs/top-level/all-packages.nix
@@ -588,7 +588,8 @@ in
   };
 
   aflplusplus = callPackage ../tools/security/aflplusplus {
-    stdenv = clangStdenv;
+    clang = clang_9;
+    llvm = llvm_9;
     python = python37;
     wine = null;
   };

From b7a8c4d8574a9295c530b7889493a629fd7f9804 Mon Sep 17 00:00:00 2001
From: Mario Rodas <marsam@users.noreply.github.com>
Date: Wed, 20 May 2020 00:00:00 -0500
Subject: [PATCH 09/91] bazel-watcher: 0.13.0 -> 0.13.1

---
 pkgs/development/tools/bazel-watcher/default.nix | 10 +++-------
 1 file changed, 3 insertions(+), 7 deletions(-)

diff --git a/pkgs/development/tools/bazel-watcher/default.nix b/pkgs/development/tools/bazel-watcher/default.nix
index 98675d98d576..f331272a5f31 100644
--- a/pkgs/development/tools/bazel-watcher/default.nix
+++ b/pkgs/development/tools/bazel-watcher/default.nix
@@ -1,13 +1,9 @@
 { buildBazelPackage
 , fetchFromGitHub
-, fetchpatch
 , git
 , go
 , python
 , stdenv
-, iana-etc
-, mailcap
-, tzdata
 }:
 
 let
@@ -17,13 +13,13 @@ let
 in
 buildBazelPackage rec {
   name = "bazel-watcher-${version}";
-  version = "0.13.0";
+  version = "0.13.1";
 
   src = fetchFromGitHub {
     owner = "bazelbuild";
     repo = "bazel-watcher";
     rev = "v${version}";
-    sha256 = "1fc3sp79znbbq1yjap56lham72n7cap8yfghpzrzmpl5brybjkvm";
+    sha256 = "0n28q27510ymg5d455hrbk7z8wawszgjmqjjhb4zximqhvxks7kh";
   };
 
   nativeBuildInputs = [ go git python ];
@@ -60,7 +56,7 @@ buildBazelPackage rec {
       sed -e '/^FILE:@bazel_gazelle_go_repository_tools.*/d' -i $bazelOut/external/\@*.marker
     '';
 
-    sha256 = "0i77nnbd1sd39qw4vm3n5mwkag3dskqjhzr7qs4w1arbiih45zd4";
+    sha256 = "16zgjd6zww9skk34ggfx5l3kbsdyv98zxawrvmx1arv5gaj63pp9";
   };
 
   buildAttrs = {

From feaac81f01b72e088c0382a345ea108b79ef16a3 Mon Sep 17 00:00:00 2001
From: Izorkin <izorkin@elven.pw>
Date: Fri, 15 May 2020 12:24:25 +0300
Subject: [PATCH 10/91] mariadb: 10.4.12 -> 10.4.13

---
 pkgs/servers/sql/mariadb/default.nix | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/pkgs/servers/sql/mariadb/default.nix b/pkgs/servers/sql/mariadb/default.nix
index ac9772922ec2..d808541bbc14 100644
--- a/pkgs/servers/sql/mariadb/default.nix
+++ b/pkgs/servers/sql/mariadb/default.nix
@@ -23,14 +23,14 @@ mariadb = server // {
 };
 
 common = rec { # attributes common to both builds
-  version = "10.4.12";
+  version = "10.4.13";
 
   src = fetchurl {
     urls = [
       "https://downloads.mariadb.org/f/mariadb-${version}/source/mariadb-${version}.tar.gz"
       "https://downloads.mariadb.com/MariaDB/mariadb-${version}/source/mariadb-${version}.tar.gz"
     ];
-    sha256 = "0252b9rxxz1ljjv6ni0wwgy14j8qmmdd2sq0a65dslx2ib9y3wgy";
+    sha256 = "1pwibmm52sc04qxp832pc3ylxw9wq90fjc7nxpcyp3yys49bpfs5";
     name   = "mariadb-${version}.tar.gz";
   };
 
@@ -94,7 +94,7 @@ common = rec { # attributes common to both builds
     rm "$out"/bin/{mariadb_config,mysql_config}
     rm -r $out/include
     rm -r $out/lib/pkgconfig
-    rm -r $out/share/{aclocal,pkgconfig}
+    rm -r $out/share/aclocal
   '';
 
   enableParallelBuilding = true;

From 2f0396776e6815df3c26a6648e91402c7e427133 Mon Sep 17 00:00:00 2001
From: Izorkin <izorkin@elven.pw>
Date: Fri, 15 May 2020 12:25:18 +0300
Subject: [PATCH 11/91] mariadb: change directory installing pam

---
 pkgs/servers/sql/mariadb/default.nix | 2 ++
 1 file changed, 2 insertions(+)

diff --git a/pkgs/servers/sql/mariadb/default.nix b/pkgs/servers/sql/mariadb/default.nix
index d808541bbc14..9af4fe0f0f1a 100644
--- a/pkgs/servers/sql/mariadb/default.nix
+++ b/pkgs/servers/sql/mariadb/default.nix
@@ -72,6 +72,8 @@ common = rec { # attributes common to both builds
     "-DINSTALL_SUPPORTFILESDIR=share/doc/mysql"
     "-DINSTALL_MYSQLTESTDIR=OFF"
     "-DINSTALL_SQLBENCHDIR=OFF"
+    "-DINSTALL_PAMDIR=share/pam/lib/security"
+    "-DINSTALL_PAMDATADIR=share/pam/etc/security"
 
     "-DWITH_ZLIB=system"
     "-DWITH_SSL=system"

From a1ec0288122ab8e1ebcf800a0c4fadcf51c87414 Mon Sep 17 00:00:00 2001
From: Izorkin <izorkin@elven.pw>
Date: Fri, 15 May 2020 12:27:27 +0300
Subject: [PATCH 12/91] mariadb: move mariadb_mtr to share/pam

---
 .../sql/mariadb/cmake-disable-auth-pam-testing.patch | 12 ------------
 pkgs/servers/sql/mariadb/default.nix                 |  8 ++++----
 2 files changed, 4 insertions(+), 16 deletions(-)
 delete mode 100644 pkgs/servers/sql/mariadb/cmake-disable-auth-pam-testing.patch

diff --git a/pkgs/servers/sql/mariadb/cmake-disable-auth-pam-testing.patch b/pkgs/servers/sql/mariadb/cmake-disable-auth-pam-testing.patch
deleted file mode 100644
index 864ee818d3c1..000000000000
--- a/pkgs/servers/sql/mariadb/cmake-disable-auth-pam-testing.patch
+++ /dev/null
@@ -1,12 +0,0 @@
-diff --git a/plugin/auth_pam/CMakeLists.txt b/plugin/auth_pam/CMakeLists.txt
-index a556b870..918a26f9 100644
---- a/plugin/auth_pam/CMakeLists.txt
-+++ b/plugin/auth_pam/CMakeLists.txt
-@@ -22,7 +22,6 @@ IF(HAVE_PAM_APPL_H)
-                    COMPONENT Server)
-   ENDIF()
-   IF(TARGET auth_pam OR TARGET auth_pam_v1)
--    ADD_SUBDIRECTORY(testing)
-     ADD_LIBRARY(pam_user_map MODULE mapper/pam_user_map.c)
-     TARGET_LINK_LIBRARIES(pam_user_map pam)
-     SET_TARGET_PROPERTIES (pam_user_map PROPERTIES PREFIX "")
diff --git a/pkgs/servers/sql/mariadb/default.nix b/pkgs/servers/sql/mariadb/default.nix
index 9af4fe0f0f1a..9c2134e211ff 100644
--- a/pkgs/servers/sql/mariadb/default.nix
+++ b/pkgs/servers/sql/mariadb/default.nix
@@ -162,10 +162,7 @@ server = stdenv.mkDerivation (common // {
     ++ optional stdenv.hostPlatform.isLinux linux-pam
     ++ optional (!stdenv.hostPlatform.isDarwin) mytopEnv;
 
-  patches = common.patches ++ [
-    # Disable build unused plugin pam_mariadb_mtr.so. See https://jira.mariadb.org/browse/MDEV-21654
-    ./cmake-disable-auth-pam-testing.patch
-  ] ++ optionals stdenv.hostPlatform.isDarwin [
+  patches = common.patches ++ optionals stdenv.hostPlatform.isDarwin [
     ./cmake-without-plugin-auth-pam.patch
   ];
 
@@ -204,6 +201,9 @@ server = stdenv.mkDerivation (common // {
     chmod +x "$out"/bin/wsrep_sst_common
     rm "$out"/bin/{mariadb-client-test,mariadb-test,mysql_client_test,mysqltest}
     rm -r "$out"/data # Don't need testing data
+    mv "$out"/OFF/suite/plugins/pam/pam_mariadb_mtr.so "$out"/share/pam/lib/security
+    mv "$out"/OFF/suite/plugins/pam/mariadb_mtr "$out"/share/pam/etc/security
+    rm -r "$out"/OFF
   '' + optionalString withStorageMroonga ''
     mv "$out"/share/{groonga,groonga-normalizer-mysql} "$out"/share/doc/mysql
   '' + optionalString (!stdenv.hostPlatform.isDarwin) ''

From f23e4bdc567a204a7ef5767b9d36d642ace9a13c Mon Sep 17 00:00:00 2001
From: Izorkin <izorkin@elven.pw>
Date: Thu, 21 May 2020 18:16:42 +0300
Subject: [PATCH 13/91] mariadb-galera: 26.4.3 -> 26.4.5

---
 pkgs/servers/sql/mariadb/galera/default.nix | 5 ++---
 1 file changed, 2 insertions(+), 3 deletions(-)

diff --git a/pkgs/servers/sql/mariadb/galera/default.nix b/pkgs/servers/sql/mariadb/galera/default.nix
index 6c3a1af907dd..14ab75d159b2 100644
--- a/pkgs/servers/sql/mariadb/galera/default.nix
+++ b/pkgs/servers/sql/mariadb/galera/default.nix
@@ -10,13 +10,13 @@ let
 
 in stdenv.mkDerivation rec {
   pname = "mariadb-galera";
-  version = "26.4.3";
+  version = "26.4.5";
 
   src = fetchFromGitHub {
     owner = "codership";
     repo = "galera";
     rev = "release_${version}";
-    sha256 = "1r0b4kxgqrivnwm4hprnpscb16v6l6j8cnvk4i8c64fig1ly8g3j";
+    sha256 = "10sir0hxxglw9jsjrclfgrqm8n5zng6rwj2fgff141x9n9l55w7l";
     fetchSubmodules = true;
   };
 
@@ -48,7 +48,6 @@ in stdenv.mkDerivation rec {
     install -m 444 "LICENSE"                          "$out/$GALERA_LICENSE_DIR/GPLv2"
     install -m 444 "asio/LICENSE_1_0.txt"             "$out/$GALERA_LICENSE_DIR/LICENSE.asio"
     install -m 444 "www.evanjones.ca/LICENSE"         "$out/$GALERA_LICENSE_DIR/LICENSE.crc32c"
-    install -m 444 "chromium/LICENSE"                 "$out/$GALERA_LICENSE_DIR/LICENSE.chromium"
   '';
 
   meta = with stdenv.lib; {

From 5653677f0aae73d49d9e0adfc6a843bc7f7ec72d Mon Sep 17 00:00:00 2001
From: Izorkin <izorkin@elven.pw>
Date: Sat, 23 May 2020 16:32:54 +0300
Subject: [PATCH 14/91] nixos/tests/mysql57: add check with unix auth

---
 nixos/tests/mysql/mysql.nix | 48 ++++++++++++++++++++++++++++++-------
 1 file changed, 39 insertions(+), 9 deletions(-)

diff --git a/nixos/tests/mysql/mysql.nix b/nixos/tests/mysql/mysql.nix
index d236ce946328..5379998b6b02 100644
--- a/nixos/tests/mysql/mysql.nix
+++ b/nixos/tests/mysql/mysql.nix
@@ -5,20 +5,34 @@ import ./../make-test-python.nix ({ pkgs, ...} : {
   };
 
   nodes = {
-    mysql =
+    mysql57 =
       { pkgs, ... }:
 
       {
+        users.users.testuser = { };
+        users.users.testuser2 = { };
         services.mysql.enable = true;
         services.mysql.initialDatabases = [
-          { name = "testdb"; schema = ./testdb.sql; }
-          { name = "empty_testdb"; }
+          { name = "testdb3"; schema = ./testdb.sql; }
         ];
         # note that using pkgs.writeText here is generally not a good idea,
         # as it will store the password in world-readable /nix/store ;)
         services.mysql.initialScript = pkgs.writeText "mysql-init.sql" ''
-          CREATE USER 'passworduser'@'localhost' IDENTIFIED BY 'password123';
+          CREATE USER 'testuser3'@'localhost' IDENTIFIED BY 'secure';
+          GRANT ALL PRIVILEGES ON testdb3.* TO 'testuser3'@'localhost';
         '';
+        services.mysql.ensureDatabases = [ "testdb" "testdb2" ];
+        services.mysql.ensureUsers = [{
+          name = "testuser";
+          ensurePermissions = {
+            "testdb.*" = "ALL PRIVILEGES";
+          };
+        } {
+          name = "testuser2";
+          ensurePermissions = {
+            "testdb2.*" = "ALL PRIVILEGES";
+          };
+        }];
         services.mysql.package = pkgs.mysql57;
       };
 
@@ -81,11 +95,27 @@ import ./../make-test-python.nix ({ pkgs, ...} : {
   testScript = ''
     start_all()
 
-    mysql.wait_for_unit("mysql")
-    mysql.succeed("echo 'use empty_testdb;' | mysql -u root")
-    mysql.succeed("echo 'use testdb; select * from tests;' | mysql -u root -N | grep 4")
-    # ';' acts as no-op, just check whether login succeeds with the user created from the initialScript
-    mysql.succeed("echo ';' | mysql -u passworduser --password=password123")
+    mysql57.wait_for_unit("mysql")
+    mysql57.succeed(
+        "echo 'use testdb; create table tests (test_id INT, PRIMARY KEY (test_id));' | sudo -u testuser mysql -u testuser"
+    )
+    mysql57.succeed(
+        "echo 'use testdb; insert into tests values (41);' | sudo -u testuser mysql -u testuser"
+    )
+    # Ensure testuser2 is not able to insert into testdb as mysql testuser2
+    mysql57.fail(
+        "echo 'use testdb; insert into tests values (22);' | sudo -u testuser2 mysql -u testuser2"
+    )
+    # Ensure testuser2 is not able to authenticate as mysql testuser
+    mysql57.fail(
+        "echo 'use testdb; insert into tests values (22);' | sudo -u testuser2 mysql -u testuser"
+    )
+    mysql57.succeed(
+        "echo 'use testdb; select test_id from tests;' | sudo -u testuser mysql -u testuser -N | grep 41"
+    )
+    mysql57.succeed(
+        "echo 'use testdb3; select * from tests;' | mysql -u testuser3 --password=secure -N | grep 4"
+    )
 
     mysql80.wait_for_unit("mysql")
     mysql80.succeed("echo 'use empty_testdb;' | mysql -u root")

From 0342862b9150aae89150f198e53e08ce777a3738 Mon Sep 17 00:00:00 2001
From: Izorkin <izorkin@elven.pw>
Date: Sat, 23 May 2020 16:44:02 +0300
Subject: [PATCH 15/91] nixos/tests/mysql80: add check with unix auth

---
 nixos/tests/mysql/mysql.nix | 44 +++++++++++++++++++++++++++++++------
 1 file changed, 37 insertions(+), 7 deletions(-)

diff --git a/nixos/tests/mysql/mysql.nix b/nixos/tests/mysql/mysql.nix
index 5379998b6b02..50e1c76e9fd0 100644
--- a/nixos/tests/mysql/mysql.nix
+++ b/nixos/tests/mysql/mysql.nix
@@ -44,16 +44,30 @@ import ./../make-test-python.nix ({ pkgs, ...} : {
         # Kernel panic - not syncing: Out of memory: compulsory panic_on_oom is enabled
         virtualisation.memorySize = 1024;
 
+        users.users.testuser = { };
+        users.users.testuser2 = { };
         services.mysql.enable = true;
         services.mysql.initialDatabases = [
-          { name = "testdb"; schema = ./testdb.sql; }
-          { name = "empty_testdb"; }
+          { name = "testdb3"; schema = ./testdb.sql; }
         ];
         # note that using pkgs.writeText here is generally not a good idea,
         # as it will store the password in world-readable /nix/store ;)
         services.mysql.initialScript = pkgs.writeText "mysql-init.sql" ''
-          CREATE USER 'passworduser'@'localhost' IDENTIFIED BY 'password123';
+          CREATE USER 'testuser3'@'localhost' IDENTIFIED BY 'secure';
+          GRANT ALL PRIVILEGES ON testdb3.* TO 'testuser3'@'localhost';
         '';
+        services.mysql.ensureDatabases = [ "testdb" "testdb2" ];
+        services.mysql.ensureUsers = [{
+          name = "testuser";
+          ensurePermissions = {
+            "testdb.*" = "ALL PRIVILEGES";
+          };
+        } {
+          name = "testuser2";
+          ensurePermissions = {
+            "testdb2.*" = "ALL PRIVILEGES";
+          };
+        }];
         services.mysql.package = pkgs.mysql80;
       };
 
@@ -118,10 +132,26 @@ import ./../make-test-python.nix ({ pkgs, ...} : {
     )
 
     mysql80.wait_for_unit("mysql")
-    mysql80.succeed("echo 'use empty_testdb;' | mysql -u root")
-    mysql80.succeed("echo 'use testdb; select * from tests;' | mysql -u root -N | grep 4")
-    # ';' acts as no-op, just check whether login succeeds with the user created from the initialScript
-    mysql80.succeed("echo ';' | mysql -u passworduser --password=password123")
+    mysql80.succeed(
+        "echo 'use testdb; create table tests (test_id INT, PRIMARY KEY (test_id));' | sudo -u testuser mysql -u testuser"
+    )
+    mysql80.succeed(
+        "echo 'use testdb; insert into tests values (41);' | sudo -u testuser mysql -u testuser"
+    )
+    # Ensure testuser2 is not able to insert into testdb as mysql testuser2
+    mysql80.fail(
+        "echo 'use testdb; insert into tests values (22);' | sudo -u testuser2 mysql -u testuser2"
+    )
+    # Ensure testuser2 is not able to authenticate as mysql testuser
+    mysql80.fail(
+        "echo 'use testdb; insert into tests values (22);' | sudo -u testuser2 mysql -u testuser"
+    )
+    mysql80.succeed(
+        "echo 'use testdb; select test_id from tests;' | sudo -u testuser mysql -u testuser -N | grep 41"
+    )
+    mysql80.succeed(
+        "echo 'use testdb3; select * from tests;' | mysql -u testuser3 --password=secure -N | grep 4"
+    )
 
     mariadb.wait_for_unit("mysql")
     mariadb.succeed(

From 3704ed1750c31733a9d46580cc406dac622905bb Mon Sep 17 00:00:00 2001
From: Edmund Wu <fangkazuto@gmail.com>
Date: Fri, 29 May 2020 22:21:04 -0400
Subject: [PATCH 16/91] vscode-utils: remove extra whitespace

---
 pkgs/misc/vscode-extensions/vscode-utils.nix | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/pkgs/misc/vscode-extensions/vscode-utils.nix b/pkgs/misc/vscode-extensions/vscode-utils.nix
index 743ae13a3e4a..7ea76309f145 100644
--- a/pkgs/misc/vscode-extensions/vscode-utils.nix
+++ b/pkgs/misc/vscode-extensions/vscode-utils.nix
@@ -18,7 +18,7 @@ let
     buildInputs ? [],
     ...
   }:
-  stdenv.mkDerivation ((removeAttrs a [ "vscodeExtUniqueId" ]) //  {
+  stdenv.mkDerivation ((removeAttrs a [ "vscodeExtUniqueId" ]) // {
 
     name = namePrefix + name;
 
@@ -80,7 +80,7 @@ let
    vscodeDefault = vscode;
   };
 
-  
+
   vscodeExts2nix = import ./vscodeExts2nix.nix {
     inherit lib writeShellScriptBin;
     vscodeDefault = vscode;
@@ -90,7 +90,7 @@ let
     inherit lib buildEnv writeShellScriptBin extensionsFromVscodeMarketplace jq;
     vscodeDefault = vscode;
   };
-in 
+in
 {
   inherit fetchVsixFromVscodeMarketplace buildVscodeExtension
           buildVscodeMarketplaceExtension extensionFromVscodeMarketplace

From 0717848d7bb5adb01c7a9f293ed07676099de6f2 Mon Sep 17 00:00:00 2001
From: Edmund Wu <fangkazuto@gmail.com>
Date: Fri, 29 May 2020 22:22:39 -0400
Subject: [PATCH 17/91] vscode-with-extensions: fix extension directory

---
 pkgs/applications/editors/vscode/with-extensions.nix | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/pkgs/applications/editors/vscode/with-extensions.nix b/pkgs/applications/editors/vscode/with-extensions.nix
index 5dcd1f6fb783..c30b52782ef3 100644
--- a/pkgs/applications/editors/vscode/with-extensions.nix
+++ b/pkgs/applications/editors/vscode/with-extensions.nix
@@ -70,6 +70,6 @@ runCommand "${wrappedPkgName}-with-extensions-${wrappedPkgVersion}" {
   ln -sT "${vscode}/share/applications/${executableName}.desktop" "$out/share/applications/${executableName}.desktop"
   ln -sT "${vscode}/share/applications/${executableName}-url-handler.desktop" "$out/share/applications/${executableName}-url-handler.desktop"
   makeWrapper "${vscode}/bin/${executableName}" "$out/bin/${executableName}" ${lib.optionalString (vscodeExtensions != []) ''
-    --add-flags "--extensions-dir ${combinedExtensionsDrv}"
+    --add-flags "--extensions-dir ${combinedExtensionsDrv}/share/vscode/extensions"
   ''}
 ''

From 4f99c5725e8a01f0d31a90e880495c19f6b530e7 Mon Sep 17 00:00:00 2001
From: Edmund Wu <fangkazuto@gmail.com>
Date: Sat, 30 May 2020 16:50:15 -0400
Subject: [PATCH 18/91] vscode-extensions.vscode-utils: reapply some changes
 from bb24faf

https://github.com/NixOS/nixpkgs/commit/bb24fafbfad04cd23431de14176cdc581a906f66
---
 pkgs/misc/vscode-extensions/vscode-utils.nix | 9 ++-------
 1 file changed, 2 insertions(+), 7 deletions(-)

diff --git a/pkgs/misc/vscode-extensions/vscode-utils.nix b/pkgs/misc/vscode-extensions/vscode-utils.nix
index 7ea76309f145..1de3bce3d0db 100644
--- a/pkgs/misc/vscode-extensions/vscode-utils.nix
+++ b/pkgs/misc/vscode-extensions/vscode-utils.nix
@@ -1,12 +1,7 @@
 { stdenv, lib, buildEnv, writeShellScriptBin, fetchurl, vscode, unzip, jq }:
 let
-  extendedPkgVersion = lib.getVersion vscode;
-  extendedPkgName = lib.removeSuffix "-${extendedPkgVersion}" vscode.name;
-
-
   buildVscodeExtension = a@{
     name,
-    namePrefix ? "${extendedPkgName}-extension-",
     src,
     # Same as "Unique Identifier" on the extension's web page.
     # For the moment, only serve as unique extension dir.
@@ -20,12 +15,12 @@ let
   }:
   stdenv.mkDerivation ((removeAttrs a [ "vscodeExtUniqueId" ]) // {
 
-    name = namePrefix + name;
+    name = "vscode-extension-${name}";
 
     inherit vscodeExtUniqueId;
     inherit configurePhase buildPhase dontPatchELF dontStrip;
 
-    installPrefix = "share/${extendedPkgName}/extensions/${vscodeExtUniqueId}";
+    installPrefix = "share/vscode/extensions/${vscodeExtUniqueId}";
 
     buildInputs = [ unzip ] ++ buildInputs;
 

From 094bd40da52f027be9b02b1e4cf286a9957cfb52 Mon Sep 17 00:00:00 2001
From: Riley Inman <rileyminman@gmail.com>
Date: Sun, 31 May 2020 18:23:45 -0400
Subject: [PATCH 19/91] plex: 1.19.2.2737-b69929dab -> 1.19.3.2852-219a9974e

---
 pkgs/servers/plex/raw.nix | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/pkgs/servers/plex/raw.nix b/pkgs/servers/plex/raw.nix
index cdeaaa77c059..aa8bac28bbdc 100644
--- a/pkgs/servers/plex/raw.nix
+++ b/pkgs/servers/plex/raw.nix
@@ -8,13 +8,13 @@
 # server, and the FHS userenv and corresponding NixOS module should
 # automatically pick up the changes.
 stdenv.mkDerivation rec {
-  version = "1.19.2.2737-b69929dab";
+  version = "1.19.3.2852-219a9974e";
   pname = "plexmediaserver";
 
   # Fetch the source
   src = fetchurl {
     url = "https://downloads.plex.tv/plex-media-server-new/${version}/redhat/plexmediaserver-${version}.x86_64.rpm";
-    sha256 = "00s3ab66wnpwkjrp0ng8srcy3l32sh5ibv0i9m6l4d0a19hr01fs";
+    sha256 = "0sp7lnzf3zrwdmcg54mpvml89q1cbaq6s1cl9gj2z31xfiz07a26";
   };
 
   outputs = [ "out" "basedb" ];

From da540dbb7019e6a7f87ab28dbd6da5d16f13c32d Mon Sep 17 00:00:00 2001
From: Peter Hoeg <peter@hoeg.com>
Date: Wed, 3 Jun 2020 15:15:17 +0800
Subject: [PATCH 20/91] libreoffce-qt: init at 6.4.3.2

---
 .../office/libreoffice/default.nix            | 76 ++++++++++++++-----
 pkgs/top-level/all-packages.nix               |  8 ++
 2 files changed, 66 insertions(+), 18 deletions(-)

diff --git a/pkgs/applications/office/libreoffice/default.nix b/pkgs/applications/office/libreoffice/default.nix
index 976fc0fcd2d7..1fefb46692d7 100644
--- a/pkgs/applications/office/libreoffice/default.nix
+++ b/pkgs/applications/office/libreoffice/default.nix
@@ -1,12 +1,12 @@
 { stdenv, fetchurl, fetchpatch, pam, python3, libxslt, perl, ArchiveZip, gettext
 , IOCompress, zlib, libjpeg, expat, freetype, libwpd
 , libxml2, db, curl, fontconfig, libsndfile, neon
-, bison, flex, zip, unzip, gtk3, gtk2, libmspack, getopt, file, cairo, which
+, bison, flex, zip, unzip, gtk3, libmspack, getopt, file, cairo, which
 , icu, boost, jdk, ant, cups, xorg, libcmis, fontforge
 , openssl, gperf, cppunit, poppler, utillinux
 , librsvg, libGLU, libGL, bsh, CoinMP, libwps, libabw, libmysqlclient
 , autoconf, automake, openldap, bash, hunspell, librdf_redland, nss, nspr
-, libwpg, dbus-glib, qt4, clucene_core, libcdr, lcms, vigra
+, libwpg, dbus-glib, clucene_core, libcdr, lcms, vigra
 , unixODBC, mdds, sane-backends, mythes, libexttextcat, libvisio
 , fontsConf, pkgconfig, bluez5, libtool, carlito
 , libatomic_ops, graphite2, harfbuzz, libodfgen, libzmf
@@ -15,7 +15,8 @@
 , gnome3, glib, ncurses, epoxy, gpgme
 , langs ? [ "ca" "cs" "de" "en-GB" "en-US" "eo" "es" "fr" "hu" "it" "ja" "nl" "pl" "pt" "pt-BR" "ru" "sl" "zh-CN" ]
 , withHelp ? true
-, kdeIntegration ? false
+, kdeIntegration ? false, mkDerivation ? null, qtbase ? null, qtx11extras ? null
+, ki18n ? null, kconfig ? null, kcoreaddons ? null, kio ? null, kwindowsystem ? null
 , variant ? "fresh"
 } @ args:
 
@@ -31,6 +32,8 @@ let
   lib = stdenv.lib;
   langsSpaces = lib.concatStringsSep " " langs;
 
+  mkDrv = if kdeIntegration then mkDerivation else stdenv.mkDerivation;
+
   srcs = {
     third_party =
       map (x : ((fetchurl {inherit (x) url sha256 name;}) // {inherit (x) md5name md5;}))
@@ -47,7 +50,7 @@ let
     translations = primary-src.translations;
     help = primary-src.help;
   };
-in (stdenv.mkDerivation rec {
+in (mkDrv rec {
   pname = "libreoffice";
   inherit version;
 
@@ -57,8 +60,9 @@ in (stdenv.mkDerivation rec {
 
   # For some reason librdf_redland sometimes refers to rasqal.h instead
   # of rasqal/rasqal.h
-  NIX_CFLAGS_COMPILE = "-I${librdf_rasqal}/include/rasqal"
-    + stdenv.lib.optionalString stdenv.isx86_64 " -mno-fma";
+  NIX_CFLAGS_COMPILE = [
+    "-I${librdf_rasqal}/include/rasqal"
+  ] ++ lib.optional stdenv.isx86_64 "-mno-fma";
 
   patches = [
     ./xdg-open-brief.patch
@@ -84,8 +88,20 @@ in (stdenv.mkDerivation rec {
     tar -xf ${srcs.translations}
   '';
 
-  postPatch = ''
-    sed -e 's@/usr/bin/xdg-open@xdg-open@g' -i shell/source/unix/exec/shellexec.cxx
+  ### QT/KDE
+  #
+  # We have to resort to the ugly patching of configure.ac as it assumes that
+  # the first directory that contains headers and libraries during the check
+  # contains all the relevant headers/libs which doesn't work with both as they
+  # are in multiple directories due to each having their own derivation.
+  postPatch = let
+    inc = e: path:
+      "${e.dev}/include/KF5/${path}";
+    libs = list:
+      lib.concatMapStringsSep " " (e: "-L${e.out}/lib") list;
+  in ''
+    substituteInPlace shell/source/unix/exec/shellexec.cxx \
+      --replace /usr/bin/xdg-open ${if kdeIntegration then "kde-open5" else "xdg-open"}
 
     # configure checks for header 'gpgme++/gpgmepp_version.h',
     # and if it is found (no matter where) uses a hardcoded path
@@ -96,9 +112,24 @@ in (stdenv.mkDerivation rec {
     substituteInPlace configure.ac --replace \
       'GPGMEPP_CFLAGS=-I/usr/include/gpgme++' \
       'GPGMEPP_CFLAGS=-I${gpgme.dev}/include/gpgme++'
+  '' + lib.optionalString kdeIntegration ''
+      substituteInPlace configure.ac \
+        --replace '$QT5INC'             ${qtbase.dev}/include \
+        --replace '$QT5LIB'             ${qtbase.out}/lib \
+        --replace '-I$qt5_incdir '      '-I${qtx11extras.dev}/include '\
+        --replace '-L$qt5_libdir '      '${libs [ qtbase qtx11extras ]} ' \
+        --replace '$KF5INC'             ${kcoreaddons.dev}/include \
+        --replace '$KF5LIB'             ${kcoreaddons.out}/lib \
+        --replace '$kf5_incdir/KCore'   ${inc kcoreaddons "KCore"} \
+        --replace '$kf5_incdir/KI18n'   ${inc ki18n "KI18n"} \
+        --replace '$kf5_incdir/KConfig' ${inc kconfig "KConfig"} \
+        --replace '$kf5_incdir/KWindow' ${inc kwindowsystem "KWindow"} \
+        --replace '$kf5_incdir/KIO'     ${inc kio "KIO"} \
+        --replace '-L$kf5_libdir '      '${libs [ kconfig kcoreaddons ki18n kio kwindowsystem ]} '
   '';
 
-  QT4DIR = qt4;
+  dontUseCmakeConfigure = true;
+  dontUseCmakeBuildDir = true;
 
   preConfigure = ''
     configureFlagsArray=(
@@ -264,14 +295,16 @@ in (stdenv.mkDerivation rec {
     ln -s $out/lib/libreoffice/share/xdg $out/share/applications
 
     for f in $out/share/applications/*.desktop; do
-      substituteInPlace "$f" --replace "Exec=libreofficedev${major}.${minor}" "Exec=libreoffice"
-      substituteInPlace "$f" --replace "Exec=libreoffice${major}.${minor}" "Exec=libreoffice"
-      substituteInPlace "$f" --replace "Exec=libreoffice" "Exec=libreoffice"
+      substituteInPlace "$f" \
+        --replace "Exec=libreofficedev${major}.${minor}" "Exec=libreoffice" \
+        --replace "Exec=libreoffice${major}.${minor}"    "Exec=libreoffice"
     done
 
     cp -r sysui/desktop/icons  "$out/share"
     sed -re 's@Icon=libreoffice(dev)?[0-9.]*-?@Icon=@' -i "$out/share/applications/"*.desktop
 
+    qtWrapperArgs+=(--prefix GST_PLUGIN_SYSTEM_PATH : "$GST_PLUGIN_SYSTEM_PATH")
+
     mkdir -p $dev
     cp -r include $dev
   '';
@@ -335,11 +368,15 @@ in (stdenv.mkDerivation rec {
     "--without-system-libstaroffice"
     "--without-system-libepubgen"
     "--without-system-libqxp"
-    "--without-system-mdds"
+    "--without-system-mdds" # we have mdds but our version is too new
     # https://github.com/NixOS/nixpkgs/commit/5c5362427a3fa9aefccfca9e531492a8735d4e6f
     "--without-system-orcus"
     "--without-system-qrcodegen"
     "--without-system-xmlsec"
+  ] ++ lib.optionals kdeIntegration [
+    "--enable-kf5"
+    "--enable-qt5"
+    "--enable-gtk3-kde5"
   ];
 
   checkPhase = ''
@@ -347,17 +384,19 @@ in (stdenv.mkDerivation rec {
     make slowcheck
   '';
 
-  nativeBuildInputs = [ wrapGAppsHook gdb fontforge autoconf automake bison pkgconfig libtool ];
+  nativeBuildInputs = [
+    gdb fontforge autoconf automake bison pkgconfig libtool
+  ] ++ lib.optional (!kdeIntegration) wrapGAppsHook;
 
   buildInputs = with xorg;
     [ ant ArchiveZip boost cairo clucene_core
       IOCompress cppunit cups curl db dbus-glib expat file flex fontconfig
-      freetype getopt gperf gtk3 gtk2
+      freetype getopt gperf gtk3
       hunspell icu jdk lcms libcdr libexttextcat unixODBC libjpeg
       libmspack librdf_redland librsvg libsndfile libvisio libwpd libwpg libX11
       libXaw libXext libXi libXinerama libxml2 libxslt libXtst
-      libXdmcp libpthreadstubs libGLU libGL mythes gst_all_1.gstreamer
-      gst_all_1.gst-plugins-base glib libmysqlclient
+      libXdmcp libpthreadstubs libGLU libGL mythes
+      glib libmysqlclient
       neon nspr nss openldap openssl pam perl pkgconfig poppler
       python3 sane-backends unzip vigra which zip zlib
       mdds bluez5 libcmis libwps libabw libzmf
@@ -365,7 +404,8 @@ in (stdenv.mkDerivation rec {
       librevenge libe-book libmwaw glm glew ncurses epoxy
       libodfgen CoinMP librdf_rasqal gnome3.adwaita-icon-theme gettext
     ]
-    ++ lib.optional kdeIntegration kdelibs4;
+    ++ (with gst_all_1; [ gstreamer gst-plugins-base gst-plugins-good ])
+    ++ lib.optional kdeIntegration [ qtbase qtx11extras kcoreaddons kio ];
 
   passthru = {
     inherit srcs jdk;
diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix
index 3e84f95243ed..154c337d7c55 100644
--- a/pkgs/top-level/all-packages.nix
+++ b/pkgs/top-level/all-packages.nix
@@ -20563,6 +20563,14 @@ in
     };
   };
 
+  libreoffice-qt = lowPrio (callPackage ../applications/office/libreoffice/wrapper.nix {
+    libreoffice = libsForQt5.callPackage ../applications/office/libreoffice
+      (libreoffice-args // {
+        kdeIntegration = true;
+        variant = "fresh";
+      });
+  });
+
   libreoffice-fresh = lowPrio (callPackage ../applications/office/libreoffice/wrapper.nix {
     libreoffice = callPackage ../applications/office/libreoffice
       (libreoffice-args // {

From d3009e1ff337308671010a3b6b63e79e72ffce53 Mon Sep 17 00:00:00 2001
From: Pascal Winkelmann <pascal@wnklmnn.de>
Date: Wed, 3 Jun 2020 10:26:45 +0200
Subject: [PATCH 21/91] keepass: Fix Keepass plugin loading.

---
 pkgs/applications/misc/keepass/keepass-plugins-load.patch | 2 +-
 pkgs/applications/misc/keepass/keepass-plugins.patch      | 2 +-
 2 files changed, 2 insertions(+), 2 deletions(-)

diff --git a/pkgs/applications/misc/keepass/keepass-plugins-load.patch b/pkgs/applications/misc/keepass/keepass-plugins-load.patch
index ca52e7ef191a..e6a6bff8dad3 100644
--- a/pkgs/applications/misc/keepass/keepass-plugins-load.patch
+++ b/pkgs/applications/misc/keepass/keepass-plugins-load.patch
@@ -1 +1 @@
-+			m_pluginManager.LoadAllPlugins("$PATH$/lib/dotnet/keepass", SearchOption.TopDirectoryOnly, new string[] {});
++			m_pluginManager.LoadAllPlugins("$PATH$/lib/dotnet/keepass", System.IO.SearchOption.TopDirectoryOnly, new string[] {});
diff --git a/pkgs/applications/misc/keepass/keepass-plugins.patch b/pkgs/applications/misc/keepass/keepass-plugins.patch
index 9a7e3fe99832..891be1ffa314 100644
--- a/pkgs/applications/misc/keepass/keepass-plugins.patch
+++ b/pkgs/applications/misc/keepass/keepass-plugins.patch
@@ -11,7 +11,7 @@ diff --git a/KeePass/Forms/MainForm.cs b/KeePass/Forms/MainForm.cs
 index 347eaf5..b92e1e2 100644
 --- a/KeePass/Forms/MainForm.cs
 +++ b/KeePass/Forms/MainForm.cs
-@@ -440,7 +440,7 @@ namespace KeePass.Forms
+@@ -440,7 +440,$OUTPUT_LC$ @@ namespace KeePass.Forms
  				ToolStripItemCollection tsicT = m_ctxTray.Items;
  				ToolStripItem tsiPrevT = m_ctxTrayOptions;
  

From 6842a7e725fa9c7fb638dd10f2ff4e3b8b6546c2 Mon Sep 17 00:00:00 2001
From: Pascal Winkelmann <pascal@wnklmnn.de>
Date: Wed, 3 Jun 2020 10:27:46 +0200
Subject: [PATCH 22/91] keepass: pbpaste and pbcopy do not need to be replaced.
 Those are command builtin to MacOS

---
 pkgs/applications/misc/keepass/fix-paths.patch | 18 ------------------
 1 file changed, 18 deletions(-)

diff --git a/pkgs/applications/misc/keepass/fix-paths.patch b/pkgs/applications/misc/keepass/fix-paths.patch
index 0a99f506b94b..5ff36a21c002 100644
--- a/pkgs/applications/misc/keepass/fix-paths.patch
+++ b/pkgs/applications/misc/keepass/fix-paths.patch
@@ -56,24 +56,6 @@ diff --git a/KeePass/Util/ClipboardUtil.Unix.cs b/KeePass/Util/ClipboardUtil.Uni
 index ab49ee2..7f6c50f 100644
 --- a/KeePass/Util/ClipboardUtil.Unix.cs
 +++ b/KeePass/Util/ClipboardUtil.Unix.cs
-@@ -42,7 +42,7 @@ namespace KeePass.Util
- 			// string strGtk = GtkGetString();
- 			// if(strGtk != null) return strGtk;
- 
--			return (NativeLib.RunConsoleApp("pbpaste", "-pboard general") ??
-+			return (NativeLib.RunConsoleApp("@pbpaste@", "-pboard general") ??
- 				string.Empty);
- 		}
- 
-@@ -50,7 +50,7 @@ namespace KeePass.Util
- 		{
- 			// if(GtkSetString(str)) return;
- 
--			NativeLib.RunConsoleApp("pbcopy", "-pboard general", str);
-+			NativeLib.RunConsoleApp("@pbcopy@", "-pboard general", str);
- 		}
- 
- 		private static string GetStringU()
 @@ -62,7 +62,7 @@ namespace KeePass.Util
  			//	"-out -selection clipboard");
  			// if(str != null) return str;

From 7f6442739d105ca927e463b768568650516006cb Mon Sep 17 00:00:00 2001
From: Pascal Winkelmann <pascal@wnklmnn.de>
Date: Wed, 3 Jun 2020 10:29:04 +0200
Subject: [PATCH 23/91] keepass-keeagent: 0.10.1 -> 0.12.0

---
 pkgs/applications/misc/keepass-plugins/keeagent/default.nix | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/pkgs/applications/misc/keepass-plugins/keeagent/default.nix b/pkgs/applications/misc/keepass-plugins/keeagent/default.nix
index c3d260774435..85749af0a561 100644
--- a/pkgs/applications/misc/keepass-plugins/keeagent/default.nix
+++ b/pkgs/applications/misc/keepass-plugins/keeagent/default.nix
@@ -1,14 +1,14 @@
 { stdenv, buildEnv, fetchzip, mono }:
 
 let
-  version = "0.10.1";
+  version = "0.12.0";
   drv = stdenv.mkDerivation {
     pname = "keeagent";
     inherit version;
 
     src = fetchzip {
-      url = "https://lechnology.com/wp-content/uploads/2018/04/KeeAgent_v0.10.1.zip";
-      sha256 = "0j7az6l9wcr8z66mfplkxwydd4bgz2p2vd69xncf0nxlfb0lshh7";
+      url = "https://lechnology.com/wp-content/uploads/2020/05/KeeAgent_v0.12.0.zip";
+      sha256 = "0fcfbj3yikiv3dmp69236h9r3c416amdq849kn131w1129gb68xd";
       stripRoot = false;
     };
 

From 04094d7d98876336fb2480b7fc08eaa5219fc00b Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Jos=C3=A9=20Romildo=20Malaquias?= <malaquias@gmail.com>
Date: Tue, 2 Jun 2020 08:52:50 -0300
Subject: [PATCH 24/91] mint-x-icons: init at 1.5.5

---
 pkgs/data/icons/mint-x-icons/default.nix | 52 ++++++++++++++++++++++++
 pkgs/top-level/all-packages.nix          |  2 +
 2 files changed, 54 insertions(+)
 create mode 100644 pkgs/data/icons/mint-x-icons/default.nix

diff --git a/pkgs/data/icons/mint-x-icons/default.nix b/pkgs/data/icons/mint-x-icons/default.nix
new file mode 100644
index 000000000000..213ba877dc66
--- /dev/null
+++ b/pkgs/data/icons/mint-x-icons/default.nix
@@ -0,0 +1,52 @@
+{ stdenv
+, fetchurl
+, gnome-icon-theme
+, gtk3
+, hicolor-icon-theme
+, humanity-icon-theme
+, ubuntu-themes
+}:
+
+stdenv.mkDerivation rec {
+  pname = "mint-x-icons";
+  version = "1.5.5";
+
+  src = fetchurl {
+    url = "http://packages.linuxmint.com/pool/main/m/${pname}/${pname}_${version}.tar.xz";
+    sha256 = "0nq3si06m98b71f33wism0bvlvib57rm96msf0wx852ginw3a5yd";
+  };
+
+  nativeBuildInputs = [
+    gtk3
+  ];
+
+  propagatedBuildInputs = [
+    gnome-icon-theme
+    hicolor-icon-theme
+    humanity-icon-theme
+    ubuntu-themes # provides the  parent icon theme: ubuntu-mono-dark
+  ];
+
+  dontDropIconThemeCache = true;
+
+  installPhase = ''
+    runHook preInstall
+
+    mkdir -p $out/share/icons
+    cp -vai usr/share/icons/* $out/share/icons
+
+    for theme in $out/share/icons/*; do
+      gtk-update-icon-cache $theme
+    done
+
+    runHook postInstall
+  '';
+
+  meta = with stdenv.lib; {
+    description = "Mint/metal theme based on mintified versions of Clearlooks Revamp, Elementary and Faenza";
+    homepage = "https://github.com/linuxmint/mint-x-icons";
+    license = licenses.gpl3Plus;
+    platforms = platforms.linux;
+    maintainers = with maintainers; [ romildo ];
+  };
+}
diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix
index c37d7359ad0d..123d3c7829ab 100644
--- a/pkgs/top-level/all-packages.nix
+++ b/pkgs/top-level/all-packages.nix
@@ -18187,6 +18187,8 @@ in
 
   medio = callPackage ../data/fonts/medio { };
 
+  mint-x-icons = callPackage ../data/icons/mint-x-icons { };
+
   mno16 = callPackage ../data/fonts/mno16 { };
 
   mnist = callPackage ../data/machine-learning/mnist { };

From 6e3b3bf117e1eddb0180c382dfa3018f12d271da Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Jos=C3=A9=20Romildo=20Malaquias?= <malaquias@gmail.com>
Date: Wed, 3 Jun 2020 12:28:34 -0300
Subject: [PATCH 25/91] lxappearance: default to Gtk3

- make Gtk3 the default
- remove lxappearance-gtk3
- add lxappearance-gtk2
---
 pkgs/desktops/lxde/core/lxappearance/default.nix | 2 +-
 pkgs/top-level/aliases.nix                       | 1 +
 pkgs/top-level/all-packages.nix                  | 9 ++++-----
 3 files changed, 6 insertions(+), 6 deletions(-)

diff --git a/pkgs/desktops/lxde/core/lxappearance/default.nix b/pkgs/desktops/lxde/core/lxappearance/default.nix
index ea64b75214f6..edadb4f08fa0 100644
--- a/pkgs/desktops/lxde/core/lxappearance/default.nix
+++ b/pkgs/desktops/lxde/core/lxappearance/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, fetchurl, intltool, pkgconfig, libX11, gtk2, withGtk3 ? false, gtk3 }:
+{ stdenv, fetchurl, intltool, pkgconfig, libX11, gtk2, withGtk3 ? true, gtk3 }:
 
 stdenv.mkDerivation rec {
   name = "lxappearance-0.6.3";
diff --git a/pkgs/top-level/aliases.nix b/pkgs/top-level/aliases.nix
index ff4051310745..cd5ff4b789b2 100644
--- a/pkgs/top-level/aliases.nix
+++ b/pkgs/top-level/aliases.nix
@@ -275,6 +275,7 @@ mapAliases ({
   lua5_1_sockets = lua51Packages.luasocket; # added 2017-05-02
   lua5_expat = luaPackages.luaexpat; # added 2017-05-02
   lua5_sec = luaPackages.luasec; # added 2017-05-02
+  lxappearance-gtk3 = throw "lxappearance-gtk3 has been removed. Use lxappearance instead, which now defaults to Gtk3";  # added 2020-06-03
   m3d-linux = m33-linux; # added 2016-08-13
   man_db = man-db; # added 2016-05
   manpages = man-pages; # added 2015-12-06
diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix
index c37d7359ad0d..6394a3bc2182 100644
--- a/pkgs/top-level/all-packages.nix
+++ b/pkgs/top-level/all-packages.nix
@@ -9536,12 +9536,11 @@ in
     nodejs = nodejs-13_x;
   };
 
-  lxappearance = callPackage ../desktops/lxde/core/lxappearance {
-    gtk2 = gtk2-x11;
-  };
+  lxappearance = callPackage ../desktops/lxde/core/lxappearance { };
 
-  lxappearance-gtk3 = lxappearance.override {
-    withGtk3 = true;
+  lxappearance-gtk2 = callPackage ../desktops/lxde/core/lxappearance {
+    gtk2 = gtk2-x11;
+    withGtk3 = false;
   };
 
   lxmenu-data = callPackage ../desktops/lxde/core/lxmenu-data.nix { };

From 7f87a17040288281a4cb5181276a00993f9375fd Mon Sep 17 00:00:00 2001
From: taku0 <mxxouy6x3m_github@tatapa.org>
Date: Thu, 4 Jun 2020 09:12:36 +0900
Subject: [PATCH 26/91] thunderbird-bin: 68.8.1 -> 68.9.0

---
 .../thunderbird-bin/release_sources.nix       | 490 +++++++++---------
 1 file changed, 245 insertions(+), 245 deletions(-)

diff --git a/pkgs/applications/networking/mailreaders/thunderbird-bin/release_sources.nix b/pkgs/applications/networking/mailreaders/thunderbird-bin/release_sources.nix
index c7c5dab282ee..1f14ee3ae404 100644
--- a/pkgs/applications/networking/mailreaders/thunderbird-bin/release_sources.nix
+++ b/pkgs/applications/networking/mailreaders/thunderbird-bin/release_sources.nix
@@ -1,615 +1,615 @@
 {
-  version = "68.8.1";
+  version = "68.9.0";
   sources = [
-    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.8.1/linux-x86_64/ar/thunderbird-68.8.1.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.9.0/linux-x86_64/ar/thunderbird-68.9.0.tar.bz2";
       locale = "ar";
       arch = "linux-x86_64";
-      sha512 = "0f604cf3e5efff225cc544b3f289056be05ec430cf1481162f3ab1a84234660802c2777de1552f2900ca9cbf43ff13a468d3c97a44896ea02189471676243d22";
+      sha512 = "7e0a07631f2130d2876e020f7f28817cbca343e0666abd156d8f5c48a7f4bb0f4775f6366deeffdcd0676172e3b75c48c02635d018a5f1050f635f334834908d";
     }
-    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.8.1/linux-x86_64/ast/thunderbird-68.8.1.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.9.0/linux-x86_64/ast/thunderbird-68.9.0.tar.bz2";
       locale = "ast";
       arch = "linux-x86_64";
-      sha512 = "4c5a5dfdc6d81577df445cee8e4f875c95394f87037feffd47fa22bf4e153fc260f48676e8ff005d3248c31aa346b6756ba9468ae95e542e5814c5a98cfcf7e3";
+      sha512 = "47ef45548aeb20dc8dbd4f35bf12913b642986cf6071f060611696da99da30a2b10c9c8aaff8974f4fc02403026146b516e84f8f2244932f290202ef2aa59853";
     }
-    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.8.1/linux-x86_64/be/thunderbird-68.8.1.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.9.0/linux-x86_64/be/thunderbird-68.9.0.tar.bz2";
       locale = "be";
       arch = "linux-x86_64";
-      sha512 = "fca5948534a7de3c8a6dafab22e45478b79c20d1722d58fc3f423e3c792d754bcf63993b9a8c1f1c6758ea1585dd700b1ce7631a21274b0f8a05e631992ae5ed";
+      sha512 = "c704c3e4be866d70c098b07bacdd4a1020ec109e92eb85c9c04d20d90db668a36bfef711acbe8bacb897543e3b8d499d35e54875bbe10fb3fc5436f8759828c3";
     }
-    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.8.1/linux-x86_64/bg/thunderbird-68.8.1.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.9.0/linux-x86_64/bg/thunderbird-68.9.0.tar.bz2";
       locale = "bg";
       arch = "linux-x86_64";
-      sha512 = "907d252bdc8cf65b8d42ca5ee95cd7f43efe48f44d822558139ee04cee2b628966e11599f1d6db0ef5cff33a8ae424d514dc1df4e049a36432647dd3fa1039bf";
+      sha512 = "ac31e7ceb3042c2f2ac4c833687a9a44b6ec593b2d50da2edf9f11fa9bba378dea192cd472470cb7cdb2a0b708b84de688f2988f6161447cf00e5a13fe6cdd9f";
     }
-    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.8.1/linux-x86_64/br/thunderbird-68.8.1.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.9.0/linux-x86_64/br/thunderbird-68.9.0.tar.bz2";
       locale = "br";
       arch = "linux-x86_64";
-      sha512 = "ca82cbb9f61c6ee285a7b075c79aaf4ae09a86b009ea004818fffb7abd8a12708943e5f2edeb89362f7841ed5f6b9099c9e15f6a7efb2dc261a1e63e569d83c9";
+      sha512 = "1c3342c2cca3061d07be17f57d967b1e9e478f5ff91cac1df1dbc901e102e2fbeb68375af20ccc0b6922364c62fcc44a6d7715aee43fef0b2165ac091427708c";
     }
-    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.8.1/linux-x86_64/ca/thunderbird-68.8.1.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.9.0/linux-x86_64/ca/thunderbird-68.9.0.tar.bz2";
       locale = "ca";
       arch = "linux-x86_64";
-      sha512 = "3cc29b0a077b48ea0ab0d3cde6fb9cf6fe6cdcb1ea914be6ed6d38e1bf382f910fad7920e918d2c9c9131845bb24b2818cfc45349270ff636e8bc216fd2b3059";
+      sha512 = "2a0bca4b9fe58bb7872265384151ae7d2ed87122a9372ffd52752a11bec29b24a8d28f0e3102c0d6f84e545ccc6004fdace3bba7d68de206a3be5c72962c1a9e";
     }
-    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.8.1/linux-x86_64/cak/thunderbird-68.8.1.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.9.0/linux-x86_64/cak/thunderbird-68.9.0.tar.bz2";
       locale = "cak";
       arch = "linux-x86_64";
-      sha512 = "184f74a10722a72ad622c54f221b62193259cdd54cd9dc4d71326219fd6dc533c723d5e926bfa0e7a3231a41864fefe578030329f0e24765ddad7459945cc75d";
+      sha512 = "ef27a17f5a44072596b753cd110ed4d24d7355649ddfae988a2d6622871421088d1502866226fc1f18bf8233478b5c00e98f10cf3f920ad6b4a7bad9c5e9cae2";
     }
-    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.8.1/linux-x86_64/cs/thunderbird-68.8.1.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.9.0/linux-x86_64/cs/thunderbird-68.9.0.tar.bz2";
       locale = "cs";
       arch = "linux-x86_64";
-      sha512 = "1f76a6f2e9a4804c697d2842389d9fe0aaf1e8b30eaaf0aaf9ccd252c64a20d10b876011ec6cf54e4d6778d03a51673f4d941d1875ba66d31946bd446006daf8";
+      sha512 = "1a68ecf3ae228078c67b296a1642578d8e5a7808707e8a7eab4cbe8191a6b19057fca8e3c4faa660d6a64732ca3a052579fa652bbe5bb30a85d577f7b702e55e";
     }
-    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.8.1/linux-x86_64/cy/thunderbird-68.8.1.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.9.0/linux-x86_64/cy/thunderbird-68.9.0.tar.bz2";
       locale = "cy";
       arch = "linux-x86_64";
-      sha512 = "28f9314997024728691ea43b4bb2eec51a8ce8a0da26025c1f6213eb2f20c140dee0c87950a325589c7af8b037f7378025dc05346a7156ee8ea200e89705ed84";
+      sha512 = "4d3cc4a57f3e210129ba47c2fc0798d852e4369a62dfefaf3b9a8fc77939431a7cc5839c667a062231ccf49e6eeedfc60c5492fdbf5eec080233b851203305f4";
     }
-    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.8.1/linux-x86_64/da/thunderbird-68.8.1.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.9.0/linux-x86_64/da/thunderbird-68.9.0.tar.bz2";
       locale = "da";
       arch = "linux-x86_64";
-      sha512 = "d65d1b71b93b08bf783a691b26d39a6749c3b0ece109889ea9342f8dce681e47d4785010548f388d943e10632e9539f9747eb4b9ec7da524d8087300961fe3df";
+      sha512 = "79e655f62bc95b65640e3556d2690725ff012a16b2cbe656223a118294915c5619563fbdef9b88fd5db3f982cea5e8ad85a9bc389776ea95ab155539d6a4c217";
     }
-    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.8.1/linux-x86_64/de/thunderbird-68.8.1.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.9.0/linux-x86_64/de/thunderbird-68.9.0.tar.bz2";
       locale = "de";
       arch = "linux-x86_64";
-      sha512 = "e140fe5153f3c2eadc5bac3891d4c2d2e03e0823da146d78c21884a28bbaa1fc1ea394c726bceaa20ffd2bfd8c1f841966de22fedd3e789b39b8dfabc2bbd930";
+      sha512 = "cad5d0c08e07f6d1247cae9737d0747875b9b35036892093230423d92530fe2de2975174dfd6ec0d2e2d7ddf86027601d37d3fce14343ad4cb89be5d68052785";
     }
-    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.8.1/linux-x86_64/dsb/thunderbird-68.8.1.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.9.0/linux-x86_64/dsb/thunderbird-68.9.0.tar.bz2";
       locale = "dsb";
       arch = "linux-x86_64";
-      sha512 = "6c17e859826e48d59777a022273540696ec9c1da026922b46f4538067e34561d3717d2e4d092eae8de9c98bdf7d06a76ddc1af7f2832cd690a466a05d0e0e317";
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       arch = "linux-i686";
-      sha512 = "3dbb3a4bcf800621f191b11ca3e05e2acb114348dbab49695478fbc653ad154a92f0aa62cd6d86216e1447728d6d3ddd01da678f4a9feb2b7964794f5609f7e5";
+      sha512 = "2d31a86952df2f5b339479cc6dabd1cbcc000119514775b07ca086e01e8310fe0d0d2c63cc57cb936588c59a5f72a5d9dae0e0a6e2f9b7cdf6225e400c24bd31";
     }
-    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.8.1/linux-i686/vi/thunderbird-68.8.1.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.9.0/linux-i686/vi/thunderbird-68.9.0.tar.bz2";
       locale = "vi";
       arch = "linux-i686";
-      sha512 = "8724cbf93d5d7ebf6fa67b85bf559bfe905cca6b76a4e386db99252d7460ce78d3b63f3c1e5a14782f72d1434906a2d7ad2497bb66ffa6cb66aaf44dc84d0a0e";
+      sha512 = "3c241242e918bb69d811289879323205c070620829e05488e224450e7edb2be32b0f2c36f3182fcab95a1673fd133635e89801feaf6a34fa1553d8fea3b57641";
     }
-    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.8.1/linux-i686/zh-CN/thunderbird-68.8.1.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.9.0/linux-i686/zh-CN/thunderbird-68.9.0.tar.bz2";
       locale = "zh-CN";
       arch = "linux-i686";
-      sha512 = "3cc8703dffdedc2de263c2ce10e2fc2f374c991ec7b34ab3d5530d3441ce8049577824cbeb0ec4ab233973e2d5c0120958360b1920e3f43ae9362132b4948cdd";
+      sha512 = "b4932b43158a5f8627ec951a3cb726863575a81b9d7b93ab35a9168224cd91480ecde55a1e7d4c01b9ed74f92440724475980010f1645db9b2ef0b6c42e92d93";
     }
-    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.8.1/linux-i686/zh-TW/thunderbird-68.8.1.tar.bz2";
+    { url = "http://archive.mozilla.org/pub/thunderbird/releases/68.9.0/linux-i686/zh-TW/thunderbird-68.9.0.tar.bz2";
       locale = "zh-TW";
       arch = "linux-i686";
-      sha512 = "bf37041bac13932ad283d49a2f4f552cd4422aaab7baec7a18e19ffd4101b155a8e864aa666eb85683a82668c393c7210631754a375d012e9c9e200c554776c3";
+      sha512 = "018fff050295932a492433992a97fd01acc36685f7d1f96bba2f41972fdd6cd592c117434d2de81d0d018595c8473427aefe5a7b66194bc18d127c2e7eab5a34";
     }
     ];
 }

From 5967e4d8f3c45e82c9774771dd75bf5966fb988d Mon Sep 17 00:00:00 2001
From: taku0 <mxxouy6x3m_github@tatapa.org>
Date: Thu, 4 Jun 2020 09:13:03 +0900
Subject: [PATCH 27/91] thunderbird: 68.8.1 -> 68.9.0

---
 .../networking/mailreaders/thunderbird/default.nix            | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/pkgs/applications/networking/mailreaders/thunderbird/default.nix b/pkgs/applications/networking/mailreaders/thunderbird/default.nix
index ee8d36b421aa..e36d99886e21 100644
--- a/pkgs/applications/networking/mailreaders/thunderbird/default.nix
+++ b/pkgs/applications/networking/mailreaders/thunderbird/default.nix
@@ -72,13 +72,13 @@ assert waylandSupport -> gtk3Support == true;
 
 stdenv.mkDerivation rec {
   pname = "thunderbird";
-  version = "68.8.1";
+  version = "68.9.0";
 
   src = fetchurl {
     url =
       "mirror://mozilla/thunderbird/releases/${version}/source/thunderbird-${version}.source.tar.xz";
     sha512 =
-      "2zq65qhrg8xsz75yywcijdjbkndn79w73v5vyahiyyibc8lfjphz0zaihk67ja82fpnxlnsfvy45s8x5l42kcbb0wibkjy7m55bd6h7";
+      "3q0dikgkfr72hhz39pxi2f0cljn09lw4940qcn9kzfwfid2h290j7pihx6gs0z6h82fl78f9fl1598d064lwl1i2434dzx6bg4p4549";
   };
 
   nativeBuildInputs = [

From 9644b56c74b782a59af3bd0fbc6cc75fb23c23be Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Jos=C3=A9=20Romildo=20Malaquias?= <malaquias@gmail.com>
Date: Wed, 3 Jun 2020 12:34:08 -0300
Subject: [PATCH 28/91] lxappearance: format with nixpkgs-fmt

Also:
- use pkg-config instead of the alias pkgconfig
- add romildo as maintainer
---
 .../lxde/core/lxappearance/default.nix        | 36 +++++++++++++------
 1 file changed, 26 insertions(+), 10 deletions(-)

diff --git a/pkgs/desktops/lxde/core/lxappearance/default.nix b/pkgs/desktops/lxde/core/lxappearance/default.nix
index edadb4f08fa0..b838c19afc8e 100644
--- a/pkgs/desktops/lxde/core/lxappearance/default.nix
+++ b/pkgs/desktops/lxde/core/lxappearance/default.nix
@@ -1,26 +1,42 @@
-{ stdenv, fetchurl, intltool, pkgconfig, libX11, gtk2, withGtk3 ? true, gtk3 }:
+{ stdenv
+, fetchurl
+, intltool
+, pkg-config
+, libX11
+, gtk2
+, gtk3
+, withGtk3 ? true
+}:
 
 stdenv.mkDerivation rec {
   name = "lxappearance-0.6.3";
 
-  src = fetchurl{
+  src = fetchurl {
     url = "mirror://sourceforge/project/lxde/LXAppearance/${name}.tar.xz";
     sha256 = "0f4bjaamfxxdr9civvy55pa6vv9dx1hjs522gjbbgx7yp1cdh8kj";
   };
 
-  nativeBuildInputs = [ pkgconfig intltool ];
+  nativeBuildInputs = [
+    pkg-config
+    intltool
+  ];
 
-  buildInputs = [ libX11 (if withGtk3 then gtk3 else gtk2) ];
+  buildInputs = [
+    libX11
+    (if withGtk3 then gtk3 else gtk2)
+  ];
 
-  patches = [ ./lxappearance-0.6.3-xdg.system.data.dirs.patch ];
+  patches = [
+    ./lxappearance-0.6.3-xdg.system.data.dirs.patch
+  ];
 
   configureFlags = stdenv.lib.optional withGtk3 "--enable-gtk3";
 
-  meta = {
-    description = "A lightweight program for configuring the theme and fonts of gtk applications";
+  meta = with stdenv.lib; {
+    description = "Lightweight program for configuring the theme and fonts of gtk applications";
     homepage = "https://lxde.org/";
-    maintainers = [ stdenv.lib.maintainers.hinton ];
-    platforms = stdenv.lib.platforms.linux;
-    license = stdenv.lib.licenses.gpl2;
+    license = licenses.gpl2;
+    platforms = platforms.linux;
+    maintainers = with maintainers; [ hinton romildo ];
   };
 }

From 2d38b58262e6cdc5317e8e2d10fc10acce36b12e Mon Sep 17 00:00:00 2001
From: Mario Rodas <marsam@users.noreply.github.com>
Date: Thu, 4 Jun 2020 02:40:00 -0500
Subject: [PATCH 29/91] watchexec: 1.12.0 -> 1.13.0

Changelog: https://github.com/watchexec/watchexec/releases/tag/1.13.0
---
 pkgs/tools/misc/watchexec/default.nix | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/pkgs/tools/misc/watchexec/default.nix b/pkgs/tools/misc/watchexec/default.nix
index 1c626785483c..a737728784be 100644
--- a/pkgs/tools/misc/watchexec/default.nix
+++ b/pkgs/tools/misc/watchexec/default.nix
@@ -2,16 +2,16 @@
 
 rustPlatform.buildRustPackage rec {
   pname = "watchexec";
-  version = "1.12.0";
+  version = "1.13.0";
 
   src = fetchFromGitHub {
     owner = pname;
     repo = pname;
     rev = version;
-    sha256 = "03s9nsss4895x4lp90y65jajavk8c2nj1jjnmx0vbbwl210ghlv1";
+    sha256 = "0b6ichf528v9mca67301ncm808mzbdi212j0b8zz72aw8dff6ph2";
   };
 
-  cargoSha256 = "0p20d7paiafvl4k9iiazbgq75wk7k42sz2h1y5lalq16f5rp6dbp";
+  cargoSha256 = "13812swawp65f4j0c0q9x5bs9s3qancw0q2awasry0pcyh7nrxrj";
 
   nativeBuildInputs = [ installShellFiles ];
 

From 8f9e4bef4c95f057b09cf5914933834c2277dc60 Mon Sep 17 00:00:00 2001
From: Eelco Dolstra <edolstra@gmail.com>
Date: Thu, 4 Jun 2020 13:43:10 +0200
Subject: [PATCH 30/91] Bump minver.nix to 2.2

Note: NixOS 19.03 had Nix 2.2 and 19.09 had 2.3.
---
 lib/minver.nix | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/lib/minver.nix b/lib/minver.nix
index fee6b65a2447..86391bcd69e0 100644
--- a/lib/minver.nix
+++ b/lib/minver.nix
@@ -1,2 +1,2 @@
 # Expose the minimum required version for evaluating Nixpkgs
-"2.0"
+"2.2"

From bbfc47326b393daf26c7227bfa2cfc235e812251 Mon Sep 17 00:00:00 2001
From: Eelco Dolstra <edolstra@gmail.com>
Date: Thu, 4 Jun 2020 14:18:18 +0200
Subject: [PATCH 31/91] Don't enable nix-bash-completions when using Nix 2.4

2.4 has its own completion script which collides with
nix-bash-completions.
---
 nixos/modules/config/system-path.nix       | 4 +---
 nixos/modules/programs/bash/bash.nix       | 3 ---
 nixos/modules/services/misc/nix-daemon.nix | 6 ++++++
 3 files changed, 7 insertions(+), 6 deletions(-)

diff --git a/nixos/modules/config/system-path.nix b/nixos/modules/config/system-path.nix
index 4100ec897016..cba357171d72 100644
--- a/nixos/modules/config/system-path.nix
+++ b/nixos/modules/config/system-path.nix
@@ -8,8 +8,7 @@ with lib;
 let
 
   requiredPackages = map (pkg: setPrio ((pkg.meta.priority or 5) + 3) pkg)
-    [ config.nix.package
-      pkgs.acl
+    [ pkgs.acl
       pkgs.attr
       pkgs.bashInteractive # bash with ncurses support
       pkgs.bzip2
@@ -33,7 +32,6 @@ let
       pkgs.nano
       pkgs.ncurses
       pkgs.netcat
-      pkgs.nix-info
       config.programs.ssh.package
       pkgs.perl
       pkgs.procps
diff --git a/nixos/modules/programs/bash/bash.nix b/nixos/modules/programs/bash/bash.nix
index be964ce7f3f9..1b3254b54a59 100644
--- a/nixos/modules/programs/bash/bash.nix
+++ b/nixos/modules/programs/bash/bash.nix
@@ -238,9 +238,6 @@ in
       "/share/bash-completion"
     ];
 
-    environment.systemPackages = optional cfg.enableCompletion
-      pkgs.nix-bash-completions;
-
     environment.shells =
       [ "/run/current-system/sw/bin/bash"
         "/run/current-system/sw/bin/sh"
diff --git a/nixos/modules/services/misc/nix-daemon.nix b/nixos/modules/services/misc/nix-daemon.nix
index 2577cb78e96e..0b3d7f3f03c3 100644
--- a/nixos/modules/services/misc/nix-daemon.nix
+++ b/nixos/modules/services/misc/nix-daemon.nix
@@ -442,6 +442,12 @@ in
     nix.binaryCachePublicKeys = [ "cache.nixos.org-1:6NCHdD59X431o0gWypbMrAURkbJ16ZPMQFGspcDShjY=" ];
     nix.binaryCaches = [ "https://cache.nixos.org/" ];
 
+    environment.systemPackages =
+      [ nix
+        pkgs.nix-info
+      ]
+      ++ optional (config.programs.bash.enableCompletion && !versionAtLeast nixVersion "2.4pre") pkgs.nix-bash-completions;
+
     environment.etc."nix/nix.conf".source = nixConf;
 
     environment.etc."nix/registry.json".text = builtins.toJSON {

From 79454f15acfc05d57d4a8d0cd01384fc103db596 Mon Sep 17 00:00:00 2001
From: Robin Gloster <mail@glob.in>
Date: Sun, 31 May 2020 06:21:09 +0200
Subject: [PATCH 32/91] gitlab: 12.10.8 -> 13.0.3

https://about.gitlab.com/releases/2020/05/22/gitlab-13-0-released/
https://about.gitlab.com/releases/2020/05/27/security-release-13-0-1-released/
https://about.gitlab.com/releases/2020/05/29/gitlab-13-0-3-released/

The gitaly gitlab-shell config has moved into gitaly.toml. See
https://gitlab.com/gitlab-org/gitaly/-/issues/2182 for more info.
---
 nixos/modules/services/misc/gitlab.nix        |   3 +
 .../version-management/gitlab/data.json       |  14 +-
 .../version-management/gitlab/gitaly/Gemfile  |  16 +-
 .../gitlab/gitaly/Gemfile.lock                |  58 +--
 .../gitlab/gitaly/default.nix                 |  11 +-
 .../version-management/gitlab/gitaly/deps.nix | 366 ++++++++++++++----
 .../gitlab/gitaly/gemset.nix                  |  70 ++--
 .../gitlab/gitlab-shell/default.nix           |   4 +-
 .../gitlab/gitlab-workhorse/default.nix       |   4 +-
 .../gitlab/gitlab-workhorse/deps.nix          |   9 +
 .../version-management/gitlab/rubyEnv/Gemfile |  45 ++-
 .../gitlab/rubyEnv/Gemfile.lock               | 193 +++++----
 .../gitlab/rubyEnv/gemset.nix                 | 189 ++++-----
 .../version-management/gitlab/yarnPkgs.nix    | 280 ++++++++------
 14 files changed, 781 insertions(+), 481 deletions(-)

diff --git a/nixos/modules/services/misc/gitlab.nix b/nixos/modules/services/misc/gitlab.nix
index 7b2bbf89a446..1ada131bd7ba 100644
--- a/nixos/modules/services/misc/gitlab.nix
+++ b/nixos/modules/services/misc/gitlab.nix
@@ -43,6 +43,9 @@ let
 
     [gitlab-shell]
     dir = "${cfg.packages.gitlab-shell}"
+    secret_file = "${cfg.statePath}/gitlab_shell_secret"
+    gitlab_url = "http+unix://${pathUrlQuote gitlabSocket}"
+    http_settings = { self_signed_cert = false }
 
     ${concatStringsSep "\n" (attrValues (mapAttrs (k: v: ''
     [[storage]]
diff --git a/pkgs/applications/version-management/gitlab/data.json b/pkgs/applications/version-management/gitlab/data.json
index a53b52c70469..7e753a5c19db 100644
--- a/pkgs/applications/version-management/gitlab/data.json
+++ b/pkgs/applications/version-management/gitlab/data.json
@@ -1,13 +1,13 @@
 {
-  "version": "12.10.8",
-  "repo_hash": "189l6l47s5lz0y2qjbai1n9l6yq513d38apyv88c3by3r41m86y1",
+  "version": "13.0.3",
+  "repo_hash": "1jgyk8fxcizxggjy7nfyysjbx9bc0fhq3ayzb06gbhwfd0h48435",
   "owner": "gitlab-org",
   "repo": "gitlab",
-  "rev": "v12.10.8-ee",
+  "rev": "v13.0.3-ee",
   "passthru": {
-    "GITALY_SERVER_VERSION": "12.10.8",
-    "GITLAB_PAGES_VERSION": "1.17.0",
-    "GITLAB_SHELL_VERSION": "12.2.0",
-    "GITLAB_WORKHORSE_VERSION": "8.30.2"
+    "GITALY_SERVER_VERSION": "13.0.3",
+    "GITLAB_PAGES_VERSION": "1.18.0",
+    "GITLAB_SHELL_VERSION": "13.2.0",
+    "GITLAB_WORKHORSE_VERSION": "8.31.1"
   }
 }
\ No newline at end of file
diff --git a/pkgs/applications/version-management/gitlab/gitaly/Gemfile b/pkgs/applications/version-management/gitlab/gitaly/Gemfile
index 1d50ea07ce91..8a35c8c3b475 100644
--- a/pkgs/applications/version-management/gitlab/gitaly/Gemfile
+++ b/pkgs/applications/version-management/gitlab/gitaly/Gemfile
@@ -4,25 +4,25 @@ source 'https://rubygems.org'
 gem 'bundler', '>= 1.17.3'
 
 gem 'rugged', '~> 0.28'
-gem 'github-linguist', '~> 7.5', require: 'linguist'
-gem 'gitlab-markup', '~> 1.7.0'
-gem 'activesupport', '6.0.2'
+gem 'github-linguist', '~> 7.9', require: 'linguist'
+gem 'gitlab-markup', '~> 1.7.1'
+gem 'activesupport', '~> 6.0.3.1'
 gem 'rdoc', '~> 6.0'
-gem 'gitlab-gollum-lib', '~> 4.2.7.8', require: false
+gem 'gitlab-gollum-lib', '~> 4.2.7.9', require: false
 gem 'gitlab-gollum-rugged_adapter', '~> 0.4.4.2', require: false
-gem 'grpc', '~> 1.27.0'
+gem 'grpc', '~> 1.24.0'
 gem 'sentry-raven', '~> 2.9.0', require: false
 gem 'faraday', '~> 0.12'
 gem 'rbtrace', require: false
 
 # Labkit provides observability functionality
-gem 'gitlab-labkit', '~> 0.9.1'
+gem 'gitlab-labkit', '~> 0.12.0'
 
 # Detects the open source license the repository includes
 # This version needs to be in sync with GitLab CE/EE
 gem 'licensee', '~> 8.9.0'
 
-gem 'google-protobuf', '~> 3.11.2'
+gem 'google-protobuf', '~> 3.8.0'
 
 group :development, :test do
   gem 'rubocop', '~> 0.69', require: false
@@ -32,6 +32,8 @@ group :development, :test do
   gem 'factory_bot', require: false
   gem 'pry', '~> 0.12.2', require: false
 
+  gem 'grpc-tools', '= 1.0.1'
+
   # gitlab-shell spec gems
   gem 'listen', '~> 0.5.0'
   gem 'simplecov', '~> 0.17.1', require: false
diff --git a/pkgs/applications/version-management/gitlab/gitaly/Gemfile.lock b/pkgs/applications/version-management/gitlab/gitaly/Gemfile.lock
index 804f643afa8f..f409ebb9b414 100644
--- a/pkgs/applications/version-management/gitlab/gitaly/Gemfile.lock
+++ b/pkgs/applications/version-management/gitlab/gitaly/Gemfile.lock
@@ -2,25 +2,25 @@ GEM
   remote: https://rubygems.org/
   specs:
     abstract_type (0.0.7)
-    actionpack (6.0.2)
-      actionview (= 6.0.2)
-      activesupport (= 6.0.2)
-      rack (~> 2.0)
+    actionpack (6.0.3.1)
+      actionview (= 6.0.3.1)
+      activesupport (= 6.0.3.1)
+      rack (~> 2.0, >= 2.0.8)
       rack-test (>= 0.6.3)
       rails-dom-testing (~> 2.0)
       rails-html-sanitizer (~> 1.0, >= 1.2.0)
-    actionview (6.0.2)
-      activesupport (= 6.0.2)
+    actionview (6.0.3.1)
+      activesupport (= 6.0.3.1)
       builder (~> 3.1)
       erubi (~> 1.4)
       rails-dom-testing (~> 2.0)
       rails-html-sanitizer (~> 1.1, >= 1.2.0)
-    activesupport (6.0.2)
+    activesupport (6.0.3.1)
       concurrent-ruby (~> 1.0, >= 1.0.2)
       i18n (>= 0.7, < 2)
       minitest (~> 5.1)
       tzinfo (~> 1.1)
-      zeitwerk (~> 2.2)
+      zeitwerk (~> 2.2, >= 2.2.2)
     adamantium (0.2.0)
       ice_nine (~> 0.11.0)
       memoizable (~> 0.4.0)
@@ -34,7 +34,7 @@ GEM
     concord (0.1.5)
       adamantium (~> 0.2.0)
       equalizer (~> 0.0.9)
-    concurrent-ruby (1.1.5)
+    concurrent-ruby (1.1.6)
     crack (0.4.3)
       safe_yaml (~> 1.0.0)
     crass (1.0.6)
@@ -47,16 +47,16 @@ GEM
       activesupport (>= 4.2.0)
     faraday (0.15.4)
       multipart-post (>= 1.2, < 3)
-    ffi (1.11.1)
+    ffi (1.12.2)
     gemojione (3.3.0)
       json
-    github-linguist (7.5.1)
+    github-linguist (7.9.0)
       charlock_holmes (~> 0.7.6)
       escape_utils (~> 1.2.0)
       mini_mime (~> 1.0)
       rugged (>= 0.25.1)
     github-markup (1.7.0)
-    gitlab-gollum-lib (4.2.7.8)
+    gitlab-gollum-lib (4.2.7.9)
       gemojione (~> 3.2)
       github-markup (~> 1.6)
       gitlab-gollum-rugged_adapter (~> 0.4.4.2)
@@ -67,20 +67,21 @@ GEM
     gitlab-gollum-rugged_adapter (0.4.4.2)
       mime-types (>= 1.15)
       rugged (~> 0.25)
-    gitlab-labkit (0.9.1)
+    gitlab-labkit (0.12.0)
       actionpack (>= 5.0.0, < 6.1.0)
       activesupport (>= 5.0.0, < 6.1.0)
       grpc (~> 1.19)
       jaeger-client (~> 0.10)
       opentracing (~> 0.4)
       redis (> 3.0.0, < 5.0.0)
-    gitlab-markup (1.7.0)
-    google-protobuf (3.11.4)
+    gitlab-markup (1.7.1)
+    google-protobuf (3.8.0)
     googleapis-common-protos-types (1.0.4)
       google-protobuf (~> 3.0)
-    grpc (1.27.0)
-      google-protobuf (~> 3.11)
+    grpc (1.24.0)
+      google-protobuf (~> 3.8)
       googleapis-common-protos-types (~> 1.0)
+    grpc-tools (1.0.1)
     hashdiff (0.3.9)
     i18n (1.8.2)
       concurrent-ruby (~> 1.0)
@@ -93,7 +94,7 @@ GEM
     licensee (8.9.2)
       rugged (~> 0.24)
     listen (0.5.3)
-    loofah (2.4.0)
+    loofah (2.5.0)
       crass (~> 1.0.2)
       nokogiri (>= 1.5.9)
     memoizable (0.4.2)
@@ -140,7 +141,7 @@ GEM
       optimist (>= 3.0.0)
     rdoc (6.2.0)
     redis (4.1.3)
-    rouge (3.18.0)
+    rouge (3.19.0)
     rspec (3.8.0)
       rspec-core (~> 3.8.0)
       rspec-expectations (~> 3.8.0)
@@ -185,7 +186,7 @@ GEM
     thread_safe (0.3.6)
     thrift (0.11.0.0)
     timecop (0.9.1)
-    tzinfo (1.2.6)
+    tzinfo (1.2.7)
       thread_safe (~> 0.1)
     unicode-display_width (1.6.0)
     unparser (0.4.7)
@@ -201,23 +202,24 @@ GEM
       addressable (>= 2.3.6)
       crack (>= 0.3.2)
       hashdiff
-    zeitwerk (2.2.2)
+    zeitwerk (2.3.0)
 
 PLATFORMS
   ruby
 
 DEPENDENCIES
-  activesupport (= 6.0.2)
+  activesupport (~> 6.0.3.1)
   bundler (>= 1.17.3)
   factory_bot
   faraday (~> 0.12)
-  github-linguist (~> 7.5)
-  gitlab-gollum-lib (~> 4.2.7.8)
+  github-linguist (~> 7.9)
+  gitlab-gollum-lib (~> 4.2.7.9)
   gitlab-gollum-rugged_adapter (~> 0.4.4.2)
-  gitlab-labkit (~> 0.9.1)
-  gitlab-markup (~> 1.7.0)
-  google-protobuf (~> 3.11.2)
-  grpc (~> 1.27.0)
+  gitlab-labkit (~> 0.12.0)
+  gitlab-markup (~> 1.7.1)
+  google-protobuf (~> 3.8.0)
+  grpc (~> 1.24.0)
+  grpc-tools (= 1.0.1)
   licensee (~> 8.9.0)
   listen (~> 0.5.0)
   pry (~> 0.12.2)
diff --git a/pkgs/applications/version-management/gitlab/gitaly/default.nix b/pkgs/applications/version-management/gitlab/gitaly/default.nix
index 770f4b46deb0..9c5e372b96aa 100644
--- a/pkgs/applications/version-management/gitlab/gitaly/default.nix
+++ b/pkgs/applications/version-management/gitlab/gitaly/default.nix
@@ -19,14 +19,14 @@ let
       };
   };
 in buildGoPackage rec {
-  version = "12.10.8";
+  version = "13.0.3";
   pname = "gitaly";
 
   src = fetchFromGitLab {
     owner = "gitlab-org";
     repo = "gitaly";
     rev = "v${version}";
-    sha256 = "02dih35j97q80kzi46pkf9f9r1sffw11i5zmpjs2rr96al426g8q";
+    sha256 = "0dvgi1pgn3pv7d6fkfmrp5y61inv9zgrw0224v44w00wm7sv9xi1";
   };
 
   # Fix a check which assumes that hook files are writeable by their
@@ -49,13 +49,6 @@ in buildGoPackage rec {
   postInstall = ''
     mkdir -p $ruby
     cp -rv $src/ruby/{bin,lib,proto,git-hooks,gitlab-shell} $ruby
-
-    # gitlab-shell will try to read its config relative to the source
-    # code by default which doesn't work in nixos because it's a
-    # read-only filesystem
-    substituteInPlace $ruby/gitlab-shell/lib/gitlab_config.rb --replace \
-       "ROOT_PATH.join('config.yml')" \
-       "Pathname.new('/run/gitlab/shell-config.yml')"
   '';
 
   outputs = [ "out" "ruby" ];
diff --git a/pkgs/applications/version-management/gitlab/gitaly/deps.nix b/pkgs/applications/version-management/gitlab/gitaly/deps.nix
index e23c5e08254e..221ce16163d8 100644
--- a/pkgs/applications/version-management/gitlab/gitaly/deps.nix
+++ b/pkgs/applications/version-management/gitlab/gitaly/deps.nix
@@ -1,5 +1,14 @@
 # file generated from go.mod using vgo2nix (https://github.com/adisbladis/vgo2nix)
 [
+  {
+    goPackagePath = "bou.ke/monkey";
+    fetch = {
+      type = "git";
+      url = "https://github.com/bouk/monkey";
+      rev = "v1.0.1";
+      sha256 = "050y07pwx5zk7fchp0lhf35w417sml7lxkkzly8f932fy25rydz5";
+    };
+  }
   {
     goPackagePath = "cloud.google.com/go";
     fetch = {
@@ -9,6 +18,24 @@
       sha256 = "0pbz5migljd5whxh6z1w79cwx93n85mcs3x1bckl27yzaa4lvqsl";
     };
   }
+  {
+    goPackagePath = "dmitri.shuralyov.com/gpu/mtl";
+    fetch = {
+      type = "git";
+      url = "https://dmitri.shuralyov.com/gpu/mtl";
+      rev = "666a987793e9";
+      sha256 = "1isd03hgiwcf2ld1rlp0plrnfz7r4i7c5q4kb6hkcd22axnmrv0z";
+    };
+  }
+  {
+    goPackagePath = "github.com/AndreasBriese/bbloom";
+    fetch = {
+      type = "git";
+      url = "https://github.com/AndreasBriese/bbloom";
+      rev = "e2d15f34fcf9";
+      sha256 = "05kkrsmpragy69bj6s80pxlm3pbwxrkkx7wgk0xigs6y2n6ylpds";
+    };
+  }
   {
     goPackagePath = "github.com/BurntSushi/toml";
     fetch = {
@@ -27,13 +54,22 @@
       sha256 = "18lp2x8f5bljvlz0r7xn744f0c9rywjsb9ifiszqqdcpwhsa0kvj";
     };
   }
+  {
+    goPackagePath = "github.com/CloudyKit/fastprinter";
+    fetch = {
+      type = "git";
+      url = "https://github.com/CloudyKit/fastprinter";
+      rev = "74b38d55f37a";
+      sha256 = "07wkq3503j7sd5knsgp3lwzfdwm6sj7a3l6i71i52yb3fd8md235";
+    };
+  }
   {
     goPackagePath = "github.com/Joker/hpp";
     fetch = {
       type = "git";
       url = "https://github.com/Joker/hpp";
-      rev = "6893e659854a";
-      sha256 = "0lsx63c28rzqigv3lwzznqacpk7nr0dn6ig37v023x8lzc728ix5";
+      rev = "v1.0.0";
+      sha256 = "1xnqkjkmqdj48w80qa74rwcmgar8dcilpkcrcn1f53djk45k1gq2";
     };
   }
   {
@@ -41,8 +77,8 @@
     fetch = {
       type = "git";
       url = "https://github.com/Joker/jade";
-      rev = "v1.0.0";
-      sha256 = "0k9b8dcwwhajw6rzjmakqwmhw9z192pzzdhppcvam6dy63yl4zjf";
+      rev = "d475f43051e7";
+      sha256 = "0yigzvxp5qd05pai0yimzkpl2m23358a2fqqs585psrdmwsic2pn";
     };
   }
   {
@@ -99,15 +135,6 @@
       sha256 = "0y8chspn14n9xpsfb9gxnnf819rfpriaz64v81p7873a42kkhxb4";
     };
   }
-  {
-    goPackagePath = "github.com/aymerick/raymond";
-    fetch = {
-      type = "git";
-      url = "https://github.com/aymerick/raymond";
-      rev = "v2.0.2";
-      sha256 = "1w6am4142k8lyjnwwcgx94c2d8zviflzi0a9c81gn2j0gyx475i3";
-    };
-  }
   {
     goPackagePath = "github.com/beorn7/perks";
     fetch = {
@@ -185,8 +212,8 @@
     fetch = {
       type = "git";
       url = "https://github.com/cloudflare/tableflip";
-      rev = "8392f1641731";
-      sha256 = "0by5hk8s0bhhl3kiw658p5g53zvc61k4q2wxnh1w64p5ghd1rfn8";
+      rev = "4baec9811f2b";
+      sha256 = "095xb5gfz7dglljp91nh68dnscddvlf7q5ivvz972fq86r3ypq6q";
     };
   }
   {
@@ -261,6 +288,15 @@
       sha256 = "0mr4y9vppiyl7mvad74k3zk4sc1jdkmc0lcd6lhm70iziw2xpncs";
     };
   }
+  {
+    goPackagePath = "github.com/dgraph-io/badger";
+    fetch = {
+      type = "git";
+      url = "https://github.com/dgraph-io/badger";
+      rev = "v1.6.0";
+      sha256 = "1vzibjqhb10q6s2chbzlwndij2d9ybjnq7h28hx4akr119avd0d5";
+    };
+  }
   {
     goPackagePath = "github.com/dgrijalva/jwt-go";
     fetch = {
@@ -270,6 +306,24 @@
       sha256 = "08m27vlms74pfy5z79w67f9lk9zkx6a9jd68k3c4msxy75ry36mp";
     };
   }
+  {
+    goPackagePath = "github.com/dgryski/go-farm";
+    fetch = {
+      type = "git";
+      url = "https://github.com/dgryski/go-farm";
+      rev = "6a90982ecee2";
+      sha256 = "1x3l4jgps0v1bjvd446kj4dp0ckswjckxgrng9afm275ixnf83ix";
+    };
+  }
+  {
+    goPackagePath = "github.com/dustin/go-humanize";
+    fetch = {
+      type = "git";
+      url = "https://github.com/dustin/go-humanize";
+      rev = "v1.0.0";
+      sha256 = "1kqf1kavdyvjk7f8kx62pnm7fbypn9z1vbf8v2qdh3y7z7a0cbl3";
+    };
+  }
   {
     goPackagePath = "github.com/eknkc/amber";
     fetch = {
@@ -279,6 +333,24 @@
       sha256 = "152w97yckwncgw7lwjvgd8d00wy6y0nxzlvx72kl7nqqxs9vhxd9";
     };
   }
+  {
+    goPackagePath = "github.com/etcd-io/bbolt";
+    fetch = {
+      type = "git";
+      url = "https://github.com/etcd-io/bbolt";
+      rev = "v1.3.3";
+      sha256 = "0dn0zngks9xiz0rrrb3911f73ghl64z84jsmzai2yfmzqr7cdkqc";
+    };
+  }
+  {
+    goPackagePath = "github.com/fasthttp-contrib/websocket";
+    fetch = {
+      type = "git";
+      url = "https://github.com/fasthttp-contrib/websocket";
+      rev = "1f3b11f56072";
+      sha256 = "1yacmwmil625p0pzj800h9dnmiab6bjwfmi48p9fcrvy2yyv9b97";
+    };
+  }
   {
     goPackagePath = "github.com/fatih/color";
     fetch = {
@@ -316,12 +388,12 @@
     };
   }
   {
-    goPackagePath = "github.com/gavv/monotime";
+    goPackagePath = "github.com/gavv/httpexpect";
     fetch = {
       type = "git";
-      url = "https://github.com/gavv/monotime";
-      rev = "30dba4353424";
-      sha256 = "0w67yyc9y11dp7lp4b712dkcgbiln1qmgfx1nbbrw3mfkzr61d7g";
+      url = "https://github.com/gavv/httpexpect";
+      rev = "v2.0.0";
+      sha256 = "0dqb7lsinciz594q6jg59hrvk4g4awbs2ybsr580j22j2xag53vs";
     };
   }
   {
@@ -329,7 +401,7 @@
     fetch = {
       type = "git";
       url = "https://github.com/getsentry/raven-go";
-      rev = "v0.1.0";
+      rev = "v0.1.2";
       sha256 = "1dl80kar4lzdcfl3w6jssi1ld6bv0rmx6sp6bz6rzysfr9ilm02z";
     };
   }
@@ -338,8 +410,8 @@
     fetch = {
       type = "git";
       url = "https://github.com/getsentry/sentry-go";
-      rev = "v0.3.0";
-      sha256 = "1919lhvg1swcqyfa6mck6nz53c7n4df21jsz46f7x4wncb6f5il1";
+      rev = "v0.5.1";
+      sha256 = "1kfn0gcb4c6amhagv04ydpl6p9cqw7f0lxas688a0rf89iwdzz89";
     };
   }
   {
@@ -468,6 +540,33 @@
       sha256 = "0m5kl2fq8gf1v4vllgag2xl8fd382sdgqrcdb8f5alsnrdn08kb9";
     };
   }
+  {
+    goPackagePath = "github.com/gobwas/httphead";
+    fetch = {
+      type = "git";
+      url = "https://github.com/gobwas/httphead";
+      rev = "2c6c146eadee";
+      sha256 = "0j7nlrf79cafl8ap69ri2c7v3psr2y133cr2wn735z7yn3dz3kss";
+    };
+  }
+  {
+    goPackagePath = "github.com/gobwas/pool";
+    fetch = {
+      type = "git";
+      url = "https://github.com/gobwas/pool";
+      rev = "v0.2.0";
+      sha256 = "1avpa8c75j1y4hs7awazrjjy7w0pjfw80l424ddn5zyizvh7s67i";
+    };
+  }
+  {
+    goPackagePath = "github.com/gobwas/ws";
+    fetch = {
+      type = "git";
+      url = "https://github.com/gobwas/ws";
+      rev = "v1.0.2";
+      sha256 = "070mfcjbfb40bglc9aw9zjvd4jb1hp3l1s12ww6mjlwbjcg0mm9s";
+    };
+  }
   {
     goPackagePath = "github.com/gogo/protobuf";
     fetch = {
@@ -504,6 +603,15 @@
       sha256 = "07555csk49ara636bhl2vbzziayls3qks8964z0q29g065zliy9j";
     };
   }
+  {
+    goPackagePath = "github.com/golang/lint";
+    fetch = {
+      type = "git";
+      url = "https://github.com/golang/lint";
+      rev = "06c8688daad7";
+      sha256 = "0xi94dwvz50a66bq1hp9fyqkym5mcpdxdb1hrfvicldgjf37lc47";
+    };
+  }
   {
     goPackagePath = "github.com/golang/mock";
     fetch = {
@@ -522,6 +630,15 @@
       sha256 = "1k1wb4zr0qbwgpvz9q5ws9zhlal8hq7dmq62pwxxriksayl6hzym";
     };
   }
+  {
+    goPackagePath = "github.com/gomodule/redigo";
+    fetch = {
+      type = "git";
+      url = "https://github.com/gomodule/redigo";
+      rev = "574c33c3df38";
+      sha256 = "1qpw8mq9xqj1hmpag1av941swkx39qikahsajyhn34rc2q54f4z6";
+    };
+  }
   {
     goPackagePath = "github.com/google/btree";
     fetch = {
@@ -604,12 +721,12 @@
     };
   }
   {
-    goPackagePath = "github.com/gorilla/schema";
+    goPackagePath = "github.com/gorilla/websocket";
     fetch = {
       type = "git";
-      url = "https://github.com/gorilla/schema";
-      rev = "v1.1.0";
-      sha256 = "14d31i3h6bg83r7ncmwm2pirab66z9hza38in18l89pbazxyh2n9";
+      url = "https://github.com/gorilla/websocket";
+      rev = "v1.4.0";
+      sha256 = "00i4vb31nsfkzzk7swvx3i75r2d960js3dri1875vypk3v2s0pzk";
     };
   }
   {
@@ -648,6 +765,15 @@
       sha256 = "00nyn8llqzbfm8aflr9kwsvpzi4kv8v45c141v88xskxp5xf6z49";
     };
   }
+  {
+    goPackagePath = "github.com/hashicorp/go-version";
+    fetch = {
+      type = "git";
+      url = "https://github.com/hashicorp/go-version";
+      rev = "v1.2.0";
+      sha256 = "1bwi6y6111xq8ww8kjq0w1cmz15l1h9hb2id6596l8l0ag1vjj1z";
+    };
+  }
   {
     goPackagePath = "github.com/hashicorp/golang-lru";
     fetch = {
@@ -711,15 +837,6 @@
       sha256 = "1gkizavajqmxm79il8r6cbi0g9ls3vwdh9wr0zy89vc9sq17p3im";
     };
   }
-  {
-    goPackagePath = "github.com/iris-contrib/formBinder";
-    fetch = {
-      type = "git";
-      url = "https://github.com/iris-contrib/formBinder";
-      rev = "v5.0.0";
-      sha256 = "0mqk6j7a9d3y28ad4ylqc7z5w4hmn1ws5wwnyll918xn1wkzr5rg";
-    };
-  }
   {
     goPackagePath = "github.com/iris-contrib/go.uuid";
     fetch = {
@@ -730,12 +847,21 @@
     };
   }
   {
-    goPackagePath = "github.com/iris-contrib/httpexpect";
+    goPackagePath = "github.com/iris-contrib/i18n";
     fetch = {
       type = "git";
-      url = "https://github.com/iris-contrib/httpexpect";
-      rev = "ebe99fcebbce";
-      sha256 = "126c50c6r5l2gdn60jirpb54pqwswxag3wgrv6wcn998h9w9gv8c";
+      url = "https://github.com/iris-contrib/i18n";
+      rev = "987a633949d0";
+      sha256 = "0yslm7hmacc57v970jbys4x5c5yxgcjgff982ngivg9v1a16kifq";
+    };
+  }
+  {
+    goPackagePath = "github.com/iris-contrib/schema";
+    fetch = {
+      type = "git";
+      url = "https://github.com/iris-contrib/schema";
+      rev = "v0.0.1";
+      sha256 = "1a1lk2ll2xv3ljffmfw4q8mqqw727pj8dzs6c8g2hh0b0b050g79";
     };
   }
   {
@@ -824,8 +950,8 @@
     fetch = {
       type = "git";
       url = "https://github.com/kataras/golog";
-      rev = "99c81de45f40";
-      sha256 = "1dgrsvhzymgj7da54ldv8plkxk3n8zh3kc995qxl6mrpz65j801p";
+      rev = "v0.0.9";
+      sha256 = "160hd3z93c9i33q9g1bhfdxmsqg1lanncnrqcsr2444dy5j6ly3i";
     };
   }
   {
@@ -833,8 +959,17 @@
     fetch = {
       type = "git";
       url = "https://github.com/kataras/iris";
-      rev = "v11.1.1";
-      sha256 = "1rxpr5hdj9mji26mlfp4zic0pc6nh93akzccw24a5kynj07g68wg";
+      rev = "v12.0.1";
+      sha256 = "0k1jhamvf0byx6d317gzg6r2jls7bajhhf2spvdinarl2cjnakm5";
+    };
+  }
+  {
+    goPackagePath = "github.com/kataras/neffos";
+    fetch = {
+      type = "git";
+      url = "https://github.com/kataras/neffos";
+      rev = "v0.0.10";
+      sha256 = "0mkqrxff28rcc71nw5qqsywn0fm2jz7magwp9hhvh1s01lgghjdp";
     };
   }
   {
@@ -869,8 +1004,8 @@
     fetch = {
       type = "git";
       url = "https://github.com/klauspost/compress";
-      rev = "v1.4.0";
-      sha256 = "1y7951q0ji894d111lqqbacq64cxyi2dxsni5sqi9488zsasgw8s";
+      rev = "v1.9.0";
+      sha256 = "07vndz6mdaliwagj2xq0y5c5w2zld14p9i5y7r0bkhb7klfyamfk";
     };
   }
   {
@@ -878,8 +1013,8 @@
     fetch = {
       type = "git";
       url = "https://github.com/klauspost/cpuid";
-      rev = "e7e905edc00e";
-      sha256 = "0cmyv3rwv5r5iqvvfhbiwp3jsfa40c6xfm42nxbngd5lygjcwwgf";
+      rev = "v1.2.1";
+      sha256 = "1071wchrs37bvpb99fwf19fjrpz0yaqipi2y2hjvim419flvd49x";
     };
   }
   {
@@ -932,8 +1067,8 @@
     fetch = {
       type = "git";
       url = "https://github.com/labstack/echo";
-      rev = "v4.1.10";
-      sha256 = "0qg9ykmhgldiv2v1w8sz8x0j0bgqf11ghzrim59fb6pxz8qgg25h";
+      rev = "v4.1.11";
+      sha256 = "0b14vgwzznn7wzyjb98xdmq4wjg16l3y62njiwfz4qsm4pwzk405";
     };
   }
   {
@@ -954,6 +1089,15 @@
       sha256 = "08j1smm6rassdssdks4yh9aspa1dv1g5nvwimmknspvhx8a7waqz";
     };
   }
+  {
+    goPackagePath = "github.com/libgit2/git2go";
+    fetch = {
+      type = "git";
+      url = "https://github.com/libgit2/git2go";
+      rev = "ecaeb7a21d47";
+      sha256 = "14r7ryff93r49g94f6kg66xc0y6rwb31lj22s3qmzmlgywk0pgvr";
+    };
+  }
   {
     goPackagePath = "github.com/lightstep/lightstep-tracer-go";
     fetch = {
@@ -999,6 +1143,15 @@
       sha256 = "00b3ssm7wiqln3k54z2wcnxr3k3c7m1ybyhb9h8ixzbzspld0qzs";
     };
   }
+  {
+    goPackagePath = "github.com/mattn/go-shellwords";
+    fetch = {
+      type = "git";
+      url = "https://github.com/mattn/go-shellwords";
+      rev = "2444a32a19f4";
+      sha256 = "08zcgr1az1n8zaxzwdd205j86hczgyc52nxfnw5avpw7rrkf7v0d";
+    };
+  }
   {
     goPackagePath = "github.com/mattn/go-sqlite3";
     fetch = {
@@ -1026,6 +1179,24 @@
       sha256 = "1d0c1isd2lk9pnfq2nk0aih356j30k3h1gi2w0ixsivi5csl7jya";
     };
   }
+  {
+    goPackagePath = "github.com/mediocregopher/mediocre-go-lib";
+    fetch = {
+      type = "git";
+      url = "https://github.com/mediocregopher/mediocre-go-lib";
+      rev = "cb65787f37ed";
+      sha256 = "0lg6q76fxjhxv05m80k4l6nrkj9qwzafs2mb2gbvhznxh8m0cv9j";
+    };
+  }
+  {
+    goPackagePath = "github.com/mediocregopher/radix";
+    fetch = {
+      type = "git";
+      url = "https://github.com/mediocregopher/radix";
+      rev = "v3.3.0";
+      sha256 = "0pchn5z2g4wnf87350war5fr9pqpdksia1ffvw7cphg4q9blggfx";
+    };
+  }
   {
     goPackagePath = "github.com/microcosm-cc/bluemonday";
     fetch = {
@@ -1098,6 +1269,33 @@
       sha256 = "0nbrnpk7bkmqg9mzwsxlm0y8m7s9qd9phr1q30qlx2qmdmz7c1mf";
     };
   }
+  {
+    goPackagePath = "github.com/nats-io/nats.go";
+    fetch = {
+      type = "git";
+      url = "https://github.com/nats-io/nats.go";
+      rev = "v1.8.1";
+      sha256 = "0h9zzpjl6ac227bhf0i4ram9a5jlibq53pawv0zzxdirxrnp1vkj";
+    };
+  }
+  {
+    goPackagePath = "github.com/nats-io/nkeys";
+    fetch = {
+      type = "git";
+      url = "https://github.com/nats-io/nkeys";
+      rev = "v0.0.2";
+      sha256 = "0kibc1g60w031rssk3vs74gfick3jdl3igckn1v4k8b5grawcks1";
+    };
+  }
+  {
+    goPackagePath = "github.com/nats-io/nuid";
+    fetch = {
+      type = "git";
+      url = "https://github.com/nats-io/nuid";
+      rev = "v1.0.1";
+      sha256 = "11zbhg4kds5idsya04bwz4plj0mmiigypzppzih731ppbk2ms1zg";
+    };
+  }
   {
     goPackagePath = "github.com/olekukonko/tablewriter";
     fetch = {
@@ -1112,8 +1310,8 @@
     fetch = {
       type = "git";
       url = "https://github.com/onsi/ginkgo";
-      rev = "v1.10.1";
-      sha256 = "033a42h1wzmji57p86igg9whvsbp6nvfdsypskw738ys903n3z4d";
+      rev = "v1.10.3";
+      sha256 = "00a40by9f5ylycnar8h3p9b4z5rcsvfvg4j3v5s5mchdqrqjv1pc";
     };
   }
   {
@@ -1121,8 +1319,8 @@
     fetch = {
       type = "git";
       url = "https://github.com/onsi/gomega";
-      rev = "v1.7.0";
-      sha256 = "09j6wq425wgzzsbwm9ckhfgl2capv3yyqbrf45qyrjwkzm49i02y";
+      rev = "v1.7.1";
+      sha256 = "06p3x0910cdaa64l7d44s728d4j3yhps315dlcvrbjzhljjj7mam";
     };
   }
   {
@@ -1134,6 +1332,33 @@
       sha256 = "0i0ghg94dg8lk05mw5n23983wq04yjvkjmdkc9z5y1f3508938h9";
     };
   }
+  {
+    goPackagePath = "github.com/otiai10/copy";
+    fetch = {
+      type = "git";
+      url = "https://github.com/otiai10/copy";
+      rev = "v1.0.1";
+      sha256 = "0xmy0kfcx48q10s040579pcjswfaxlwhv7a2z07z9r92fdrgw03k";
+    };
+  }
+  {
+    goPackagePath = "github.com/otiai10/curr";
+    fetch = {
+      type = "git";
+      url = "https://github.com/otiai10/curr";
+      rev = "v1.0.0";
+      sha256 = "0fpw20adq2wff7l4c87zaavj9jra4d64a8bbjixiiv3bbarim987";
+    };
+  }
+  {
+    goPackagePath = "github.com/otiai10/mint";
+    fetch = {
+      type = "git";
+      url = "https://github.com/otiai10/mint";
+      rev = "v1.3.0";
+      sha256 = "0kfc95jc2hfgwzcpdfa5hrxgj7s6rzx5jc0n1sn863bsngx2q1ca";
+    };
+  }
   {
     goPackagePath = "github.com/pelletier/go-toml";
     fetch = {
@@ -1157,8 +1382,8 @@
     fetch = {
       type = "git";
       url = "https://github.com/pingcap/errors";
-      rev = "v0.11.1";
-      sha256 = "00wr0l4cwq0qx8jw51j0n7pbh9l7hdq2874x9rf1mz5svz1wbmcp";
+      rev = "v0.11.4";
+      sha256 = "02k6b30m42aya763fnwx3paq4r8h28yav4i2kv2z4r28r70xxcgn";
     };
   }
   {
@@ -1310,7 +1535,7 @@
     fetch = {
       type = "git";
       url = "https://github.com/smartystreets/goconvey";
-      rev = "505e41936337";
+      rev = "v1.6.4";
       sha256 = "07zjxwszayal88z1j2bwnqrsa32vg8l4nivks5yfr9j8xfsw7n6m";
     };
   }
@@ -1427,8 +1652,8 @@
     fetch = {
       type = "git";
       url = "https://github.com/ugorji/go";
-      rev = "v1.1.4";
-      sha256 = "0ma2qvn5wqvjidpdz74x832a813qnr1cxbx6n6n125ak9b3wbn5w";
+      rev = "v1.1.7";
+      sha256 = "068gja55kbh2iivp03x4n9dcml0rxv0k64ivkmq06si2ar1835rm";
     };
   }
   {
@@ -1454,8 +1679,8 @@
     fetch = {
       type = "git";
       url = "https://github.com/valyala/fasthttp";
-      rev = "v1.4.0";
-      sha256 = "0kypc7r91n61fm6qsadza1aiy9n6byghvcxzvx7agi6yzrllk956";
+      rev = "v1.6.0";
+      sha256 = "1r1hm4rv9w6x829jjg75y8xd523b76parsyyvjwyz8k2l6bm4h0b";
     };
   }
   {
@@ -1481,8 +1706,8 @@
     fetch = {
       type = "git";
       url = "https://github.com/xeipuuv/gojsonpointer";
-      rev = "df4f5c81cb3b";
-      sha256 = "0dfwc66z5gq75m3z7va80c10c22ijiq99bahq86l26ki71g286xn";
+      rev = "4e3ac2762d5f";
+      sha256 = "13y6iq2nzf9z4ls66bfgnnamj2m3438absmbpqry64bpwjfbsi9q";
     };
   }
   {
@@ -1499,8 +1724,8 @@
     fetch = {
       type = "git";
       url = "https://github.com/xeipuuv/gojsonschema";
-      rev = "v1.1.0";
-      sha256 = "10gn5y4l72zknj21mff29d9vnk4pz7jnw39xnlsb373lsiih91xg";
+      rev = "v1.2.0";
+      sha256 = "1mqiq0r8qw4qlfp3ls8073r6514rmzwrmdn4j33rppk3zh942i6l";
     };
   }
   {
@@ -1557,13 +1782,22 @@
       sha256 = "172s7sv5bgc40x81k18hypf9c4n8hn9v5w5zwyr4mi5prbavqcci";
     };
   }
+  {
+    goPackagePath = "gitlab.com/gitlab-org/gitlab-shell";
+    fetch = {
+      type = "git";
+      url = "https://gitlab.com/gitlab-org/gitlab-shell.git";
+      rev = "716e30c55e89";
+      sha256 = "0g2bgwm5rf93xfd40j3d2a5js1a212r2l2qdbds3gp7h0v73npjw";
+    };
+  }
   {
     goPackagePath = "gitlab.com/gitlab-org/labkit";
     fetch = {
       type = "git";
       url = "https://gitlab.com/gitlab-org/labkit.git";
-      rev = "fac94cb428e6";
-      sha256 = "19wvfjij6zm88fxbx0cngr6ny4yh3fw469d6vlv741b37s07w3j0";
+      rev = "0149780c759d";
+      sha256 = "1krp5jkwpckpdznbl9xp4yvq6cii750r24agcni3snbbs8hd8gb1";
     };
   }
   {
diff --git a/pkgs/applications/version-management/gitlab/gitaly/gemset.nix b/pkgs/applications/version-management/gitlab/gitaly/gemset.nix
index becc33a6e5c7..f693d5b4c7ba 100644
--- a/pkgs/applications/version-management/gitlab/gitaly/gemset.nix
+++ b/pkgs/applications/version-management/gitlab/gitaly/gemset.nix
@@ -13,10 +13,10 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "0zg96vjjw1kbli6nk6cyk64zfh4lgpl7fqx38ncbgfacl4dq7y0b";
+      sha256 = "1665r4ffqdpykxwpgdnaq7xsaz1nfswc5wjs2qr0npx8bq7g49kh";
       type = "gem";
     };
-    version = "6.0.2";
+    version = "6.0.3.1";
   };
   actionview = {
     dependencies = ["activesupport" "builder" "erubi" "rails-dom-testing" "rails-html-sanitizer"];
@@ -24,10 +24,10 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "1bfh9z3n98c76c6jdp6avh75wsckxyp74r59hmgnqdhfznbkppv4";
+      sha256 = "1n21pswh3k7m33vzhxyrbi5lj64b1138yqv34jjhkhlq3474b4rh";
       type = "gem";
     };
-    version = "6.0.2";
+    version = "6.0.3.1";
   };
   activesupport = {
     dependencies = ["concurrent-ruby" "i18n" "minitest" "tzinfo" "zeitwerk"];
@@ -35,10 +35,10 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "1brlp5pmawb2hqdybjb732zxxkamcmis6px3wyh09rjlc0gqnzzz";
+      sha256 = "1l29n9n38c9lpy5smh26r7fy7jp2bpjqlzhxgsr79cv7xpwlrbhs";
       type = "gem";
     };
-    version = "6.0.2";
+    version = "6.0.3.1";
   };
   adamantium = {
     dependencies = ["ice_nine" "memoizable"];
@@ -118,10 +118,10 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "1x07r23s7836cpp5z9yrlbpljcxpax14yw4fy4bnp6crhr6x24an";
+      sha256 = "094387x4yasb797mv07cs3g6f08y56virc2rjcpb1k79rzaj3nhl";
       type = "gem";
     };
-    version = "1.1.5";
+    version = "1.1.6";
   };
   crack = {
     dependencies = ["safe_yaml"];
@@ -213,10 +213,10 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "06mvxpjply8qh4j3fj9wh08kdzwkbnvsiysh0vrhlk5cwxzjmblh";
+      sha256 = "10lfhahnnc91v63xpvk65apn61pib086zha3z5sp1xk9acfx12h4";
       type = "gem";
     };
-    version = "1.11.1";
+    version = "1.12.2";
   };
   gemojione = {
     dependencies = ["json"];
@@ -233,10 +233,10 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "092bq7bjfj2yvss2ig6jb71j0h04cigq79xxfis37j315iixl12j";
+      sha256 = "0rhw05d88l928g6y2bngvmr66565b2z822hyynmb13b7khf07y1a";
       type = "gem";
     };
-    version = "7.5.1";
+    version = "7.9.0";
   };
   github-markup = {
     source = {
@@ -252,10 +252,10 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "0dwrggw38wkadm9i1q8bj15lf0ik5z6qlbbggkgcvmbxb0a4hrmx";
+      sha256 = "0y21k8bix3h2qdys2kz2z831cclmx3zc15x67cp8s945dkmh39sj";
       type = "gem";
     };
-    version = "4.2.7.8";
+    version = "4.2.7.9";
   };
   gitlab-gollum-rugged_adapter = {
     dependencies = ["mime-types" "rugged"];
@@ -274,30 +274,30 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "1s1cgnnzlnfglsh5r0iihgvyasa2zbqkyrrnbxshvnkddb10i94z";
+      sha256 = "0a63zgjll83b25hiq8m4sk75jci2rj8z46lss0j3bc6zi3pxnzax";
       type = "gem";
     };
-    version = "0.9.1";
+    version = "0.12.0";
   };
   gitlab-markup = {
     groups = ["default"];
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "0rqf3jmyn78r3ysy3bjyx7s4yv3xipxlmqlmbyrbksna19rrx08d";
+      sha256 = "0xnlra517pfj3hx07kasbqlcw51ix4xajr6bsd3mwg8bc92dlwy7";
       type = "gem";
     };
-    version = "1.7.0";
+    version = "1.7.1";
   };
   google-protobuf = {
     groups = ["default"];
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "1swxvka4qcfa986qr5d3hxqlcsraxfb6fsc0mf2ngxmq15wad8br";
+      sha256 = "0by3289irdklb9gjqw41fq6mg6yja3iyzh99dj8p8z9l4brllqn4";
       type = "gem";
     };
-    version = "3.11.4";
+    version = "3.8.0";
   };
   googleapis-common-protos-types = {
     dependencies = ["google-protobuf"];
@@ -316,10 +316,20 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "0jbfnsdvb9hbqgkh2qkckzxvdwcbhdkwwvlnc5mb8679hxz7b7bs";
+      sha256 = "18wikj9qd4jb4lks55cs2cf3q7fifnanm9z9ywnxhpj57vbnilpf";
       type = "gem";
     };
-    version = "1.27.0";
+    version = "1.24.0";
+  };
+  grpc-tools = {
+    groups = ["development" "test"];
+    platforms = [];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0pjs2sm43mai2fy0jsbxl8rs9bych8f5j8hv630fjwh0323cmcc9";
+      type = "gem";
+    };
+    version = "1.0.1";
   };
   hashdiff = {
     groups = ["default" "development" "test"];
@@ -404,10 +414,10 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "1g7ps9m3s14cajhxrfgbzahv9i3gy47s4hqrv3mpybpj5cyr0srn";
+      sha256 = "0jk9fgn5ayzbqvzqm11gbkqvas77zdbpkvynlylyiwynclgrn040";
       type = "gem";
     };
-    version = "2.4.0";
+    version = "2.5.0";
   };
   memoizable = {
     dependencies = ["thread_safe"];
@@ -669,10 +679,10 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "1n9h0ls2a2zq0bcsw31wxci1wdxb8s3vglfadxpcs6b04vkf6nqq";
+      sha256 = "102rc07d78k5bkl0s9nd1gw6wz0w0zcvg4g5sl7z9xxi4r793c35";
       type = "gem";
     };
-    version = "3.18.0";
+    version = "3.19.0";
   };
   rspec = {
     dependencies = ["rspec-core" "rspec-expectations" "rspec-mocks"];
@@ -861,10 +871,10 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "04f18jdv6z3zn3va50rqq35nj3izjpb72fnf21ixm7vanq6nc4fp";
+      sha256 = "1i3jh086w1kbdj3k5l60lc3nwbanmzdf8yjj3mlrx9b2gjjxhi9r";
       type = "gem";
     };
-    version = "1.2.6";
+    version = "1.2.7";
   };
   unicode-display_width = {
     groups = ["default" "development" "test"];
@@ -909,9 +919,9 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "0jywi63w1m2b2w9fj9rjb9n3imf6p5bfijfmml1xzdnsrdrjz0x1";
+      sha256 = "1akpm3pwvyiack2zk6giv9yn3cqb8pw6g40p4394pdc3xmy3s4k0";
       type = "gem";
     };
-    version = "2.2.2";
+    version = "2.3.0";
   };
 }
\ No newline at end of file
diff --git a/pkgs/applications/version-management/gitlab/gitlab-shell/default.nix b/pkgs/applications/version-management/gitlab/gitlab-shell/default.nix
index e9a3ccfa24aa..3e32e90a6d2a 100644
--- a/pkgs/applications/version-management/gitlab/gitlab-shell/default.nix
+++ b/pkgs/applications/version-management/gitlab/gitlab-shell/default.nix
@@ -2,12 +2,12 @@
 
 buildGoPackage rec {
   pname = "gitlab-shell";
-  version = "12.2.0";
+  version = "13.2.0";
   src = fetchFromGitLab {
     owner = "gitlab-org";
     repo = "gitlab-shell";
     rev = "v${version}";
-    sha256 = "0zjpjk7iv083ys11sn3hiqawp09zgi9hhhv4hdh13axaw9ld340v";
+    sha256 = "0drdpg4nmhzrmy8sl1f3hcd1278bpapgf0wmhi94xlyayh47j53a";
   };
 
   buildInputs = [ ruby ];
diff --git a/pkgs/applications/version-management/gitlab/gitlab-workhorse/default.nix b/pkgs/applications/version-management/gitlab/gitlab-workhorse/default.nix
index 7679439465de..f6710643f6d8 100644
--- a/pkgs/applications/version-management/gitlab/gitlab-workhorse/default.nix
+++ b/pkgs/applications/version-management/gitlab/gitlab-workhorse/default.nix
@@ -3,13 +3,13 @@
 buildGoPackage rec {
   pname = "gitlab-workhorse";
 
-  version = "8.30.2";
+  version = "8.31.1";
 
   src = fetchFromGitLab {
     owner = "gitlab-org";
     repo = "gitlab-workhorse";
     rev = "v${version}";
-    sha256 = "1ws59ry16kx4nqp92xcqw3fri570pvpdgvy822ndi7rybw5xij7p";
+    sha256 = "1c2y1icil98qay9d95q1rlpi0ffhll990grkkib9srsn55b2i86v";
   };
 
   goPackagePath = "gitlab.com/gitlab-org/gitlab-workhorse";
diff --git a/pkgs/applications/version-management/gitlab/gitlab-workhorse/deps.nix b/pkgs/applications/version-management/gitlab/gitlab-workhorse/deps.nix
index 63b52b1c85f2..530eb073c7b5 100644
--- a/pkgs/applications/version-management/gitlab/gitlab-workhorse/deps.nix
+++ b/pkgs/applications/version-management/gitlab/gitlab-workhorse/deps.nix
@@ -9,6 +9,15 @@
       sha256 = "0pbz5migljd5whxh6z1w79cwx93n85mcs3x1bckl27yzaa4lvqsl";
     };
   }
+  {
+    goPackagePath = "dmitri.shuralyov.com/gpu/mtl";
+    fetch = {
+      type = "git";
+      url = "https://dmitri.shuralyov.com/gpu/mtl";
+      rev = "666a987793e9";
+      sha256 = "1isd03hgiwcf2ld1rlp0plrnfz7r4i7c5q4kb6hkcd22axnmrv0z";
+    };
+  }
   {
     goPackagePath = "github.com/BurntSushi/toml";
     fetch = {
diff --git a/pkgs/applications/version-management/gitlab/rubyEnv/Gemfile b/pkgs/applications/version-management/gitlab/rubyEnv/Gemfile
index d15628eb83c6..9c8c5e8b30d7 100644
--- a/pkgs/applications/version-management/gitlab/rubyEnv/Gemfile
+++ b/pkgs/applications/version-management/gitlab/rubyEnv/Gemfile
@@ -1,6 +1,6 @@
 source 'https://rubygems.org'
 
-gem 'rails', '6.0.2'
+gem 'rails', '~> 6.0.3'
 
 gem 'bootsnap', '~> 1.4.6'
 
@@ -26,7 +26,7 @@ gem 'marginalia', '~> 1.8.0'
 
 # Authentication libraries
 gem 'devise', '~> 4.6'
-gem 'doorkeeper', '~> 5.0.2'
+gem 'doorkeeper', '~> 5.0.3'
 gem 'doorkeeper-openid_connect', '~> 1.6.3'
 gem 'omniauth', '~> 1.8'
 gem 'omniauth-auth0', '~> 2.0.0'
@@ -138,7 +138,7 @@ gem 'faraday_middleware-aws-signers-v4'
 # Markdown and HTML processing
 gem 'html-pipeline', '~> 2.12'
 gem 'deckar01-task_list', '2.3.1'
-gem 'gitlab-markup', '~> 1.7.0'
+gem 'gitlab-markup', '~> 1.7.1'
 gem 'github-markup', '~> 1.7.0', require: 'github/markup'
 gem 'commonmarker', '~> 0.20'
 gem 'RedCloth', '~> 4.3.2'
@@ -148,11 +148,11 @@ gem 'creole', '~> 0.5.0'
 gem 'wikicloth', '0.8.1'
 gem 'asciidoctor', '~> 2.0.10'
 gem 'asciidoctor-include-ext', '~> 0.3.1', require: false
-gem 'asciidoctor-plantuml', '0.0.10'
-gem 'rouge', '~> 3.18.0'
+gem 'asciidoctor-plantuml', '~> 0.0.12'
+gem 'rouge', '~> 3.19.0'
 gem 'truncato', '~> 0.7.11'
 gem 'bootstrap_form', '~> 4.2.0'
-gem 'nokogiri', '~> 1.10.5'
+gem 'nokogiri', '~> 1.10.9'
 gem 'escape_utils', '~> 1.1'
 
 # Calendar rendering
@@ -166,7 +166,7 @@ gem 'diff_match_patch', '~> 0.1.0'
 gem 'rack', '~> 2.0.9'
 
 group :unicorn do
-  gem 'unicorn', '~> 5.4.1'
+  gem 'unicorn', '~> 5.5'
   gem 'unicorn-worker-killer', '~> 0.4.4'
 end
 
@@ -204,7 +204,7 @@ gem 'ruby-progressbar'
 gem 'settingslogic', '~> 2.0.9'
 
 # Linear-time regex library for untrusted regular expressions
-gem 're2', '~> 1.1.1'
+gem 're2', '~> 1.2.0'
 
 # Misc
 
@@ -230,7 +230,7 @@ gem 'discordrb-webhooks-blackst0ne', '~> 3.3', require: false
 gem 'hipchat', '~> 1.5.0'
 
 # Jira integration
-gem 'jira-ruby', '~> 1.7'
+gem 'jira-ruby', '~> 2.0.0'
 gem 'atlassian-jwt', '~> 0.2.0'
 
 # Flowdock integration
@@ -287,13 +287,13 @@ gem 'addressable', '~> 2.7'
 gem 'font-awesome-rails', '~> 4.7'
 gem 'gemojione', '~> 3.3'
 gem 'gon', '~> 6.2'
-gem 'request_store', '~> 1.3'
+gem 'request_store', '~> 1.5'
 gem 'base32', '~> 0.3.0'
 
 gem "gitlab-license", "~> 1.0"
 
 # Protect against bruteforcing
-gem 'rack-attack', '~> 6.2.0'
+gem 'rack-attack', '~> 6.3.0'
 
 # Sentry integration
 gem 'sentry-raven', '~> 2.9'
@@ -318,13 +318,9 @@ gem 'peek', '~> 1.1'
 # Snowplow events tracking
 gem 'snowplow-tracker', '~> 0.6.1'
 
-# Memory benchmarks
-gem 'derailed_benchmarks', require: false
-
 # Metrics
 group :metrics do
   gem 'method_source', '~> 0.8', require: false
-  gem 'influxdb', '~> 0.2', require: false
 
   # Prometheus
   gem 'prometheus-client-mmap', '~> 0.10.0'
@@ -355,7 +351,7 @@ group :development, :test do
 
   gem 'database_cleaner', '~> 1.7.0'
   gem 'factory_bot_rails', '~> 5.1.0'
-  gem 'rspec-rails', '~> 4.0.0.beta4'
+  gem 'rspec-rails', '~> 4.0.0'
 
   # Prevent occasions where minitest is not bundled in packaged versions of ruby (see #3826)
   gem 'minitest', '~> 5.11.0'
@@ -414,12 +410,15 @@ group :test do
   gem 'test-prof', '~> 0.10.0'
   gem 'rspec_junit_formatter'
   gem 'guard-rspec'
+
+  # Moved in `test` because https://gitlab.com/gitlab-org/gitlab/-/issues/217527
+  gem 'derailed_benchmarks', require: false
 end
 
 gem 'octokit', '~> 4.15'
 
 # https://gitlab.com/gitlab-org/gitlab/issues/207207
-gem 'gitlab-mail_room', '~> 0.0.3', require: 'mail_room'
+gem 'gitlab-mail_room', '~> 0.0.4', require: 'mail_room'
 
 gem 'email_reply_trimmer', '~> 0.1'
 gem 'html2text'
@@ -445,7 +444,7 @@ gem 'sys-filesystem', '~> 1.1.6'
 gem 'net-ntp'
 
 # SSH host key support
-gem 'net-ssh', '~> 5.2'
+gem 'net-ssh', '~> 6.0'
 gem 'sshkey', '~> 2.0'
 
 # Required for ED25519 SSH host key support
@@ -455,7 +454,7 @@ group :ed25519 do
 end
 
 # Gitaly GRPC protocol definitions
-gem 'gitaly', '~> 12.9.0.pre.rc4'
+gem 'gitaly', '~> 13.0.0.pre.rc1'
 
 gem 'grpc', '~> 1.24.0'
 
@@ -481,8 +480,6 @@ gem 'countries', '~> 3.0'
 
 gem 'retriable', '~> 3.1.2'
 
-gem 'liquid', '~> 4.0'
-
 # LRU cache
 gem 'lru_redux'
 
@@ -495,3 +492,9 @@ gem 'mail', '= 2.7.1'
 
 # File encryption
 gem 'lockbox', '~> 0.3.3'
+
+# Email validation
+gem 'valid_email', '~> 0.1'
+
+# JSON
+gem 'json', '~> 2.3.0'
diff --git a/pkgs/applications/version-management/gitlab/rubyEnv/Gemfile.lock b/pkgs/applications/version-management/gitlab/rubyEnv/Gemfile.lock
index efe1ecca4678..723863edfd93 100644
--- a/pkgs/applications/version-management/gitlab/rubyEnv/Gemfile.lock
+++ b/pkgs/applications/version-management/gitlab/rubyEnv/Gemfile.lock
@@ -6,64 +6,64 @@ GEM
     ace-rails-ap (4.1.2)
     acme-client (2.0.5)
       faraday (~> 0.9, >= 0.9.1)
-    actioncable (6.0.2)
-      actionpack (= 6.0.2)
+    actioncable (6.0.3)
+      actionpack (= 6.0.3)
       nio4r (~> 2.0)
       websocket-driver (>= 0.6.1)
-    actionmailbox (6.0.2)
-      actionpack (= 6.0.2)
-      activejob (= 6.0.2)
-      activerecord (= 6.0.2)
-      activestorage (= 6.0.2)
-      activesupport (= 6.0.2)
+    actionmailbox (6.0.3)
+      actionpack (= 6.0.3)
+      activejob (= 6.0.3)
+      activerecord (= 6.0.3)
+      activestorage (= 6.0.3)
+      activesupport (= 6.0.3)
       mail (>= 2.7.1)
-    actionmailer (6.0.2)
-      actionpack (= 6.0.2)
-      actionview (= 6.0.2)
-      activejob (= 6.0.2)
+    actionmailer (6.0.3)
+      actionpack (= 6.0.3)
+      actionview (= 6.0.3)
+      activejob (= 6.0.3)
       mail (~> 2.5, >= 2.5.4)
       rails-dom-testing (~> 2.0)
-    actionpack (6.0.2)
-      actionview (= 6.0.2)
-      activesupport (= 6.0.2)
-      rack (~> 2.0)
+    actionpack (6.0.3)
+      actionview (= 6.0.3)
+      activesupport (= 6.0.3)
+      rack (~> 2.0, >= 2.0.8)
       rack-test (>= 0.6.3)
       rails-dom-testing (~> 2.0)
       rails-html-sanitizer (~> 1.0, >= 1.2.0)
-    actiontext (6.0.2)
-      actionpack (= 6.0.2)
-      activerecord (= 6.0.2)
-      activestorage (= 6.0.2)
-      activesupport (= 6.0.2)
+    actiontext (6.0.3)
+      actionpack (= 6.0.3)
+      activerecord (= 6.0.3)
+      activestorage (= 6.0.3)
+      activesupport (= 6.0.3)
       nokogiri (>= 1.8.5)
-    actionview (6.0.2)
-      activesupport (= 6.0.2)
+    actionview (6.0.3)
+      activesupport (= 6.0.3)
       builder (~> 3.1)
       erubi (~> 1.4)
       rails-dom-testing (~> 2.0)
       rails-html-sanitizer (~> 1.1, >= 1.2.0)
-    activejob (6.0.2)
-      activesupport (= 6.0.2)
+    activejob (6.0.3)
+      activesupport (= 6.0.3)
       globalid (>= 0.3.6)
-    activemodel (6.0.2)
-      activesupport (= 6.0.2)
-    activerecord (6.0.2)
-      activemodel (= 6.0.2)
-      activesupport (= 6.0.2)
+    activemodel (6.0.3)
+      activesupport (= 6.0.3)
+    activerecord (6.0.3)
+      activemodel (= 6.0.3)
+      activesupport (= 6.0.3)
     activerecord-explain-analyze (0.1.0)
       activerecord (>= 4)
       pg
-    activestorage (6.0.2)
-      actionpack (= 6.0.2)
-      activejob (= 6.0.2)
-      activerecord (= 6.0.2)
+    activestorage (6.0.3)
+      actionpack (= 6.0.3)
+      activejob (= 6.0.3)
+      activerecord (= 6.0.3)
       marcel (~> 0.3.1)
-    activesupport (6.0.2)
+    activesupport (6.0.3)
       concurrent-ruby (~> 1.0, >= 1.0.2)
       i18n (>= 0.7, < 2)
       minitest (~> 5.1)
       tzinfo (~> 1.1)
-      zeitwerk (~> 2.2)
+      zeitwerk (~> 2.2, >= 2.2.2)
     acts-as-taggable-on (6.5.0)
       activerecord (>= 5.0, < 6.1)
     adamantium (0.2.0)
@@ -84,7 +84,7 @@ GEM
     asciidoctor (2.0.10)
     asciidoctor-include-ext (0.3.1)
       asciidoctor (>= 1.5.6, < 3.0.0)
-    asciidoctor-plantuml (0.0.10)
+    asciidoctor-plantuml (0.0.12)
       asciidoctor (>= 1.5.6, < 3.0.0)
     ast (2.4.0)
     atlassian-jwt (0.2.0)
@@ -153,7 +153,6 @@ GEM
       activemodel (>= 4.0.0)
       activesupport (>= 4.0.0)
       mime-types (>= 1.16)
-    cause (0.1)
     character_set (1.1.2)
     charlock_holmes (0.7.6)
     childprocess (3.0.0)
@@ -245,7 +244,7 @@ GEM
     docile (1.3.2)
     domain_name (0.5.20180417)
       unf (>= 0.0.5, < 1.0.0)
-    doorkeeper (5.0.2)
+    doorkeeper (5.0.3)
       railties (>= 4.2)
     doorkeeper-openid_connect (1.6.3)
       doorkeeper (>= 5.0, < 5.2)
@@ -378,7 +377,7 @@ GEM
       po_to_json (>= 1.0.0)
       rails (>= 3.2.0)
     git (1.5.0)
-    gitaly (12.9.0.pre.rc4)
+    gitaly (13.0.0.pre.rc1)
       grpc (~> 1.0)
     github-markup (1.7.0)
     gitlab-chronic (0.10.5)
@@ -391,8 +390,8 @@ GEM
       opentracing (~> 0.4)
       redis (> 3.0.0, < 5.0.0)
     gitlab-license (1.0.0)
-    gitlab-mail_room (0.0.3)
-    gitlab-markup (1.7.0)
+    gitlab-mail_room (0.0.4)
+    gitlab-markup (1.7.1)
     gitlab-net-dns (0.9.1)
     gitlab-puma (4.3.3.gitlab.2)
       nio4r (~> 2.0)
@@ -535,9 +534,6 @@ GEM
     i18n_data (0.8.0)
     icalendar (2.4.1)
     ice_nine (0.11.2)
-    influxdb (0.2.3)
-      cause
-      json
     invisible_captcha (0.12.1)
       rails (>= 3.2.0)
     ipaddress (0.8.3)
@@ -545,7 +541,7 @@ GEM
       opentracing (~> 0.3)
       thrift
     jaro_winkler (1.5.4)
-    jira-ruby (1.7.1)
+    jira-ruby (2.0.0)
       activesupport
       atlassian-jwt
       multipart-post
@@ -555,7 +551,7 @@ GEM
       character_set (~> 1.1)
       regexp_parser (~> 1.1)
       regexp_property_values (~> 0.3)
-    json (1.8.6)
+    json (2.3.0)
     json-jwt (1.11.0)
       activesupport (>= 4.2)
       aes_key_wrap
@@ -575,7 +571,7 @@ GEM
       activerecord
       kaminari-core (= 1.0.1)
     kaminari-core (1.0.1)
-    kgio (2.11.2)
+    kgio (2.11.3)
     knapsack (1.17.0)
       rake
     kramdown (2.1.0)
@@ -602,7 +598,6 @@ GEM
       xml-simple
     licensee (8.9.2)
       rugged (~> 0.24)
-    liquid (4.0.3)
     listen (3.1.5)
       rb-fsevent (~> 0.9, >= 0.9.4)
       rb-inotify (~> 0.9, >= 0.9.7)
@@ -614,7 +609,7 @@ GEM
       activesupport (>= 4)
       railties (>= 4)
       request_store (~> 1.0)
-    loofah (2.4.0)
+    loofah (2.5.0)
       crass (~> 1.0.2)
       nokogiri (>= 1.5.9)
     lru_redux (1.1.0)
@@ -634,7 +629,7 @@ GEM
     mime-types (3.2.2)
       mime-types-data (~> 3.2015)
     mime-types-data (3.2019.0331)
-    mimemagic (0.3.3)
+    mimemagic (0.3.5)
     mini_histogram (0.1.3)
     mini_magick (4.9.5)
     mini_mime (1.0.2)
@@ -653,11 +648,11 @@ GEM
     nenv (0.3.0)
     net-ldap (0.16.2)
     net-ntp (2.1.3)
-    net-ssh (5.2.0)
+    net-ssh (6.0.0)
     netrc (0.11.0)
     nio4r (2.5.2)
     no_proxy_fix (0.1.2)
-    nokogiri (1.10.8)
+    nokogiri (1.10.9)
       mini_portile2 (~> 2.4.0)
     nokogumbo (1.5.0)
       nokogiri
@@ -791,7 +786,7 @@ GEM
     rack (2.0.9)
     rack-accept (0.4.5)
       rack (>= 0.4)
-    rack-attack (6.2.0)
+    rack-attack (6.3.0)
       rack (>= 1.0, < 3)
     rack-cors (1.0.6)
       rack (>= 1.6.0)
@@ -808,20 +803,20 @@ GEM
     rack-test (1.1.0)
       rack (>= 1.0, < 3)
     rack-timeout (0.5.1)
-    rails (6.0.2)
-      actioncable (= 6.0.2)
-      actionmailbox (= 6.0.2)
-      actionmailer (= 6.0.2)
-      actionpack (= 6.0.2)
-      actiontext (= 6.0.2)
-      actionview (= 6.0.2)
-      activejob (= 6.0.2)
-      activemodel (= 6.0.2)
-      activerecord (= 6.0.2)
-      activestorage (= 6.0.2)
-      activesupport (= 6.0.2)
+    rails (6.0.3)
+      actioncable (= 6.0.3)
+      actionmailbox (= 6.0.3)
+      actionmailer (= 6.0.3)
+      actionpack (= 6.0.3)
+      actiontext (= 6.0.3)
+      actionview (= 6.0.3)
+      activejob (= 6.0.3)
+      activemodel (= 6.0.3)
+      activerecord (= 6.0.3)
+      activestorage (= 6.0.3)
+      activesupport (= 6.0.3)
       bundler (>= 1.3.0)
-      railties (= 6.0.2)
+      railties (= 6.0.3)
       sprockets-rails (>= 2.0.0)
     rails-controller-testing (1.0.4)
       actionpack (>= 5.0.1.x)
@@ -835,14 +830,14 @@ GEM
     rails-i18n (6.0.0)
       i18n (>= 0.7, < 2)
       railties (>= 6.0.0, < 7)
-    railties (6.0.2)
-      actionpack (= 6.0.2)
-      activesupport (= 6.0.2)
+    railties (6.0.3)
+      actionpack (= 6.0.3)
+      activesupport (= 6.0.3)
       method_source
       rake (>= 0.8.7)
       thor (>= 0.20.3, < 2.0)
     rainbow (3.0.0)
-    raindrops (0.19.0)
+    raindrops (0.19.1)
     rake (12.3.3)
     rb-fsevent (0.10.2)
     rb-inotify (0.9.10)
@@ -854,10 +849,10 @@ GEM
       msgpack (>= 0.4.3)
       optimist (>= 3.0.0)
     rdoc (6.1.2)
-    re2 (1.1.1)
+    re2 (1.2.0)
     recaptcha (4.13.1)
       json
-    recursive-open-struct (1.1.0)
+    recursive-open-struct (1.1.1)
     redis (4.1.3)
     redis-actionpack (5.2.0)
       actionpack (>= 5, < 7)
@@ -883,7 +878,8 @@ GEM
       declarative (< 0.1.0)
       declarative-option (< 0.2.0)
       uber (< 0.2.0)
-    request_store (1.3.1)
+    request_store (1.5.0)
+      rack (>= 1.4)
     responders (3.0.0)
       actionpack (>= 5.0)
       railties (>= 5.0)
@@ -894,7 +890,7 @@ GEM
     retriable (3.1.2)
     rinku (2.0.0)
     rotp (2.1.2)
-    rouge (3.18.0)
+    rouge (3.19.0)
     rqrcode (0.7.0)
       chunky_png
     rqrcode-rails3 (0.1.7)
@@ -905,7 +901,7 @@ GEM
       rspec-mocks (~> 3.9.0)
     rspec-core (3.9.1)
       rspec-support (~> 3.9.1)
-    rspec-expectations (3.9.0)
+    rspec-expectations (3.9.1)
       diff-lcs (>= 1.2.0, < 2.0)
       rspec-support (~> 3.9.0)
     rspec-mocks (3.9.1)
@@ -917,7 +913,7 @@ GEM
       proc_to_ast
       rspec (>= 2.13, < 4)
       unparser
-    rspec-rails (4.0.0.beta4)
+    rspec-rails (4.0.0)
       actionpack (>= 4.2)
       activesupport (>= 4.2)
       railties (>= 4.2)
@@ -1077,7 +1073,7 @@ GEM
     truncato (0.7.11)
       htmlentities (~> 4.3.1)
       nokogiri (>= 1.7.0, <= 2.0)
-    tzinfo (1.2.6)
+    tzinfo (1.2.7)
       thread_safe (~> 0.1)
     u2f (0.2.1)
     uber (0.1.0)
@@ -1091,7 +1087,7 @@ GEM
     unicode_plot (0.0.4)
       enumerable-statistics (>= 2.0.1)
     unicode_utils (1.4.0)
-    unicorn (5.4.1)
+    unicorn (5.5.5)
       kgio (~> 2.6)
       raindrops (~> 0.7)
     unicorn-worker-killer (0.4.4)
@@ -1108,6 +1104,9 @@ GEM
       equalizer (~> 0.0.9)
       parser (>= 2.6.5)
       procto (~> 0.0.2)
+    valid_email (0.1.3)
+      activemodel
+      mail (>= 2.6.1)
     validate_email (0.1.6)
       activemodel (>= 3.0)
       mail (>= 2.2.5)
@@ -1146,7 +1145,7 @@ GEM
     xml-simple (1.1.5)
     xpath (3.2.0)
       nokogiri (~> 1.8)
-    zeitwerk (2.2.2)
+    zeitwerk (2.3.0)
 
 PLATFORMS
   ruby
@@ -1163,7 +1162,7 @@ DEPENDENCIES
   asana (~> 0.9)
   asciidoctor (~> 2.0.10)
   asciidoctor-include-ext (~> 0.3.1)
-  asciidoctor-plantuml (= 0.0.10)
+  asciidoctor-plantuml (~> 0.0.12)
   atlassian-jwt (~> 0.2.0)
   attr_encrypted (~> 3.1.0)
   awesome_print
@@ -1202,7 +1201,7 @@ DEPENDENCIES
   diff_match_patch (~> 0.1.0)
   diffy (~> 3.3)
   discordrb-webhooks-blackst0ne (~> 3.3)
-  doorkeeper (~> 5.0.2)
+  doorkeeper (~> 5.0.3)
   doorkeeper-openid_connect (~> 1.6.3)
   ed25519 (~> 1.2)
   elasticsearch-api (~> 6.8)
@@ -1235,13 +1234,13 @@ DEPENDENCIES
   gettext (~> 3.2.2)
   gettext_i18n_rails (~> 1.8.0)
   gettext_i18n_rails_js (~> 1.3)
-  gitaly (~> 12.9.0.pre.rc4)
+  gitaly (~> 13.0.0.pre.rc1)
   github-markup (~> 1.7.0)
   gitlab-chronic (~> 0.10.5)
   gitlab-labkit (= 0.12.0)
   gitlab-license (~> 1.0)
-  gitlab-mail_room (~> 0.0.3)
-  gitlab-markup (~> 1.7.0)
+  gitlab-mail_room (~> 0.0.4)
+  gitlab-markup (~> 1.7.1)
   gitlab-net-dns (~> 0.9.1)
   gitlab-puma (~> 4.3.3.gitlab.2)
   gitlab-puma_worker_killer (~> 0.1.1.gitlab.1)
@@ -1273,10 +1272,10 @@ DEPENDENCIES
   html2text
   httparty (~> 0.16.4)
   icalendar
-  influxdb (~> 0.2)
   invisible_captcha (~> 0.12.1)
-  jira-ruby (~> 1.7)
+  jira-ruby (~> 2.0.0)
   js_regex (~> 3.1)
+  json (~> 2.3.0)
   json-schema (~> 2.8.0)
   jwt (~> 2.1.0)
   kaminari (~> 1.0)
@@ -1285,7 +1284,6 @@ DEPENDENCIES
   letter_opener_web (~> 1.3.4)
   license_finder (~> 5.4)
   licensee (~> 8.9)
-  liquid (~> 4.0)
   lockbox (~> 0.3.3)
   lograge (~> 0.5)
   loofah (~> 2.2)
@@ -1300,8 +1298,8 @@ DEPENDENCIES
   nakayoshi_fork (~> 0.0.4)
   net-ldap
   net-ntp
-  net-ssh (~> 5.2)
-  nokogiri (~> 1.10.5)
+  net-ssh (~> 6.0)
+  nokogiri (~> 1.10.9)
   oauth2 (~> 1.4)
   octokit (~> 4.15)
   omniauth (~> 1.8)
@@ -1332,12 +1330,12 @@ DEPENDENCIES
   pry-byebug (~> 3.5.1)
   pry-rails (~> 0.3.9)
   rack (~> 2.0.9)
-  rack-attack (~> 6.2.0)
+  rack-attack (~> 6.3.0)
   rack-cors (~> 1.0.6)
   rack-oauth2 (~> 1.9.3)
   rack-proxy (~> 0.6.0)
   rack-timeout
-  rails (= 6.0.2)
+  rails (~> 6.0.3)
   rails-controller-testing
   rails-i18n (~> 6.0)
   rainbow (~> 3.0)
@@ -1345,18 +1343,18 @@ DEPENDENCIES
   rblineprof (~> 0.3.6)
   rbtrace (~> 0.4)
   rdoc (~> 6.1.2)
-  re2 (~> 1.1.1)
+  re2 (~> 1.2.0)
   recaptcha (~> 4.11)
   redis (~> 4.0)
   redis-namespace (~> 1.6.0)
   redis-rails (~> 5.0.2)
-  request_store (~> 1.3)
+  request_store (~> 1.5)
   responders (~> 3.0)
   retriable (~> 3.1.2)
-  rouge (~> 3.18.0)
+  rouge (~> 3.19.0)
   rqrcode-rails3 (~> 0.1.7)
   rspec-parameterized
-  rspec-rails (~> 4.0.0.beta4)
+  rspec-rails (~> 4.0.0)
   rspec-retry (~> 0.6.1)
   rspec_junit_formatter
   rspec_profiling (~> 0.0.5)
@@ -1398,9 +1396,10 @@ DEPENDENCIES
   u2f (~> 0.2.1)
   uglifier (~> 2.7.2)
   unf (~> 0.1.4)
-  unicorn (~> 5.4.1)
+  unicorn (~> 5.5)
   unicorn-worker-killer (~> 0.4.4)
   unleash (~> 0.1.5)
+  valid_email (~> 0.1)
   validates_hostname (~> 1.0.6)
   version_sorter (~> 2.2.4)
   vmstat (~> 2.3.0)
diff --git a/pkgs/applications/version-management/gitlab/rubyEnv/gemset.nix b/pkgs/applications/version-management/gitlab/rubyEnv/gemset.nix
index 2544cd0ac898..041f19226f46 100644
--- a/pkgs/applications/version-management/gitlab/rubyEnv/gemset.nix
+++ b/pkgs/applications/version-management/gitlab/rubyEnv/gemset.nix
@@ -36,10 +36,10 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "0dngxp5r9ww4xgryn458ngq2h3ylx7d6d258wcfqhibpyjr7qvpj";
+      sha256 = "0lvbyv15j3g3xhywr8jdgv5rjn26mz7430886njjfrd12x812szy";
       type = "gem";
     };
-    version = "6.0.2";
+    version = "6.0.3";
   };
   actionmailbox = {
     dependencies = ["actionpack" "activejob" "activerecord" "activestorage" "activesupport" "mail"];
@@ -47,10 +47,10 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "11wpcjc806y82p1nn3ly9savcdqcf4b0qml5ri5bmd6r2g802s2z";
+      sha256 = "1nwvx83lha87052jywaiqq284nabp3h5lfq7vrb01myh6cr3ggaq";
       type = "gem";
     };
-    version = "6.0.2";
+    version = "6.0.3";
   };
   actionmailer = {
     dependencies = ["actionpack" "actionview" "activejob" "mail" "rails-dom-testing"];
@@ -58,10 +58,10 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "0ych434bbim8n65png7hg35xfgmpv0qxvkngpvrr3qgj7l1xgdi5";
+      sha256 = "16d40j1hcak5p9185dbb015difw12m5f3wjfbh4mw9w8agqsc8mr";
       type = "gem";
     };
-    version = "6.0.2";
+    version = "6.0.3";
   };
   actionpack = {
     dependencies = ["actionview" "activesupport" "rack" "rack-test" "rails-dom-testing" "rails-html-sanitizer"];
@@ -69,10 +69,10 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "0zg96vjjw1kbli6nk6cyk64zfh4lgpl7fqx38ncbgfacl4dq7y0b";
+      sha256 = "1v885hs35r8217py08z5k1wvgfzfml64g9wf5v3djgh8mhlf5nfn";
       type = "gem";
     };
-    version = "6.0.2";
+    version = "6.0.3";
   };
   actiontext = {
     dependencies = ["actionpack" "activerecord" "activestorage" "activesupport" "nokogiri"];
@@ -80,10 +80,10 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "1acw3yypd4w35ra87d0kzwwcwj3hps6j0g108rnxy7pscvzajw8q";
+      sha256 = "00w8a5vxs1rlbn0innhrwhjjavmgx0scnkz8h7k83df9l1s7f70j";
       type = "gem";
     };
-    version = "6.0.2";
+    version = "6.0.3";
   };
   actionview = {
     dependencies = ["activesupport" "builder" "erubi" "rails-dom-testing" "rails-html-sanitizer"];
@@ -91,10 +91,10 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "1bfh9z3n98c76c6jdp6avh75wsckxyp74r59hmgnqdhfznbkppv4";
+      sha256 = "0s6fr50l714rvzr9vavg1ckgx5xjj5zz7dca42xxjp4jkr7jva7q";
       type = "gem";
     };
-    version = "6.0.2";
+    version = "6.0.3";
   };
   activejob = {
     dependencies = ["activesupport" "globalid"];
@@ -102,10 +102,10 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "0bhf4lxnrmz73zshl5rzvw65x3kd18yligf11lcg7ik9b2i9j6pi";
+      sha256 = "1qr5p1sijan8k2m39w602s1mn3bwwsl7jm14drsgdhvdx5ilwg7b";
       type = "gem";
     };
-    version = "6.0.2";
+    version = "6.0.3";
   };
   activemodel = {
     dependencies = ["activesupport"];
@@ -113,10 +113,10 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "09p7si419x0fb5cw8cbfmzplyk2bdrx0m5cy9pwja89rnhp8yhl0";
+      sha256 = "0pi9waxcvb8gxwp4i4wmxszyqhr28gn9jzbq1ivy84g1q658lmqz";
       type = "gem";
     };
-    version = "6.0.2";
+    version = "6.0.3";
   };
   activerecord = {
     dependencies = ["activemodel" "activesupport"];
@@ -124,10 +124,10 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "1w60vnkg88frbpsixfm9immh211pbqg9dwm0gqrr17kdjd00r5z4";
+      sha256 = "1wkm8741i00l5cq88wl9nr131wh955x4cjg2q2d60m3qhpqbxirv";
       type = "gem";
     };
-    version = "6.0.2";
+    version = "6.0.3";
   };
   activerecord-explain-analyze = {
     dependencies = ["activerecord" "pg"];
@@ -146,10 +146,10 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "0qsjhyrjcklqf7dqw6yjvmbfd8yhqyz0dy9apmpd0swiwxnn8kds";
+      sha256 = "1yy832p0q7gxp1vbncb677y35y112d2f6mvf131n0m2w35ig9m4f";
       type = "gem";
     };
-    version = "6.0.2";
+    version = "6.0.3";
   };
   activesupport = {
     dependencies = ["concurrent-ruby" "i18n" "minitest" "tzinfo" "zeitwerk"];
@@ -157,10 +157,10 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "1brlp5pmawb2hqdybjb732zxxkamcmis6px3wyh09rjlc0gqnzzz";
+      sha256 = "0shh34xx9ygxb57s8mag8l22klvjfnk1c4jbjvchk16r6z0ps326";
       type = "gem";
     };
-    version = "6.0.2";
+    version = "6.0.3";
   };
   acts-as-taggable-on = {
     dependencies = ["activerecord"];
@@ -264,10 +264,10 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "1bnrz4ywaq7vaw66fy3kkbwf07fvyqwngm3vb83s9h5zvr4n593b";
+      sha256 = "02knhmyd3h1yryn66xjfciz7jjsq676kl7ama0r0cf92vyyvm12x";
       type = "gem";
     };
-    version = "0.0.10";
+    version = "0.0.12";
   };
   ast = {
     groups = ["default" "development" "test"];
@@ -620,16 +620,6 @@
     };
     version = "1.3.1";
   };
-  cause = {
-    groups = ["default" "metrics"];
-    platforms = [];
-    source = {
-      remotes = ["https://rubygems.org"];
-      sha256 = "0digirxqlwdg79mkbn70yc7i9i1qnclm2wjbrc47kqv6236bpj00";
-      type = "gem";
-    };
-    version = "0.1";
-  };
   character_set = {
     groups = ["default"];
     platforms = [];
@@ -1071,10 +1061,10 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "0488m6nwp31mxrhayj60gsb7jgyw1lzh73r2kldx00a9bw3634d4";
+      sha256 = "0w554smil33j64h50w29xavgg4k7172r0c2rrygfbp5p4ap9py9c";
       type = "gem";
     };
-    version = "5.0.2";
+    version = "5.0.3";
   };
   doorkeeper-openid_connect = {
     dependencies = ["doorkeeper" "json-jwt"];
@@ -1678,10 +1668,10 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "19aqxxgq8d9jqvzz36jciqb54nrb8w2b85abpy98cq7ldj1lh497";
+      sha256 = "01ki2isvqyhfw503z3ahksbfb0s0m3psi4din9azdpgcqyv1pxlh";
       type = "gem";
     };
-    version = "12.9.0.pre.rc4";
+    version = "13.0.0.pre.rc1";
   };
   github-markup = {
     groups = ["default"];
@@ -1730,20 +1720,20 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "0q4z5p8hxyzrwr93r4mqr794fvqppi7ijcnp5nw9m4vd076hp4vh";
+      sha256 = "10ajr3l8vasy4zkc0p481m806g7k7idnw7mi6rlkmx4gkgb0z46j";
       type = "gem";
     };
-    version = "0.0.3";
+    version = "0.0.4";
   };
   gitlab-markup = {
     groups = ["default"];
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "0rqf3jmyn78r3ysy3bjyx7s4yv3xipxlmqlmbyrbksna19rrx08d";
+      sha256 = "0xnlra517pfj3hx07kasbqlcw51ix4xajr6bsd3mwg8bc92dlwy7";
       type = "gem";
     };
-    version = "1.7.0";
+    version = "1.7.1";
   };
   gitlab-net-dns = {
     groups = ["default"];
@@ -2270,17 +2260,6 @@
     };
     version = "0.11.2";
   };
-  influxdb = {
-    dependencies = ["cause" "json"];
-    groups = ["metrics"];
-    platforms = [];
-    source = {
-      remotes = ["https://rubygems.org"];
-      sha256 = "1vhg5nd88nwvfa76lqcczld916nljswwq6clsixrzi3js8ym9y1w";
-      type = "gem";
-    };
-    version = "0.2.3";
-  };
   invisible_captcha = {
     dependencies = ["rails"];
     groups = ["default"];
@@ -2329,10 +2308,10 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "0hb3645x0p3bkmqcgc9b2q4b5kn02wgmb03brx7ag1h5y79an4q5";
+      sha256 = "1bfqb5qkgbcjrspspa2lha2is0anjnby20x9gp7bfjr5j5j9my32";
       type = "gem";
     };
-    version = "1.7.1";
+    version = "2.0.0";
   };
   jmespath = {
     groups = ["default"];
@@ -2356,14 +2335,14 @@
     version = "3.1.1";
   };
   json = {
-    groups = ["default" "development" "metrics" "test"];
+    groups = ["default"];
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "0qmj7fypgb9vag723w1a49qihxrcf5shzars106ynw2zk352gbv5";
+      sha256 = "0nrmw2r4nfxlfgprfgki3hjifgrcrs3l5zvm3ca3gb4743yr25mn";
       type = "gem";
     };
-    version = "1.8.6";
+    version = "2.3.0";
   };
   json-jwt = {
     dependencies = ["activesupport" "aes_key_wrap" "bindata"];
@@ -2445,10 +2424,10 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "1528pyj1szzzp3pgj05fzjd36qjrxm9yj2x5radc9p1z7vl67y50";
+      sha256 = "0ai6bzlvxbzpdl466p1qi4dlhx8ri2wcrp6x1l19y3yfs3a29rng";
       type = "gem";
     };
-    version = "2.11.2";
+    version = "2.11.3";
   };
   knapsack = {
     dependencies = ["rake"];
@@ -2548,16 +2527,6 @@
     };
     version = "8.9.2";
   };
-  liquid = {
-    groups = ["default"];
-    platforms = [];
-    source = {
-      remotes = ["https://rubygems.org"];
-      sha256 = "0zhg5ha8zy8zw9qr3fl4wgk4r5940n4128xm2pn4shpbzdbsj5by";
-      type = "gem";
-    };
-    version = "4.0.3";
-  };
   listen = {
     dependencies = ["rb-fsevent" "rb-inotify" "ruby_dep"];
     groups = ["default" "test"];
@@ -2606,10 +2575,10 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "1g7ps9m3s14cajhxrfgbzahv9i3gy47s4hqrv3mpybpj5cyr0srn";
+      sha256 = "0jk9fgn5ayzbqvzqm11gbkqvas77zdbpkvynlylyiwynclgrn040";
       type = "gem";
     };
-    version = "2.4.0";
+    version = "2.5.0";
   };
   lru_redux = {
     groups = ["default"];
@@ -2735,10 +2704,10 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "04cp5sfbh1qx82yqxn0q75c7hlcx8y1dr5g3kyzwm4mx6wi2gifw";
+      sha256 = "1qfqb9w76kmpb48frbzbyvjc0dfxh5qiw1kxdbv2y2kp6fxpa1kf";
       type = "gem";
     };
-    version = "0.3.3";
+    version = "0.3.5";
   };
   mini_histogram = {
     groups = ["default"];
@@ -2916,10 +2885,10 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "101wd2px9lady54aqmkibvy4j62zk32w0rjz4vnigyg974fsga40";
+      sha256 = "1l0kgd7w08fx2522aw8grlfzwmrgw4jgjakpkgkwm0134g5xv432";
       type = "gem";
     };
-    version = "5.2.0";
+    version = "6.0.0";
   };
   netrc = {
     groups = ["default"];
@@ -2957,10 +2926,10 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "1yi8j8hwrlc3rg5v3w52gxndmwifyk7m732q9yfbal0qajqbh1h8";
+      sha256 = "12j76d0bp608932xkzmfi638c7aqah57l437q8494znzbj610qnm";
       type = "gem";
     };
-    version = "1.10.8";
+    version = "1.10.9";
   };
   nokogumbo = {
     dependencies = ["nokogiri"];
@@ -3553,10 +3522,10 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "1sqjqwa18c0l59zdymcvvvnh5nk3pjggnzaydb2q1qbrk3rypcnq";
+      sha256 = "15b8lk54j2abqhpn588b1wvbzwmxwa7iql6241kxpjc0gyb51p0z";
       type = "gem";
     };
-    version = "6.2.0";
+    version = "6.3.0";
   };
   rack-cors = {
     dependencies = ["rack"];
@@ -3629,10 +3598,10 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "02sxw1f3n2ydmhacakmgjjwv84vqplgr1888cv5dyflb11a3f8mm";
+      sha256 = "1rvkzj2hn1rlxc0ndn742mgbdpq0l38i6pjhhwgpaq519jpkk41r";
       type = "gem";
     };
-    version = "6.0.2";
+    version = "6.0.3";
   };
   rails-controller-testing = {
     dependencies = ["actionpack" "actionview" "activesupport"];
@@ -3684,10 +3653,10 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "0lpzw7bwvg42x6mwfv7d3bhcnyy8p7rcd8yy8cj5qq5mjznhawca";
+      sha256 = "01h2ifvvmlzmq8dmpqkhrrmj704v79r1vkcrnvmrqhf4a9bbyqsi";
       type = "gem";
     };
-    version = "6.0.2";
+    version = "6.0.3";
   };
   rainbow = {
     groups = ["default" "development" "test"];
@@ -3704,10 +3673,10 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "1qpbd9jif40c53fz2r0l8khfl016y8s8bkx37ibcaafclbl3xygp";
+      sha256 = "0zjja00mzgx2lddb7qrn14k7qrnwhf4bpmnlqj78m1pfxh7svync";
       type = "gem";
     };
-    version = "0.19.0";
+    version = "0.19.1";
   };
   rake = {
     groups = ["default" "development" "test"];
@@ -3781,10 +3750,10 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "00wf9k1hkv3z3nfkrnfyyfq9ah0l7k14awqys3h2hqz4c21pqd2i";
+      sha256 = "16q71cc9wx342c697q18pkz19ym4ncjd97hcw4v6f1mgflkdv400";
       type = "gem";
     };
-    version = "1.1.1";
+    version = "1.2.0";
   };
   recaptcha = {
     dependencies = ["json"];
@@ -3802,10 +3771,10 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "0wfcyigmf5mwrxy76p0bi4sdb4h9afs8jc73pjav5cnqszljjl3c";
+      sha256 = "0acrxff186sn6sxdfiy7nacjgwak5cqd7jha9v3kshpf3sfr7qd1";
       type = "gem";
     };
-    version = "1.1.0";
+    version = "1.1.1";
   };
   RedCloth = {
     groups = ["default"];
@@ -3925,14 +3894,15 @@
     version = "3.0.4";
   };
   request_store = {
+    dependencies = ["rack"];
     groups = ["default"];
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "1va9x0b3ww4chcfqlmi8b14db39di1mwa7qrjbh7ma0lhndvs2zv";
+      sha256 = "0cx74kispmnw3ljwb239j65a2j14n8jlsygy372hrsa8mxc71hxi";
       type = "gem";
     };
-    version = "1.3.1";
+    version = "1.5.0";
   };
   responders = {
     dependencies = ["actionpack" "railties"];
@@ -3991,10 +3961,10 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "1n9h0ls2a2zq0bcsw31wxci1wdxb8s3vglfadxpcs6b04vkf6nqq";
+      sha256 = "102rc07d78k5bkl0s9nd1gw6wz0w0zcvg4g5sl7z9xxi4r793c35";
       type = "gem";
     };
-    version = "3.18.0";
+    version = "3.19.0";
   };
   rqrcode = {
     dependencies = ["chunky_png"];
@@ -4046,10 +4016,10 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "1gjqfb39da6gywdcp4h77738r7khbrn2v4y45589z25bj4z9paf0";
+      sha256 = "0fjbwvq7qaz6h3sh1bs9q2qiy4zwcrc8f7xwv82dx2bc09dmqzhd";
       type = "gem";
     };
-    version = "3.9.0";
+    version = "3.9.1";
   };
   rspec-mocks = {
     dependencies = ["diff-lcs" "rspec-support"];
@@ -4079,10 +4049,10 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "0p2ji21avixi0sf9xlgrdz319kvs4pjhlbz7kj4anmx5s25w1x7j";
+      sha256 = "01cyd449g4lsgrlck7nn3ynn8c8vwfhjb913y05wil56y77wsfkl";
       type = "gem";
     };
-    version = "4.0.0.beta4";
+    version = "4.0.0";
   };
   rspec-retry = {
     dependencies = ["rspec-core"];
@@ -4851,10 +4821,10 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "04f18jdv6z3zn3va50rqq35nj3izjpb72fnf21ixm7vanq6nc4fp";
+      sha256 = "1i3jh086w1kbdj3k5l60lc3nwbanmzdf8yjj3mlrx9b2gjjxhi9r";
       type = "gem";
     };
-    version = "1.2.6";
+    version = "1.2.7";
   };
   u2f = {
     groups = ["default"];
@@ -4945,10 +4915,10 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "1qfhvzs4i6ja1s43j8p1kfbzm10n7a02ngki30a38y5m46a2qrak";
+      sha256 = "1cznkq0agsm7s66nbqbalmq5nlc5cdpd2h88r8jdzsc7wsi5a098";
       type = "gem";
     };
-    version = "5.4.1";
+    version = "5.5.5";
   };
   unicorn-worker-killer = {
     dependencies = ["get_process_mem" "unicorn"];
@@ -4993,6 +4963,17 @@
     };
     version = "0.4.7";
   };
+  valid_email = {
+    dependencies = ["activemodel" "mail"];
+    groups = ["default"];
+    platforms = [];
+    source = {
+      remotes = ["https://rubygems.org"];
+      sha256 = "0w3587sa7d1a51djyla57pbv9v105jsqvxhkg6vbxi343fsm455q";
+      type = "gem";
+    };
+    version = "0.1.3";
+  };
   validate_email = {
     dependencies = ["activemodel" "mail"];
     groups = ["default"];
@@ -5169,9 +5150,9 @@
     platforms = [];
     source = {
       remotes = ["https://rubygems.org"];
-      sha256 = "0jywi63w1m2b2w9fj9rjb9n3imf6p5bfijfmml1xzdnsrdrjz0x1";
+      sha256 = "1akpm3pwvyiack2zk6giv9yn3cqb8pw6g40p4394pdc3xmy3s4k0";
       type = "gem";
     };
-    version = "2.2.2";
+    version = "2.3.0";
   };
 }
\ No newline at end of file
diff --git a/pkgs/applications/version-management/gitlab/yarnPkgs.nix b/pkgs/applications/version-management/gitlab/yarnPkgs.nix
index f85ee249029f..f7851c6adcb4 100644
--- a/pkgs/applications/version-management/gitlab/yarnPkgs.nix
+++ b/pkgs/applications/version-management/gitlab/yarnPkgs.nix
@@ -698,27 +698,27 @@
       };
     }
     {
-      name = "_gitlab_eslint_plugin___eslint_plugin_2.2.1.tgz";
+      name = "_gitlab_eslint_plugin___eslint_plugin_3.1.0.tgz";
       path = fetchurl {
-        name = "_gitlab_eslint_plugin___eslint_plugin_2.2.1.tgz";
-        url  = "https://registry.yarnpkg.com/@gitlab/eslint-plugin/-/eslint-plugin-2.2.1.tgz";
-        sha1 = "7033030787981ded5ae24f4051109d069c98fcc0";
+        name = "_gitlab_eslint_plugin___eslint_plugin_3.1.0.tgz";
+        url  = "https://registry.yarnpkg.com/@gitlab/eslint-plugin/-/eslint-plugin-3.1.0.tgz";
+        sha1 = "18e03630d10788defbb4c2d746620aec09517295";
       };
     }
     {
-      name = "_gitlab_svgs___svgs_1.121.0.tgz";
+      name = "_gitlab_svgs___svgs_1.127.0.tgz";
       path = fetchurl {
-        name = "_gitlab_svgs___svgs_1.121.0.tgz";
-        url  = "https://registry.yarnpkg.com/@gitlab/svgs/-/svgs-1.121.0.tgz";
-        sha1 = "77083a68f72e9aa0e294da7715f378eef13b839e";
+        name = "_gitlab_svgs___svgs_1.127.0.tgz";
+        url  = "https://registry.yarnpkg.com/@gitlab/svgs/-/svgs-1.127.0.tgz";
+        sha1 = "1f7ffdffe44d6a82b372535f93d78f3a895d1960";
       };
     }
     {
-      name = "_gitlab_ui___ui_12.1.0.tgz";
+      name = "_gitlab_ui___ui_14.10.0.tgz";
       path = fetchurl {
-        name = "_gitlab_ui___ui_12.1.0.tgz";
-        url  = "https://registry.yarnpkg.com/@gitlab/ui/-/ui-12.1.0.tgz";
-        sha1 = "b97c7898410767c85cf1768f9b9e36329e59a7ec";
+        name = "_gitlab_ui___ui_14.10.0.tgz";
+        url  = "https://registry.yarnpkg.com/@gitlab/ui/-/ui-14.10.0.tgz";
+        sha1 = "39c04d62c914fcefe96c7ec32fdf31b1f98f1119";
       };
     }
     {
@@ -841,6 +841,14 @@
         sha1 = "11d8944dcf2d526e31660bb69570be03f8fb72b7";
       };
     }
+    {
+      name = "_rails_actioncable___actioncable_6.0.3.tgz";
+      path = fetchurl {
+        name = "_rails_actioncable___actioncable_6.0.3.tgz";
+        url  = "https://registry.yarnpkg.com/@rails/actioncable/-/actioncable-6.0.3.tgz";
+        sha1 = "722b4b639936129307ddbab3a390f6bcacf3e7bc";
+      };
+    }
     {
       name = "_sentry_browser___browser_5.10.2.tgz";
       path = fetchurl {
@@ -890,11 +898,27 @@
       };
     }
     {
-      name = "_sourcegraph_code_host_integration___code_host_integration_0.0.36.tgz";
+      name = "_sourcegraph_code_host_integration___code_host_integration_0.0.46.tgz";
       path = fetchurl {
-        name = "_sourcegraph_code_host_integration___code_host_integration_0.0.36.tgz";
-        url  = "https://registry.yarnpkg.com/@sourcegraph/code-host-integration/-/code-host-integration-0.0.36.tgz";
-        sha1 = "2f4d287840ac2944c78ef92f10f0db0ef8a077fa";
+        name = "_sourcegraph_code_host_integration___code_host_integration_0.0.46.tgz";
+        url  = "https://registry.yarnpkg.com/@sourcegraph/code-host-integration/-/code-host-integration-0.0.46.tgz";
+        sha1 = "05e4cda671ed00450be12461e6a3caff473675aa";
+      };
+    }
+    {
+      name = "_toast_ui_editor___editor_2.0.1.tgz";
+      path = fetchurl {
+        name = "_toast_ui_editor___editor_2.0.1.tgz";
+        url  = "https://registry.yarnpkg.com/@toast-ui/editor/-/editor-2.0.1.tgz";
+        sha1 = "749e5be1f02f42ded51488d1575ab1c19ca59952";
+      };
+    }
+    {
+      name = "_toast_ui_vue_editor___vue_editor_2.0.1.tgz";
+      path = fetchurl {
+        name = "_toast_ui_vue_editor___vue_editor_2.0.1.tgz";
+        url  = "https://registry.yarnpkg.com/@toast-ui/vue-editor/-/vue-editor-2.0.1.tgz";
+        sha1 = "c9c8c8da4c0a67b9fbc4240464388c67d72a0c22";
       };
     }
     {
@@ -937,6 +961,22 @@
         sha1 = "328dd1a8fc4cfe3c8458be9477b219ea158fd7b2";
       };
     }
+    {
+      name = "_types_codemirror___codemirror_0.0.71.tgz";
+      path = fetchurl {
+        name = "_types_codemirror___codemirror_0.0.71.tgz";
+        url  = "https://registry.yarnpkg.com/@types/codemirror/-/codemirror-0.0.71.tgz";
+        sha1 = "861f1bcb3100c0a064567c5400f2981cf4ae8ca7";
+      };
+    }
+    {
+      name = "_types_estree___estree_0.0.44.tgz";
+      path = fetchurl {
+        name = "_types_estree___estree_0.0.44.tgz";
+        url  = "https://registry.yarnpkg.com/@types/estree/-/estree-0.0.44.tgz";
+        sha1 = "980cc5a29a3ef3bea6ff1f7d021047d7ea575e21";
+      };
+    }
     {
       name = "_types_events___events_1.2.0.tgz";
       path = fetchurl {
@@ -977,6 +1017,14 @@
         sha1 = "7a8cbf6a406f36c8add871625b278eaf0b0d255a";
       };
     }
+    {
+      name = "_types_json_schema___json_schema_7.0.4.tgz";
+      path = fetchurl {
+        name = "_types_json_schema___json_schema_7.0.4.tgz";
+        url  = "https://registry.yarnpkg.com/@types/json-schema/-/json-schema-7.0.4.tgz";
+        sha1 = "38fd73ddfd9b55abb1e1b2ed578cb55bd7b7d339";
+      };
+    }
     {
       name = "_types_minimatch___minimatch_3.0.3.tgz";
       path = fetchurl {
@@ -1017,6 +1065,14 @@
         sha1 = "b4ffc7dc97b498c969b360a41eee247f82616370";
       };
     }
+    {
+      name = "_types_tern___tern_0.23.3.tgz";
+      path = fetchurl {
+        name = "_types_tern___tern_0.23.3.tgz";
+        url  = "https://registry.yarnpkg.com/@types/tern/-/tern-0.23.3.tgz";
+        sha1 = "4b54538f04a88c9ff79de1f6f94f575a7f339460";
+      };
+    }
     {
       name = "_types_uglify_js___uglify_js_3.0.4.tgz";
       path = fetchurl {
@@ -1073,6 +1129,22 @@
         sha1 = "8b63ab7f1aa5321248aad5ac890a485656dcea4d";
       };
     }
+    {
+      name = "_typescript_eslint_experimental_utils___experimental_utils_2.30.0.tgz";
+      path = fetchurl {
+        name = "_typescript_eslint_experimental_utils___experimental_utils_2.30.0.tgz";
+        url  = "https://registry.yarnpkg.com/@typescript-eslint/experimental-utils/-/experimental-utils-2.30.0.tgz";
+        sha1 = "9845e868c01f3aed66472c561d4b6bac44809dd0";
+      };
+    }
+    {
+      name = "_typescript_eslint_typescript_estree___typescript_estree_2.30.0.tgz";
+      path = fetchurl {
+        name = "_typescript_eslint_typescript_estree___typescript_estree_2.30.0.tgz";
+        url  = "https://registry.yarnpkg.com/@typescript-eslint/typescript-estree/-/typescript-estree-2.30.0.tgz";
+        sha1 = "1b8e848b55144270255ffbfe4c63291f8f766615";
+      };
+    }
     {
       name = "_vue_component_compiler_utils___component_compiler_utils_2.6.0.tgz";
       path = fetchurl {
@@ -1873,14 +1945,6 @@
         sha1 = "8e09bff3d9122e133f7b8101c8fbdd00ed3d2ab8";
       };
     }
-    {
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-      path = fetchurl {
-        name = "babel_code_frame___babel_code_frame_6.26.0.tgz";
-        url  = "https://registry.yarnpkg.com/babel-code-frame/-/babel-code-frame-6.26.0.tgz";
-        sha1 = "63fd43f7dc1e3bb7ce35947db8fe369a3f58c74b";
-      };
-    }
     {
       name = "babel_eslint___babel_eslint_10.0.3.tgz";
       path = fetchurl {
@@ -2793,6 +2857,14 @@
         sha1 = "0d070b4d043a5bea33a2f1a40e2edb3d9a4ccf77";
       };
     }
+    {
+      name = "codemirror___codemirror_5.53.2.tgz";
+      path = fetchurl {
+        name = "codemirror___codemirror_5.53.2.tgz";
+        url  = "https://registry.yarnpkg.com/codemirror/-/codemirror-5.53.2.tgz";
+        sha1 = "9799121cf8c50809cca487304e9de3a74d33f428";
+      };
+    }
     {
       name = "codesandbox_api___codesandbox_api_0.0.23.tgz";
       path = fetchurl {
@@ -3290,11 +3362,11 @@
       };
     }
     {
-      name = "css_loader___css_loader_1.0.1.tgz";
+      name = "css_loader___css_loader_2.1.1.tgz";
       path = fetchurl {
-        name = "css_loader___css_loader_1.0.1.tgz";
-        url  = "https://registry.yarnpkg.com/css-loader/-/css-loader-1.0.1.tgz";
-        sha1 = "6885bb5233b35ec47b006057da01cc640b6b79fe";
+        name = "css_loader___css_loader_2.1.1.tgz";
+        url  = "https://registry.yarnpkg.com/css-loader/-/css-loader-2.1.1.tgz";
+        sha1 = "d8254f72e412bb2238bb44dd674ffbef497333ea";
       };
     }
     {
@@ -3305,14 +3377,6 @@
         sha1 = "5f1ad43e2d8eefbfdc304fcd39a521664943e3eb";
       };
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-    {
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-      path = fetchurl {
-        name = "css_selector_tokenizer___css_selector_tokenizer_0.7.2.tgz";
-        url  = "https://registry.yarnpkg.com/css-selector-tokenizer/-/css-selector-tokenizer-0.7.2.tgz";
-        sha1 = "11e5e27c9a48d90284f22d45061c303d7a25ad87";
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-    }
     {
       name = "css___css_2.2.4.tgz";
       path = fetchurl {
@@ -4514,11 +4578,11 @@
       };
     }
     {
-      name = "eslint_plugin_jest___eslint_plugin_jest_22.3.0.tgz";
+      name = "eslint_plugin_jest___eslint_plugin_jest_23.8.2.tgz";
       path = fetchurl {
-        name = "eslint_plugin_jest___eslint_plugin_jest_22.3.0.tgz";
-        url  = "https://registry.yarnpkg.com/eslint-plugin-jest/-/eslint-plugin-jest-22.3.0.tgz";
-        sha1 = "a10f10dedfc92def774ec9bb5bfbd2fb8e1c96d2";
+        name = "eslint_plugin_jest___eslint_plugin_jest_23.8.2.tgz";
+        url  = "https://registry.yarnpkg.com/eslint-plugin-jest/-/eslint-plugin-jest-23.8.2.tgz";
+        sha1 = "6f28b41c67ef635f803ebd9e168f6b73858eb8d4";
       };
     }
     {
@@ -4577,6 +4641,14 @@
         sha1 = "74fec7c54d0776b6f67e0251040b5806564e981f";
       };
     }
+    {
+      name = "eslint_utils___eslint_utils_2.0.0.tgz";
+      path = fetchurl {
+        name = "eslint_utils___eslint_utils_2.0.0.tgz";
+        url  = "https://registry.yarnpkg.com/eslint-utils/-/eslint-utils-2.0.0.tgz";
+        sha1 = "7be1cc70f27a72a76cd14aa698bcabed6890e1cd";
+      };
+    }
     {
       name = "eslint_visitor_keys___eslint_visitor_keys_1.1.0.tgz";
       path = fetchurl {
@@ -4881,14 +4953,6 @@
         sha1 = "3d8a5c66883a16a30ca8643e851f19baa7797917";
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-    {
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-      path = fetchurl {
-        name = "fastparse___fastparse_1.1.2.tgz";
-        url  = "https://registry.yarnpkg.com/fastparse/-/fastparse-1.1.2.tgz";
-        sha1 = "91728c5a5942eced8531283c79441ee4122c35a9";
-      };
-    }
     {
       name = "fault___fault_1.0.2.tgz";
       path = fetchurl {
@@ -5562,11 +5626,11 @@
       };
     }
     {
-      name = "graphql_tag___graphql_tag_2.10.0.tgz";
+      name = "graphql_tag___graphql_tag_2.10.3.tgz";
       path = fetchurl {
-        name = "graphql_tag___graphql_tag_2.10.0.tgz";
-        url  = "https://registry.yarnpkg.com/graphql-tag/-/graphql-tag-2.10.0.tgz";
-        sha1 = "87da024be863e357551b2b8700e496ee2d4353ae";
+        name = "graphql_tag___graphql_tag_2.10.3.tgz";
+        url  = "https://registry.yarnpkg.com/graphql-tag/-/graphql-tag-2.10.3.tgz";
+        sha1 = "ea1baba5eb8fc6339e4c4cf049dabe522b0edf03";
       };
     }
     {
@@ -5938,11 +6002,11 @@
       };
     }
     {
-      name = "icss_utils___icss_utils_2.1.0.tgz";
+      name = "icss_utils___icss_utils_4.1.1.tgz";
       path = fetchurl {
-        name = "icss_utils___icss_utils_2.1.0.tgz";
-        url  = "https://registry.yarnpkg.com/icss-utils/-/icss-utils-2.1.0.tgz";
-        sha1 = "83f0a0ec378bf3246178b6c2ad9136f135b1c962";
+        name = "icss_utils___icss_utils_4.1.1.tgz";
+        url  = "https://registry.yarnpkg.com/icss-utils/-/icss-utils-4.1.1.tgz";
+        sha1 = "21170b53789ee27447c2f47dd683081403f9a467";
       };
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     {
@@ -7201,14 +7265,6 @@
         sha1 = "19203fb59991df98e3a287050d4647cdeaf32499";
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-    {
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-      path = fetchurl {
-        name = "js_tokens___js_tokens_3.0.2.tgz";
-        url  = "https://registry.yarnpkg.com/js-tokens/-/js-tokens-3.0.2.tgz";
-        sha1 = "9866df395102130e38f7f996bceb65443209c25b";
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     {
       name = "js_yaml___js_yaml_3.13.1.tgz";
       path = fetchurl {
@@ -8345,6 +8401,14 @@
         sha1 = "ea0a3291f97e0b5e8776b363d5f0a12d94c67022";
       };
     }
+    {
+      name = "mitt___mitt_1.2.0.tgz";
+      path = fetchurl {
+        name = "mitt___mitt_1.2.0.tgz";
+        url  = "https://registry.yarnpkg.com/mitt/-/mitt-1.2.0.tgz";
+        sha1 = "cb24e6569c806e31bd4e3995787fe38a04fdf90d";
+      };
+    }
     {
       name = "mixin_deep___mixin_deep_1.3.2.tgz";
       path = fetchurl {
@@ -9546,35 +9610,35 @@
       };
     }
     {
-      name = "postcss_modules_extract_imports___postcss_modules_extract_imports_1.2.1.tgz";
+      name = "postcss_modules_extract_imports___postcss_modules_extract_imports_2.0.0.tgz";
       path = fetchurl {
-        name = "postcss_modules_extract_imports___postcss_modules_extract_imports_1.2.1.tgz";
-        url  = "https://registry.yarnpkg.com/postcss-modules-extract-imports/-/postcss-modules-extract-imports-1.2.1.tgz";
-        sha1 = "dc87e34148ec7eab5f791f7cd5849833375b741a";
+        name = "postcss_modules_extract_imports___postcss_modules_extract_imports_2.0.0.tgz";
+        url  = "https://registry.yarnpkg.com/postcss-modules-extract-imports/-/postcss-modules-extract-imports-2.0.0.tgz";
+        sha1 = "818719a1ae1da325f9832446b01136eeb493cd7e";
       };
     }
     {
-      name = "postcss_modules_local_by_default___postcss_modules_local_by_default_1.2.0.tgz";
+      name = "postcss_modules_local_by_default___postcss_modules_local_by_default_2.0.6.tgz";
       path = fetchurl {
-        name = "postcss_modules_local_by_default___postcss_modules_local_by_default_1.2.0.tgz";
-        url  = "https://registry.yarnpkg.com/postcss-modules-local-by-default/-/postcss-modules-local-by-default-1.2.0.tgz";
-        sha1 = "f7d80c398c5a393fa7964466bd19500a7d61c069";
+        name = "postcss_modules_local_by_default___postcss_modules_local_by_default_2.0.6.tgz";
+        url  = "https://registry.yarnpkg.com/postcss-modules-local-by-default/-/postcss-modules-local-by-default-2.0.6.tgz";
+        sha1 = "dd9953f6dd476b5fd1ef2d8830c8929760b56e63";
       };
     }
     {
-      name = "postcss_modules_scope___postcss_modules_scope_1.1.0.tgz";
+      name = "postcss_modules_scope___postcss_modules_scope_2.2.0.tgz";
       path = fetchurl {
-        name = "postcss_modules_scope___postcss_modules_scope_1.1.0.tgz";
-        url  = "https://registry.yarnpkg.com/postcss-modules-scope/-/postcss-modules-scope-1.1.0.tgz";
-        sha1 = "d6ea64994c79f97b62a72b426fbe6056a194bb90";
+        name = "postcss_modules_scope___postcss_modules_scope_2.2.0.tgz";
+        url  = "https://registry.yarnpkg.com/postcss-modules-scope/-/postcss-modules-scope-2.2.0.tgz";
+        sha1 = "385cae013cc7743f5a7d7602d1073a89eaae62ee";
       };
     }
     {
-      name = "postcss_modules_values___postcss_modules_values_1.3.0.tgz";
+      name = "postcss_modules_values___postcss_modules_values_2.0.0.tgz";
       path = fetchurl {
-        name = "postcss_modules_values___postcss_modules_values_1.3.0.tgz";
-        url  = "https://registry.yarnpkg.com/postcss-modules-values/-/postcss-modules-values-1.3.0.tgz";
-        sha1 = "ecffa9d7e192518389f42ad0e83f72aec456ea20";
+        name = "postcss_modules_values___postcss_modules_values_2.0.0.tgz";
+        url  = "https://registry.yarnpkg.com/postcss-modules-values/-/postcss-modules-values-2.0.0.tgz";
+        sha1 = "479b46dc0c5ca3dc7fa5270851836b9ec7152f64";
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     {
@@ -9665,14 +9729,6 @@
         sha1 = "99a983d365f7b2ad8d0f9b8c3094926eab4b936d";
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-    {
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-      path = fetchurl {
-        name = "postcss___postcss_6.0.23.tgz";
-        url  = "https://registry.yarnpkg.com/postcss/-/postcss-6.0.23.tgz";
-        sha1 = "61c82cc328ac60e677645f979054eb98bc0e3324";
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     {
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       path = fetchurl {
@@ -9681,6 +9737,14 @@
         sha1 = "cc67cdc6b0daa375105b7c424a85567345fc54d9";
       };
     }
+    {
+      name = "postcss___postcss_7.0.30.tgz";
+      path = fetchurl {
+        name = "postcss___postcss_7.0.30.tgz";
+        url  = "https://registry.yarnpkg.com/postcss/-/postcss-7.0.30.tgz";
+        sha1 = "cc9378beffe46a02cbc4506a0477d05fcea9a8e2";
+      };
+    }
     {
       name = "prelude_ls___prelude_ls_1.1.2.tgz";
       path = fetchurl {
@@ -11794,11 +11858,11 @@
       };
     }
     {
-      name = "throttle_debounce___throttle_debounce_2.0.1.tgz";
+      name = "throttle_debounce___throttle_debounce_2.1.0.tgz";
       path = fetchurl {
-        name = "throttle_debounce___throttle_debounce_2.0.1.tgz";
-        url  = "https://registry.yarnpkg.com/throttle-debounce/-/throttle-debounce-2.0.1.tgz";
-        sha1 = "7307ddd6cd9acadb349132fbf6c18d78c88a5e62";
+        name = "throttle_debounce___throttle_debounce_2.1.0.tgz";
+        url  = "https://registry.yarnpkg.com/throttle-debounce/-/throttle-debounce-2.1.0.tgz";
+        sha1 = "257e648f0a56bd9e54fe0f132c4ab8611df4e1d5";
       };
     }
     {
@@ -12114,11 +12178,19 @@
       };
     }
     {
-      name = "tslib___tslib_1.9.3.tgz";
+      name = "tslib___tslib_1.11.1.tgz";
       path = fetchurl {
-        name = "tslib___tslib_1.9.3.tgz";
-        url  = "https://registry.yarnpkg.com/tslib/-/tslib-1.9.3.tgz";
-        sha1 = "d7e4dd79245d85428c4d7e4822a79917954ca286";
+        name = "tslib___tslib_1.11.1.tgz";
+        url  = "https://registry.yarnpkg.com/tslib/-/tslib-1.11.1.tgz";
+        sha1 = "eb15d128827fbee2841549e171f45ed338ac7e35";
+      };
+    }
+    {
+      name = "tsutils___tsutils_3.17.1.tgz";
+      path = fetchurl {
+        name = "tsutils___tsutils_3.17.1.tgz";
+        url  = "https://registry.yarnpkg.com/tsutils/-/tsutils-3.17.1.tgz";
+        sha1 = "ed719917f11ca0dee586272b2ac49e015a2dd759";
       };
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     {
@@ -12241,14 +12313,6 @@
         sha1 = "8b38b10cacdef63337b8b24e4ff86d45aea529a8";
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-    {
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-      path = fetchurl {
-        name = "underscore___underscore_1.9.2.tgz";
-        url  = "https://registry.yarnpkg.com/underscore/-/underscore-1.9.2.tgz";
-        sha1 = "0c8d6f536d6f378a5af264a72f7bec50feb7cf2f";
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     {
       name = "underscore___underscore_1.8.3.tgz";
       path = fetchurl {
@@ -12666,11 +12730,11 @@
       };
     }
     {
-      name = "vue_apollo___vue_apollo_3.0.0_beta.28.tgz";
+      name = "vue_apollo___vue_apollo_3.0.3.tgz";
       path = fetchurl {
-        name = "vue_apollo___vue_apollo_3.0.0_beta.28.tgz";
-        url  = "https://registry.yarnpkg.com/vue-apollo/-/vue-apollo-3.0.0-beta.28.tgz";
-        sha1 = "be6a3a1504be2096cbfb23996537e2fc95c8c239";
+        name = "vue_apollo___vue_apollo_3.0.3.tgz";
+        url  = "https://registry.yarnpkg.com/vue-apollo/-/vue-apollo-3.0.3.tgz";
+        sha1 = "7f29558df76eec0f03251847eef153816a261827";
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     }
     {

From 0b5c534598058959bbcd475a192fe850ba2db2c8 Mon Sep 17 00:00:00 2001
From: talyz <kim.lindberger@gmail.com>
Date: Thu, 4 Jun 2020 13:44:24 +0200
Subject: [PATCH 33/91] gitlab: 13.0.3 -> 13.0.4

https://about.gitlab.com/releases/2020/06/03/critical-security-release-13-0-4-released/
---
 pkgs/applications/version-management/gitlab/data.json     | 8 ++++----
 .../version-management/gitlab/gitaly/default.nix          | 4 ++--
 2 files changed, 6 insertions(+), 6 deletions(-)

diff --git a/pkgs/applications/version-management/gitlab/data.json b/pkgs/applications/version-management/gitlab/data.json
index 7e753a5c19db..308a2399458b 100644
--- a/pkgs/applications/version-management/gitlab/data.json
+++ b/pkgs/applications/version-management/gitlab/data.json
@@ -1,11 +1,11 @@
 {
-  "version": "13.0.3",
-  "repo_hash": "1jgyk8fxcizxggjy7nfyysjbx9bc0fhq3ayzb06gbhwfd0h48435",
+  "version": "13.0.4",
+  "repo_hash": "15pfg3ss1diqsnlf0xpx4ixlpjnvzghzjfvs6y3bv21qnjfwkp0g",
   "owner": "gitlab-org",
   "repo": "gitlab",
-  "rev": "v13.0.3-ee",
+  "rev": "v13.0.4-ee",
   "passthru": {
-    "GITALY_SERVER_VERSION": "13.0.3",
+    "GITALY_SERVER_VERSION": "13.0.4",
     "GITLAB_PAGES_VERSION": "1.18.0",
     "GITLAB_SHELL_VERSION": "13.2.0",
     "GITLAB_WORKHORSE_VERSION": "8.31.1"
diff --git a/pkgs/applications/version-management/gitlab/gitaly/default.nix b/pkgs/applications/version-management/gitlab/gitaly/default.nix
index 9c5e372b96aa..374bf953f786 100644
--- a/pkgs/applications/version-management/gitlab/gitaly/default.nix
+++ b/pkgs/applications/version-management/gitlab/gitaly/default.nix
@@ -19,14 +19,14 @@ let
       };
   };
 in buildGoPackage rec {
-  version = "13.0.3";
+  version = "13.0.4";
   pname = "gitaly";
 
   src = fetchFromGitLab {
     owner = "gitlab-org";
     repo = "gitaly";
     rev = "v${version}";
-    sha256 = "0dvgi1pgn3pv7d6fkfmrp5y61inv9zgrw0224v44w00wm7sv9xi1";
+    sha256 = "1hnjv2q98016srvjmyjpd5fkpg68mra6qk0asl1l83z2vin2xrkm";
   };
 
   # Fix a check which assumes that hook files are writeable by their

From d8040e24d0b0337b61e8c6ddf83efec605013342 Mon Sep 17 00:00:00 2001
From: Konstantin Alekseev <mail@kalekseev.com>
Date: Thu, 4 Jun 2020 17:01:37 +0300
Subject: [PATCH 34/91] overmind: 2.0.3 -> 2.1.1

---
 pkgs/applications/misc/overmind/default.nix |   6 +-
 pkgs/applications/misc/overmind/deps.nix    | 147 ++++++++++++++++++++
 2 files changed, 151 insertions(+), 2 deletions(-)
 create mode 100644 pkgs/applications/misc/overmind/deps.nix

diff --git a/pkgs/applications/misc/overmind/default.nix b/pkgs/applications/misc/overmind/default.nix
index 29dc6f54e6c2..ca05facaa48f 100644
--- a/pkgs/applications/misc/overmind/default.nix
+++ b/pkgs/applications/misc/overmind/default.nix
@@ -2,7 +2,7 @@
 
 buildGoPackage rec {
   pname = "overmind";
-  version = "2.0.3";
+  version = "2.1.1";
   goPackagePath = "github.com/DarthSim/overmind";
 
   nativeBuildInputs = [ makeWrapper ];
@@ -15,9 +15,11 @@ buildGoPackage rec {
     owner = "DarthSim";
     repo = pname;
     rev = "v${version}";
-    sha256 = "0c551c240lqxdjg0jj01rh2fyhwls02k5lczlxacj05prp1plz9p";
+    sha256 = "0akqn8s1mgk5q00gzh3ymq7nrnkyi6avyaxxvbxnjyq9bxsqz327";
   };
 
+  goDeps = ./deps.nix;
+
   meta = with lib; {
     homepage = "https://github.com/DarthSim/overmind";
     description = "Process manager for Procfile-based applications and tmux";
diff --git a/pkgs/applications/misc/overmind/deps.nix b/pkgs/applications/misc/overmind/deps.nix
new file mode 100644
index 000000000000..afcc8d9726fe
--- /dev/null
+++ b/pkgs/applications/misc/overmind/deps.nix
@@ -0,0 +1,147 @@
+# file generated from go.mod using vgo2nix (https://github.com/adisbladis/vgo2nix)
+[
+  {
+    goPackagePath = "github.com/BurntSushi/toml";
+    fetch = {
+      type = "git";
+      url = "https://github.com/BurntSushi/toml";
+      rev = "v0.3.1";
+      sha256 = "1fjdwwfzyzllgiwydknf1pwjvy49qxfsczqx5gz3y0izs7as99j6";
+    };
+  }
+  {
+    goPackagePath = "github.com/DarthSim/godotenv";
+    fetch = {
+      type = "git";
+      url = "https://github.com/DarthSim/godotenv";
+      rev = "v1.3.1";
+      sha256 = "0fb9nl5qrnv7f9w0pgg00ak34afw9kjgcql0l38z22faz2bhgl1q";
+    };
+  }
+  {
+    goPackagePath = "github.com/cpuguy83/go-md2man";
+    fetch = {
+      type = "git";
+      url = "https://github.com/cpuguy83/go-md2man";
+      rev = "f79a8a8ca69d";
+      sha256 = "0r1f7v475dxxgzqci1mxfliwadcrk86ippflx9n411325l4g3ghv";
+    };
+  }
+  {
+    goPackagePath = "github.com/kardianos/osext";
+    fetch = {
+      type = "git";
+      url = "https://github.com/kardianos/osext";
+      rev = "2bc1f35cddc0";
+      sha256 = "1pvrbrvmrf4mx0fxbfaphbzgqgwn8v6lkfk2vyrs0znxrs1xyc5r";
+    };
+  }
+  {
+    goPackagePath = "github.com/matoous/go-nanoid";
+    fetch = {
+      type = "git";
+      url = "https://github.com/matoous/go-nanoid";
+      rev = "eab626deece6";
+      sha256 = "1a82lclk56y7c44jg7wn5vq733dmn0g20r5yqbchrxnpfl75dw89";
+    };
+  }
+  {
+    goPackagePath = "github.com/pkg/term";
+    fetch = {
+      type = "git";
+      url = "https://github.com/pkg/term";
+      rev = "aa71e9d9e942";
+      sha256 = "1gyxnj4jq3z2k4gjwwlz8hn56c1ys8jvafdd61nd6qs8jwp6iqp3";
+    };
+  }
+  {
+    goPackagePath = "github.com/pmezard/go-difflib";
+    fetch = {
+      type = "git";
+      url = "https://github.com/pmezard/go-difflib";
+      rev = "v1.0.0";
+      sha256 = "0c1cn55m4rypmscgf0rrb88pn58j3ysvc2d0432dp3c6fqg6cnzw";
+    };
+  }
+  {
+    goPackagePath = "github.com/russross/blackfriday";
+    fetch = {
+      type = "git";
+      url = "https://github.com/russross/blackfriday";
+      rev = "v2.0.1";
+      sha256 = "0nlz7isdd4rgnwzs68499hlwicxz34j2k2a0b8jy0y7ycd2bcr5j";
+    };
+  }
+  {
+    goPackagePath = "github.com/sevlyar/go-daemon";
+    fetch = {
+      type = "git";
+      url = "https://github.com/sevlyar/go-daemon";
+      rev = "v0.1.5";
+      sha256 = "1y3gnxaifykcjcbzx91lz9bc93b95w3xj4rjxjbii26pm3j7gqyk";
+    };
+  }
+  {
+    goPackagePath = "github.com/shurcooL/sanitized_anchor_name";
+    fetch = {
+      type = "git";
+      url = "https://github.com/shurcooL/sanitized_anchor_name";
+      rev = "v1.0.0";
+      sha256 = "1gv9p2nr46z80dnfjsklc6zxbgk96349sdsxjz05f3z6wb6m5l8f";
+    };
+  }
+  {
+    goPackagePath = "github.com/urfave/cli";
+    fetch = {
+      type = "git";
+      url = "https://github.com/urfave/cli";
+      rev = "v1.22.2";
+      sha256 = "10mcnvi5qmn00vpyk6si8gjka7p654wr9hac4zc9w5h3ickhvbdc";
+    };
+  }
+  {
+    goPackagePath = "golang.org/x/crypto";
+    fetch = {
+      type = "git";
+      url = "https://go.googlesource.com/crypto";
+      rev = "88737f569e3a";
+      sha256 = "02vkqfd6kc28zm6lffagw8nr78sayv6jabfgk9dcifl7826vi3k7";
+    };
+  }
+  {
+    goPackagePath = "golang.org/x/sys";
+    fetch = {
+      type = "git";
+      url = "https://go.googlesource.com/sys";
+      rev = "81d4e9dc473e";
+      sha256 = "0074zjpkhclz5qbgjv0zmdwy6hmf5k2ri5yagnm6i12ahxaa48dr";
+    };
+  }
+  {
+    goPackagePath = "gopkg.in/check.v1";
+    fetch = {
+      type = "git";
+      url = "https://gopkg.in/check.v1";
+      rev = "20d25e280405";
+      sha256 = "0k1m83ji9l1a7ng8a7v40psbymxasmssbrrhpdv2wl4rhs0nc3np";
+    };
+  }
+  {
+    goPackagePath = "gopkg.in/urfave/cli.v1";
+    fetch = {
+      type = "git";
+      url = "https://gopkg.in/urfave/cli.v1";
+      rev = "v1.20.0";
+      sha256 = "0y6f4sbzkiiwrxbl15biivj8c7qwxnvm3zl2dd3mw4wzg4x10ygj";
+    };
+  }
+  {
+    goPackagePath = "gopkg.in/yaml.v2";
+    fetch = {
+      type = "git";
+      url = "https://gopkg.in/yaml.v2";
+      rev = "v2.2.2";
+      sha256 = "01wj12jzsdqlnidpyjssmj0r4yavlqy7dwrg7adqd8dicjc4ncsa";
+    };
+  }
+]

From 2379e36124a07db4730f8f2f7529952aa8e57743 Mon Sep 17 00:00:00 2001
From: Luflosi <luflosi@luflosi.de>
Date: Sun, 31 May 2020 03:28:37 +0200
Subject: [PATCH 35/91] python39: fix build on macOS

Basically the same changes as in 81d15948cc19c2584f13031518349327ce353c82 but for python3.9 instead of python3.8.
---
 pkgs/development/interpreters/python/cpython/default.nix | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/pkgs/development/interpreters/python/cpython/default.nix b/pkgs/development/interpreters/python/cpython/default.nix
index 3ad4021d6dfe..32fc65368623 100644
--- a/pkgs/development/interpreters/python/cpython/default.nix
+++ b/pkgs/development/interpreters/python/cpython/default.nix
@@ -107,7 +107,7 @@ in with passthru; stdenv.mkDerivation {
     # Backport a fix for discovering `rpmbuild` command when doing `python setup.py bdist_rpm` to 3.5, 3.6, 3.7.
     # See: https://bugs.python.org/issue11122
     ./3.7/fix-hardcoded-path-checking-for-rpmbuild.patch
-  ] ++ optionals (isPy37 || isPy38) [
+  ] ++ optionals (isPy37 || isPy38 || isPy39) [
     # Fix darwin build https://bugs.python.org/issue34027
     ./3.7/darwin-libutil.patch
   ] ++ optionals (isPy3k && hasDistutilsCxxPatch) [
@@ -118,7 +118,7 @@ in with passthru; stdenv.mkDerivation {
     (
       if isPy35 then
         ./3.5/python-3.x-distutils-C++.patch
-      else if isPy37 || isPy38 then
+      else if isPy37 || isPy38 || isPy39 then
         ./3.7/python-3.x-distutils-C++.patch
       else
         fetchpatch {

From f9af74e75a27fac3bb50a43fce0c72c9b6ac24ed Mon Sep 17 00:00:00 2001
From: Frederik Rietdijk <fridh@fridh.nl>
Date: Thu, 4 Jun 2020 17:53:31 +0200
Subject: [PATCH 36/91] meson: fix hash after incorrect merge

---
 pkgs/development/tools/build-managers/meson/default.nix | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/pkgs/development/tools/build-managers/meson/default.nix b/pkgs/development/tools/build-managers/meson/default.nix
index f7468bf7f0c9..5b1266da3823 100644
--- a/pkgs/development/tools/build-managers/meson/default.nix
+++ b/pkgs/development/tools/build-managers/meson/default.nix
@@ -12,7 +12,7 @@ python3Packages.buildPythonApplication rec {
 
   src = python3Packages.fetchPypi {
     inherit pname version;
-    sha256 = "1p4n0b6jn8pyj6rwxg48ayphji8v1482cabrwhzf2avnf92znxig";
+    sha256 = "0m84zb0q67vnxmd6ldz477w6yjdnk9c44xhlwh1g1pzqx3m6wwd7";
   };
 
   postFixup = ''

From c51202ffa0133b0f186bea285fc22982f9ad93cb Mon Sep 17 00:00:00 2001
From: Maximilian Bosch <maximilian@mbosch.me>
Date: Thu, 4 Jun 2020 18:03:33 +0200
Subject: [PATCH 37/91] riot-web: 1.6.2 -> 1.6.3

https://github.com/vector-im/riot-web/releases/tag/v1.6.3
---
 .../networking/instant-messengers/riot/riot-web.nix           | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/pkgs/applications/networking/instant-messengers/riot/riot-web.nix b/pkgs/applications/networking/instant-messengers/riot/riot-web.nix
index e61237dbb699..cfe9008273fe 100644
--- a/pkgs/applications/networking/instant-messengers/riot/riot-web.nix
+++ b/pkgs/applications/networking/instant-messengers/riot/riot-web.nix
@@ -12,11 +12,11 @@ let
 
 in stdenv.mkDerivation rec {
   pname = "riot-web";
-  version = "1.6.2";
+  version = "1.6.3";
 
   src = fetchurl {
     url = "https://github.com/vector-im/riot-web/releases/download/v${version}/riot-v${version}.tar.gz";
-    sha256 = "1cyjw3x9yh96cn84r95zziwxgifkmzd5kdf4l69b7mwnqcr78dp0";
+    sha256 = "1v8sz2shj2gjf0vlj7r8g9d2v0qbsg9x64bq5g62nglbnphkcv0k";
   };
 
   installPhase = ''

From 91099c1426d1c65a4ba54add625ecd0fd432e282 Mon Sep 17 00:00:00 2001
From: Maximilian Bosch <maximilian@mbosch.me>
Date: Thu, 4 Jun 2020 18:03:50 +0200
Subject: [PATCH 38/91] riot-desktop: 1.6.2 -> 1.6.3

https://github.com/vector-im/riot-desktop/releases/tag/v1.6.3
---
 .../riot/riot-desktop-package.json               |  5 +++--
 .../riot/riot-desktop-yarndeps.nix               | 16 ++++++++--------
 .../instant-messengers/riot/riot-desktop.nix     |  4 ++--
 3 files changed, 13 insertions(+), 12 deletions(-)

diff --git a/pkgs/applications/networking/instant-messengers/riot/riot-desktop-package.json b/pkgs/applications/networking/instant-messengers/riot/riot-desktop-package.json
index 959b99e68f63..d7a2ccc5ed69 100644
--- a/pkgs/applications/networking/instant-messengers/riot/riot-desktop-package.json
+++ b/pkgs/applications/networking/instant-messengers/riot/riot-desktop-package.json
@@ -2,7 +2,7 @@
   "name": "riot-desktop",
   "productName": "Riot",
   "main": "src/electron-main.js",
-  "version": "1.6.2",
+  "version": "1.6.3",
   "description": "A feature-rich client for Matrix.org",
   "author": "New Vector Ltd.",
   "repository": {
@@ -14,6 +14,7 @@
   "scripts": {
     "mkdirs": "mkdirp packages deploys",
     "fetch": "yarn run mkdirs && node scripts/fetch-package.js",
+    "asar-webapp": "asar p webapp webapp.asar",
     "start": "electron .",
     "lint": "eslint src/ scripts/ hak/",
     "build:native": "yarn run hak",
@@ -47,7 +48,7 @@
     "find-npm-prefix": "^1.0.2",
     "fs-extra": "^8.1.0",
     "glob": "^7.1.6",
-    "matrix-js-sdk": "6.1.0",
+    "matrix-js-sdk": "6.2.0",
     "mkdirp": "^1.0.3",
     "needle": "^2.3.2",
     "node-pre-gyp": "^0.14.0",
diff --git a/pkgs/applications/networking/instant-messengers/riot/riot-desktop-yarndeps.nix b/pkgs/applications/networking/instant-messengers/riot/riot-desktop-yarndeps.nix
index 4aa56181c4c0..10b201e3c7c4 100644
--- a/pkgs/applications/networking/instant-messengers/riot/riot-desktop-yarndeps.nix
+++ b/pkgs/applications/networking/instant-messengers/riot/riot-desktop-yarndeps.nix
@@ -146,11 +146,11 @@
       };
     }
     {
-      name = "acorn___acorn_6.4.0.tgz";
+      name = "acorn___acorn_6.4.1.tgz";
       path = fetchurl {
-        name = "acorn___acorn_6.4.0.tgz";
-        url  = "https://registry.yarnpkg.com/acorn/-/acorn-6.4.0.tgz";
-        sha1 = "b659d2ffbafa24baf5db1cdbb2c94a983ecd2784";
+        name = "acorn___acorn_6.4.1.tgz";
+        url  = "https://registry.yarnpkg.com/acorn/-/acorn-6.4.1.tgz";
+        sha1 = "531e58ba3f51b9dacb9a6646ca4debf5b14ca474";
       };
     }
     {
@@ -3154,11 +3154,11 @@
       };
     }
     {
-      name = "matrix_js_sdk___matrix_js_sdk_6.1.0.tgz";
+      name = "matrix_js_sdk___matrix_js_sdk_6.2.0.tgz";
       path = fetchurl {
-        name = "matrix_js_sdk___matrix_js_sdk_6.1.0.tgz";
-        url  = "https://registry.yarnpkg.com/matrix-js-sdk/-/matrix-js-sdk-6.1.0.tgz";
-        sha1 = "c28ad67c113c4aa9c8bce409c7ba550170bdc2ee";
+        name = "matrix_js_sdk___matrix_js_sdk_6.2.0.tgz";
+        url  = "https://registry.yarnpkg.com/matrix-js-sdk/-/matrix-js-sdk-6.2.0.tgz";
+        sha1 = "b1aa6f23858ab3ee4b66be25d3e854f6e287d36b";
       };
     }
     {
diff --git a/pkgs/applications/networking/instant-messengers/riot/riot-desktop.nix b/pkgs/applications/networking/instant-messengers/riot/riot-desktop.nix
index e5b815e7c884..3210d2b87295 100644
--- a/pkgs/applications/networking/instant-messengers/riot/riot-desktop.nix
+++ b/pkgs/applications/networking/instant-messengers/riot/riot-desktop.nix
@@ -8,12 +8,12 @@
 
 let
   executableName = "riot-desktop";
-  version = "1.6.2";
+  version = "1.6.3";
   src = fetchFromGitHub {
     owner = "vector-im";
     repo = "riot-desktop";
     rev = "v${version}";
-    sha256 = "1anmch9z3na7rphxb0p9cnk55388z22iwfnfjhmjps1ii5wx4rls";
+    sha256 = "0dic2xpasf4m22275yrf7s8xnkh77n14cr62gd86j6g7x9rxa8fd";
   };
   electron = electron_7;
 

From cda41cf743f0942aa3f1833d5e0385ad585fa411 Mon Sep 17 00:00:00 2001
From: Nikolay Korotkiy <sikmir@gmail.com>
Date: Wed, 3 Jun 2020 23:59:53 +0300
Subject: [PATCH 39/91] josm: 16239 -> 16538

PR #89443
---
 pkgs/applications/misc/josm/default.nix | 8 ++++----
 1 file changed, 4 insertions(+), 4 deletions(-)

diff --git a/pkgs/applications/misc/josm/default.nix b/pkgs/applications/misc/josm/default.nix
index f68de80b7012..89d09703ddc5 100644
--- a/pkgs/applications/misc/josm/default.nix
+++ b/pkgs/applications/misc/josm/default.nix
@@ -1,20 +1,20 @@
 { stdenv, fetchurl, fetchsvn, makeWrapper, unzip, jre, libXxf86vm }:
 let
   pname = "josm";
-  version = "16239";
+  version = "16538";
   srcs = {
     jar = fetchurl {
       url = "https://josm.openstreetmap.de/download/josm-snapshot-${version}.jar";
-      sha256 = "041n81mnd587043f8wwjv8ckbx0hlsqf3pc7hzbns1y89xdghms1";
+      sha256 = "07hzwcjnfbl3s8l0m6japln0clm6wjm1zd3r1pd47b1dvclnyv28";
     };
     macosx = fetchurl {
       url = "https://josm.openstreetmap.de/download/macosx/josm-macosx-${version}.zip";
-      sha256 = "1nlw1rvwdfp1hhsxyjli8pylm0hb7k62sa0nqvgyiw54dz78n00c";
+      sha256 = "1y0ssrwfqnmcvxwjfa3gdc3m9a952n8l3pdx0zmmaqwws4kak2a2";
     };
     pkg = fetchsvn {
       url = "https://josm.openstreetmap.de/svn/trunk/native/linux/tested";
       rev = version;
-      sha256 = "1qqk4bal84wnb66jym6qrdi10ypzvdzihd4jk5rnyfl3wm5qafbi";
+      sha256 = "0ybjca6dhnbwl3xqwrc91c444fzs1zrlnz7qr3l79s1vll9r4qd1";
     };
   };
 in

From f26f911a7795c06915b02b73225fad03f40b1245 Mon Sep 17 00:00:00 2001
From: Scott Hamilton <sgn.hamilton@protonmail.com>
Date: Tue, 19 May 2020 23:21:29 +0200
Subject: [PATCH 40/91] ksmoothdock: Init at 6.2 stable

---
 .../applications/misc/ksmoothdock/default.nix | 43 +++++++++++++++++++
 pkgs/top-level/all-packages.nix               |  2 +
 2 files changed, 45 insertions(+)
 create mode 100644 pkgs/applications/misc/ksmoothdock/default.nix

diff --git a/pkgs/applications/misc/ksmoothdock/default.nix b/pkgs/applications/misc/ksmoothdock/default.nix
new file mode 100644
index 000000000000..9538329bf9b5
--- /dev/null
+++ b/pkgs/applications/misc/ksmoothdock/default.nix
@@ -0,0 +1,43 @@
+{ lib
+, mkDerivation
+, fetchFromGitHub
+, fetchpatch
+, cmake
+, extra-cmake-modules
+, kactivities
+, qtbase
+}:
+
+mkDerivation rec {
+  pname = "KSmoothDock";
+  version = "6.2";
+
+  src = fetchFromGitHub {
+    owner = "dangvd";
+    repo = "ksmoothdock";
+    rev = "v${version}";
+    sha256 = "182x47cymgnp5xisa0xx93hmd5wrfigy8zccrr23p4r9hp8xbnam";
+  };
+
+  patches = [
+    # Fixed hard coded installation path to use CMAKE_INSTALL_BINDIR and CMAKE_INSTALL_PREFIX instead
+    (fetchpatch {
+      url = "https://github.com/dangvd/ksmoothdock/commit/00799bef8a1c1fe61ef9274866267d9fe9194041.patch";
+      sha256 = "1nmb7gf1ggzicxz8k4fd67xhwjy404myqzjpgjym66wqxm0arni4";
+    })
+  ];
+
+  nativeBuildInputs = [ cmake extra-cmake-modules ];
+
+  buildInputs = [ kactivities qtbase ];
+
+  cmakeDir = "../src";
+
+  meta = with lib; {
+    description = "A cool desktop panel for KDE Plasma 5";
+    license = licenses.mit;
+    homepage = "https://dangvd.github.io/ksmoothdock/";
+    maintainers = with maintainers; [ shamilton ];
+    platforms = platforms.linux;
+  };
+}
diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix
index 70462514ddb0..acf8fbec823a 100644
--- a/pkgs/top-level/all-packages.nix
+++ b/pkgs/top-level/all-packages.nix
@@ -4582,6 +4582,8 @@ in
 
   peruse = libsForQt5.callPackage ../tools/misc/peruse { };
 
+  ksmoothdock = libsForQt5.callPackage ../applications/misc/ksmoothdock { };
+
   kst = libsForQt5.callPackage ../tools/graphics/kst { gsl = gsl_1; };
 
   kstars = libsForQt5.callPackage ../applications/science/astronomy/kstars { };

From 397a90a6995429e8bb18b9e512e5b51dc2ebaf7a Mon Sep 17 00:00:00 2001
From: SCOTT-HAMILTON <sgn.hamilton@protonmail.com>
Date: Thu, 4 Jun 2020 12:17:06 +0200
Subject: [PATCH 41/91] maintainers: add shamilton

---
 maintainers/maintainer-list.nix | 6 ++++++
 1 file changed, 6 insertions(+)

diff --git a/maintainers/maintainer-list.nix b/maintainers/maintainer-list.nix
index b500f03c61fe..97123feaafc9 100644
--- a/maintainers/maintainer-list.nix
+++ b/maintainers/maintainer-list.nix
@@ -7062,6 +7062,12 @@
     githubId = 1588288;
     name = "Shahrukh Khan";
   };
+  shamilton = {
+    email = "sgn.hamilton@protonmail.com";
+    github = "SCOTT-HAMILTON";
+    githubId = 24496705;
+    name = "Scott Hamilton";
+  };
   shanemikel = {
     email = "shanepearlman@pm.me";
     github = "shanemikel";

From 4204de06fb3e0e4f8f7ae4b10cb39b55526594a6 Mon Sep 17 00:00:00 2001
From: David Wood <david@davidtw.co>
Date: Thu, 4 Jun 2020 16:47:01 +0100
Subject: [PATCH 42/91] vimPlugins: update

---
 pkgs/misc/vim-plugins/generated.nix | 252 ++++++++++++++--------------
 1 file changed, 126 insertions(+), 126 deletions(-)

diff --git a/pkgs/misc/vim-plugins/generated.nix b/pkgs/misc/vim-plugins/generated.nix
index dd105b8e74cb..a44ce6fdbb69 100644
--- a/pkgs/misc/vim-plugins/generated.nix
+++ b/pkgs/misc/vim-plugins/generated.nix
@@ -197,12 +197,12 @@ let
 
   ayu-vim = buildVimPluginFrom2Nix {
     pname = "ayu-vim";
-    version = "2020-04-13";
+    version = "2020-05-29";
     src = fetchFromGitHub {
       owner = "ayu-theme";
       repo = "ayu-vim";
-      rev = "a3a2d2a4ce36e0f681236b3ab15043c0b09460b1";
-      sha256 = "06lhfwh8z178bgbbcz4mxjpk6zajz19x1jhaahbsqg3641y5pj0p";
+      rev = "0745635421688ce777f663d13531996cb4da6514";
+      sha256 = "0w7ixhz72g3lr1hkn450k6x8sdgv95pp6pxbykka3s01i506rzmj";
     };
     meta.homepage = "https://github.com/ayu-theme/ayu-vim/";
   };
@@ -293,12 +293,12 @@ let
 
   caw-vim = buildVimPluginFrom2Nix {
     pname = "caw-vim";
-    version = "2020-05-12";
+    version = "2020-06-01";
     src = fetchFromGitHub {
       owner = "tyru";
       repo = "caw.vim";
-      rev = "2c6b9f2d9a2b4d172adde4c393b1a04c59a0b471";
-      sha256 = "0137vs50xmdggc2nqclp6i7i640nkj31czm8cmqx19504b7hy8vw";
+      rev = "0725e7c273e2c39d8730adc78e0fd20e0d57d173";
+      sha256 = "14rsjy5lllmb84vs5q111cb17c6nwc37zf460kh8ii1ijziyqhy2";
     };
     meta.homepage = "https://github.com/tyru/caw.vim/";
   };
@@ -401,12 +401,12 @@ let
 
   coc-fzf = buildVimPluginFrom2Nix {
     pname = "coc-fzf";
-    version = "2020-05-28";
+    version = "2020-06-02";
     src = fetchFromGitHub {
       owner = "antoinemadec";
       repo = "coc-fzf";
-      rev = "ba8cf9afc8aae3ea4086d89a01bd414d42a6b8bc";
-      sha256 = "13dv08kpp3cxqgikznyxkl7nsjzxn97aklk6k6s19cw3b5al15pn";
+      rev = "8c89226acc29fe2695e8f86355c04ce1587f0fda";
+      sha256 = "04616lzpch9r5cj6nh4dw4b666iyi314n95mi62n5qcaibr6r85s";
     };
     meta.homepage = "https://github.com/antoinemadec/coc-fzf/";
   };
@@ -473,12 +473,12 @@ let
 
   coc-java = buildVimPluginFrom2Nix {
     pname = "coc-java";
-    version = "2020-04-23";
+    version = "2020-05-29";
     src = fetchFromGitHub {
       owner = "neoclide";
       repo = "coc-java";
-      rev = "3c914c2b9e154889361d2631cd2188cf7e5fa020";
-      sha256 = "0q7q2z7k2sxqgi6nyj669iq2p4h3962i8hv3gzg2mpi0p73xs98k";
+      rev = "bf698c0df4d63c7c84013d58111b7b458f6b12f1";
+      sha256 = "1nyswz55dg4d1nz6ff2479ibnzcdhv9ky8a4awlakwp0g0c3680s";
     };
     meta.homepage = "https://github.com/neoclide/coc-java/";
   };
@@ -521,12 +521,12 @@ let
 
   coc-metals = buildVimPluginFrom2Nix {
     pname = "coc-metals";
-    version = "2020-05-25";
+    version = "2020-06-01";
     src = fetchFromGitHub {
       owner = "ckipp01";
       repo = "coc-metals";
-      rev = "99431ec2eb4e5a9a0309d63bd4167e5af2f1d781";
-      sha256 = "13qqfhwv745svf5672hm7m4n3dk9c15py5l0znygn5a6gs5rjzzm";
+      rev = "0286d7f11647dca4a63d84fe4101dbabc7731c04";
+      sha256 = "068aqynvzsnrz2dh68zdy40h342nfrf8kvv9234qdr91mhbvrxv4";
     };
     meta.homepage = "https://github.com/ckipp01/coc-metals/";
   };
@@ -605,12 +605,12 @@ let
 
   coc-rust-analyzer = buildVimPluginFrom2Nix {
     pname = "coc-rust-analyzer";
-    version = "2020-05-27";
+    version = "2020-06-04";
     src = fetchFromGitHub {
       owner = "fannheyward";
       repo = "coc-rust-analyzer";
-      rev = "95fe45bb82f88a5da5461a2925c7daac1ff24155";
-      sha256 = "1zczdz07fmcd7i05bz99m3a90v1dnbf4mjbh1iha0h2kyj0fj0sd";
+      rev = "612e7eb6fdc55bc97972907b3926bf11188295ad";
+      sha256 = "13fn4jqcqhsvhjqcfifrkzp8sbwvm1859vgj9ic6c64xi9adp9nr";
     };
     meta.homepage = "https://github.com/fannheyward/coc-rust-analyzer/";
   };
@@ -773,24 +773,24 @@ let
 
   coc-yank = buildVimPluginFrom2Nix {
     pname = "coc-yank";
-    version = "2020-03-17";
+    version = "2020-06-02";
     src = fetchFromGitHub {
       owner = "neoclide";
       repo = "coc-yank";
-      rev = "6cb8bc7f2d41b9fb75c797c5805444badeff3dd9";
-      sha256 = "0s28684531ihczg5nf2m3f8z1vx9fw4yllfq7jz8g7ifw922ddxb";
+      rev = "7983c28509a61a7eb014e178525845797f5779ed";
+      sha256 = "1mjdd1kqvc5hzygjs2gv8vrpr3wc2a9590cr6vq0pfllxbkyqjng";
     };
     meta.homepage = "https://github.com/neoclide/coc-yank/";
   };
 
   coc-nvim = buildVimPluginFrom2Nix {
     pname = "coc-nvim";
-    version = "2020-05-28";
+    version = "2020-06-04";
     src = fetchFromGitHub {
       owner = "neoclide";
       repo = "coc.nvim";
-      rev = "60cd2a0935319ec7150006ce6457a9f10a5f04c2";
-      sha256 = "1wanp845yv07gkyvl4kv7bd1l46mz8wy0mw7bmcxi4d6qqfjpdrv";
+      rev = "d992e129997d9bda225a4e59ed5e5a57fca1896a";
+      sha256 = "0f4vsg2fbwn4jpfj8lv8ib8i8adzvr9inw4q861w87zssk65bi8g";
     };
     meta.homepage = "https://github.com/neoclide/coc.nvim/";
   };
@@ -821,12 +821,12 @@ let
 
   command-t = buildVimPluginFrom2Nix {
     pname = "command-t";
-    version = "2020-05-09";
+    version = "2020-06-02";
     src = fetchFromGitHub {
       owner = "wincent";
       repo = "command-t";
-      rev = "9c7f81208a32fe4d26096d0d268ac6e802d945fd";
-      sha256 = "0jmwhlcycb1hp65d2g54mdd7xmpmvr33lm0130c9yk16mv2ia65i";
+      rev = "ea7a889bda2849ba87fc12053bf6dd14467d7b72";
+      sha256 = "02rswhlkgbapnjzqi2nv95ag08p9cjlqscwv6i17f9kvba929hkl";
       fetchSubmodules = true;
     };
     meta.homepage = "https://github.com/wincent/command-t/";
@@ -918,12 +918,12 @@ let
 
   csv-vim = buildVimPluginFrom2Nix {
     pname = "csv-vim";
-    version = "2020-05-07";
+    version = "2020-05-29";
     src = fetchFromGitHub {
       owner = "chrisbra";
       repo = "csv.vim";
-      rev = "361e9c1190c53d78446743be308709bb1c253981";
-      sha256 = "104qgkcvnvff59ydk18wwlsvsyw6l3nh6x49f1j2rpfmnlclamcs";
+      rev = "c84fd12a226d7b3b8d4b7e77ed5ddd1c5fa970ad";
+      sha256 = "1gjhbgwqf1zg813a3wcqj2x29gs4x7yc185mxi3lvnxghwj9j2i3";
     };
     meta.homepage = "https://github.com/chrisbra/csv.vim/";
   };
@@ -1014,12 +1014,12 @@ let
 
   defx-nvim = buildVimPluginFrom2Nix {
     pname = "defx-nvim";
-    version = "2020-05-26";
+    version = "2020-05-30";
     src = fetchFromGitHub {
       owner = "Shougo";
       repo = "defx.nvim";
-      rev = "56e0c4fd9ce28dce416420a0639792b0fc42115f";
-      sha256 = "1nliphg9fjyga8p5b3flzqn7znxyazqakpzr03czzdm0vr96z9r1";
+      rev = "5d8133aba89acaab3b532b15eed8e6cba77b1cd2";
+      sha256 = "1gw73cybp1qxgnqfa6hn6g2ky30canhmrchf550kp5j8nflqa887";
     };
     meta.homepage = "https://github.com/Shougo/defx.nvim/";
   };
@@ -1062,12 +1062,12 @@ let
 
   denite-nvim = buildVimPluginFrom2Nix {
     pname = "denite-nvim";
-    version = "2020-05-23";
+    version = "2020-06-01";
     src = fetchFromGitHub {
       owner = "Shougo";
       repo = "denite.nvim";
-      rev = "09c22ad10f4adaca9845db106b7a46a80dd6f6ca";
-      sha256 = "1prkahf7793bi4zr60vmjsky33bzn69wjgsfkdhvgjla8kyiwf6v";
+      rev = "7c971aa2e40853b21f7967788e9ea3baa4e97ab2";
+      sha256 = "04v3v14g7nnmc6rhz5vpppqgkk8z67am4nc6k8jwbrv61sq1ga6b";
     };
     meta.homepage = "https://github.com/Shougo/denite.nvim/";
   };
@@ -1209,12 +1209,12 @@ let
 
   deoplete-lsp = buildVimPluginFrom2Nix {
     pname = "deoplete-lsp";
-    version = "2020-03-07";
+    version = "2020-05-30";
     src = fetchFromGitHub {
       owner = "Shougo";
       repo = "deoplete-lsp";
-      rev = "6aa2bfd73a181fa6b55021264c4a8a83237ce558";
-      sha256 = "1bcvfbv046fk34vnc1ly8civ3sibqlzli8vm2548dfxc55wcwsys";
+      rev = "2994bf57fed476a5b9878e842b14b5b5c5b22211";
+      sha256 = "0y22nay6qkn0sl74hlhhri3hjw5r3fwmmxby3j9q0avszlmq7352";
     };
     meta.homepage = "https://github.com/Shougo/deoplete-lsp/";
   };
@@ -1293,12 +1293,12 @@ let
 
   deoplete-nvim = buildVimPluginFrom2Nix {
     pname = "deoplete-nvim";
-    version = "2020-05-26";
+    version = "2020-06-02";
     src = fetchFromGitHub {
       owner = "Shougo";
       repo = "deoplete.nvim";
-      rev = "8aef99a951686488c03070d1cf1a2155837f5f1b";
-      sha256 = "0rhni3hix26flls9i1ajwnpfdynkvqxll5rhi1256pvhy2nizamq";
+      rev = "921688d72168e436c82f3d413a5de7d78369a0c7";
+      sha256 = "01wpq4majnhh4lxmai0ix5dqvfxrbdsj2pic785x3kaqn4all31w";
     };
     meta.homepage = "https://github.com/Shougo/deoplete.nvim/";
   };
@@ -1353,12 +1353,12 @@ let
 
   editorconfig-vim = buildVimPluginFrom2Nix {
     pname = "editorconfig-vim";
-    version = "2020-05-26";
+    version = "2020-06-02";
     src = fetchFromGitHub {
       owner = "editorconfig";
       repo = "editorconfig-vim";
-      rev = "0818c7eb7ccd1cfb687161e68e55355c34694d28";
-      sha256 = "1qiljz47b59sd3gyvr7l0kmb13hbi5204nnhjnpj8bd98kf676w7";
+      rev = "0a3c1d8082e38a5ebadcba7bb3a608d88a9ff044";
+      sha256 = "1w60rsij0ag74vjal2l75k4g4xv8438a0izvzpy5xir4bby2g7dz";
       fetchSubmodules = true;
     };
     meta.homepage = "https://github.com/editorconfig/editorconfig-vim/";
@@ -1548,12 +1548,12 @@ let
 
   fzf-vim = buildVimPluginFrom2Nix {
     pname = "fzf-vim";
-    version = "2020-05-23";
+    version = "2020-06-01";
     src = fetchFromGitHub {
       owner = "junegunn";
       repo = "fzf.vim";
-      rev = "7a655179a43cd431862a2bf5d297d9e55fd3f814";
-      sha256 = "1ivxkg60g3jlmd14ndwfqdkzm74naddfghafpv622dainv4qw20j";
+      rev = "5aa5977d744d1183806079d307f023b0c5ceaaef";
+      sha256 = "0b7lgdr66q99dfc73iwgb11pd4b465qmslfzqypsp8jamckk1jii";
     };
     meta.homepage = "https://github.com/junegunn/fzf.vim/";
   };
@@ -1572,12 +1572,12 @@ let
 
   gentoo-syntax = buildVimPluginFrom2Nix {
     pname = "gentoo-syntax";
-    version = "2020-03-08";
+    version = "2020-06-04";
     src = fetchFromGitHub {
       owner = "gentoo";
       repo = "gentoo-syntax";
-      rev = "42163237b57c56de9a24fe6549e46c805fab2bb3";
-      sha256 = "1bg3ismjlp99drsfyrkjb137ypxmp0qpy8pp9ry9i8ljmnffbgal";
+      rev = "632d0a72c83cd0ccf7f40cb64470dc84f51bdce2";
+      sha256 = "0q5cj2zpcdxmwm8dcj0nbyffjs1a075fgqbang4s0ikangbhx586";
     };
     meta.homepage = "https://github.com/gentoo/gentoo-syntax/";
   };
@@ -1800,12 +1800,12 @@ let
 
   indentLine = buildVimPluginFrom2Nix {
     pname = "indentLine";
-    version = "2020-03-06";
+    version = "2020-05-29";
     src = fetchFromGitHub {
       owner = "Yggdroot";
       repo = "indentLine";
-      rev = "15aceda8c4eea621b66faa8673fca0b9fbe2f457";
-      sha256 = "1icb1h811lp86hg4w8y8mmmsfm4c80n7m8r1wi58lnm60mjasas4";
+      rev = "43dbd7092801637972b1d9fcecaaeee11f8e00cf";
+      sha256 = "0qnzi19vb5qk773pc9v75wqm2ipdkcscljblla6gq05srm1h8x9d";
     };
     meta.homepage = "https://github.com/Yggdroot/indentLine/";
   };
@@ -2029,24 +2029,24 @@ let
 
   lh-brackets = buildVimPluginFrom2Nix {
     pname = "lh-brackets";
-    version = "2020-05-16";
+    version = "2020-06-03";
     src = fetchFromGitHub {
       owner = "LucHermitte";
       repo = "lh-brackets";
-      rev = "2f70a30a342969e8cf4e21c965d523ff456173a9";
-      sha256 = "0qpiqrcr9azamvm8mzcfb3fbp7rxgbhi2bdc926i9a7psazgmyfl";
+      rev = "d6ea4b24b14f3ead29dc8df2e2d942c2b0287948";
+      sha256 = "0gh21v0gnwhq2gim1hhfd0376zk4jdhfn9dldczxvzipxw3jaknr";
     };
     meta.homepage = "https://github.com/LucHermitte/lh-brackets/";
   };
 
   lh-vim-lib = buildVimPluginFrom2Nix {
     pname = "lh-vim-lib";
-    version = "2020-05-18";
+    version = "2020-06-03";
     src = fetchFromGitHub {
       owner = "LucHermitte";
       repo = "lh-vim-lib";
-      rev = "03673b75c2b2ba8d25c1323804725a6eb9bbb995";
-      sha256 = "0nk3s916k7vv9cgpf4rxf5qc4bmsf74mxa59fdi8wlzda0m5dyhk";
+      rev = "448982501112f69f8edb7fb7bb61573091036366";
+      sha256 = "1k4man0jm8pkvb2f8l2f743ipwiz76ljzzn1hi4pvs0wncdr7k6q";
     };
     meta.homepage = "https://github.com/LucHermitte/lh-vim-lib/";
   };
@@ -2389,12 +2389,12 @@ let
 
   neoterm = buildVimPluginFrom2Nix {
     pname = "neoterm";
-    version = "2020-04-29";
+    version = "2020-05-30";
     src = fetchFromGitHub {
       owner = "kassio";
       repo = "neoterm";
-      rev = "667f02bc417d2a4669502d1fc6876684882d8ba9";
-      sha256 = "0xa4w935hfbs8nqw4aqw7ihasw4rlsqjx2i92pi1x5w8d40jnws1";
+      rev = "d6667d8fca8425753d7da215f57e1a0e936e75de";
+      sha256 = "1wmsqnhbd438xs8dp2jrkk7fhzzi7w1l66jqwfwz6sxl0ayc3k7y";
     };
     meta.homepage = "https://github.com/kassio/neoterm/";
   };
@@ -2449,12 +2449,12 @@ let
 
   nerdtree = buildVimPluginFrom2Nix {
     pname = "nerdtree";
-    version = "2020-05-26";
+    version = "2020-06-01";
     src = fetchFromGitHub {
       owner = "preservim";
       repo = "nerdtree";
-      rev = "052b1f00a0ef14b0019f4d0cda9906ba93f9a0d6";
-      sha256 = "1wn0gf8cqhmv23llhydvkhd638b3n5ya8fa6r74gm40f9h3qcp85";
+      rev = "d48ab70721d4f688ed34bd5939e2d6f4c89548c5";
+      sha256 = "0rd228ks4gppskcvz6cj94gnbd9wykic8f4ilc9smaqw817gq20s";
     };
     meta.homepage = "https://github.com/preservim/nerdtree/";
   };
@@ -2497,12 +2497,12 @@ let
 
   NrrwRgn = buildVimPluginFrom2Nix {
     pname = "NrrwRgn";
-    version = "2020-04-21";
+    version = "2020-05-29";
     src = fetchFromGitHub {
       owner = "chrisbra";
       repo = "NrrwRgn";
-      rev = "a558325a2d0cca810520ed2b62e0c0e543e97bf6";
-      sha256 = "1ngwyga0pslkw1d5qwz98zz8axfwc0mvxig5yp59gra9awgk6nw8";
+      rev = "82a0fc6a3415db9a891f9d9f19b512041c865109";
+      sha256 = "00fd466i5860bazd4pj69k8piicgckxj68lkn2l7haawj9chslzs";
     };
     meta.homepage = "https://github.com/chrisbra/NrrwRgn/";
   };
@@ -2557,12 +2557,12 @@ let
 
   nvim-lsp = buildVimPluginFrom2Nix {
     pname = "nvim-lsp";
-    version = "2020-05-24";
+    version = "2020-06-02";
     src = fetchFromGitHub {
       owner = "neovim";
       repo = "nvim-lsp";
-      rev = "54f4f823a27ffa8f9e6c308d550888f3ae21373e";
-      sha256 = "19v8gwq6ym0ipia039x6xw00xlwrhrmm1bw8s5v5d6j1wl1mbcmz";
+      rev = "a7fdf268b1c51f6395900e437060728701aa8b77";
+      sha256 = "04v1g4sa6dccaffrlkmyh410ppza5zlrnrapf9c3sfj6bmsr4jd3";
     };
     meta.homepage = "https://github.com/neovim/nvim-lsp/";
   };
@@ -3266,12 +3266,12 @@ let
 
   tagbar = buildVimPluginFrom2Nix {
     pname = "tagbar";
-    version = "2020-05-05";
+    version = "2020-05-30";
     src = fetchFromGitHub {
       owner = "majutsushi";
       repo = "tagbar";
-      rev = "2a1486447aa62e47faeb98e43fe75c50007870b3";
-      sha256 = "0003l09xhdyyq9m0y7hs1nccv3vdmz64qd3ra3rl6lqigzv8v01n";
+      rev = "a36880be2217814b7034f05eb0f402e8183befc9";
+      sha256 = "16rj8pv8b9knbxi2967h96kgwp4r631kmpxdy74xsf938z4cya0j";
     };
     meta.homepage = "https://github.com/majutsushi/tagbar/";
   };
@@ -3795,12 +3795,12 @@ let
 
   vim-airline = buildVimPluginFrom2Nix {
     pname = "vim-airline";
-    version = "2020-05-27";
+    version = "2020-05-31";
     src = fetchFromGitHub {
       owner = "vim-airline";
       repo = "vim-airline";
-      rev = "c744fb81b657417512af20063a36e7cb1ecd4f5c";
-      sha256 = "1x55gkqgvy9k2wmcs5y1jmzqni6xd7fjh5269c3465br3hhzlgh2";
+      rev = "d221dc531298f467a6901861b0360741c2a387b0";
+      sha256 = "0w4lwpynn5cj9si3apyfmxb8x8hv0acggsyfvmhpi41638sz2310";
     };
     meta.homepage = "https://github.com/vim-airline/vim-airline/";
   };
@@ -3867,12 +3867,12 @@ let
 
   vim-autoformat = buildVimPluginFrom2Nix {
     pname = "vim-autoformat";
-    version = "2020-04-03";
+    version = "2020-05-29";
     src = fetchFromGitHub {
       owner = "Chiel92";
       repo = "vim-autoformat";
-      rev = "555c956db3bdd8ae6f1aa5af1c5fd37eac749e6a";
-      sha256 = "0dhxa9jrhahqs1wh41115w8r3xcczbjpvnj65ldzs7q9vc4n12xq";
+      rev = "f116a3b86cb3e9fbcd8563cce4958759610d8f51";
+      sha256 = "1vamldn3y9pima18ryrrzn2mz1czzzadkiiklcrcl104v9mhv4am";
     };
     meta.homepage = "https://github.com/Chiel92/vim-autoformat/";
   };
@@ -4011,12 +4011,12 @@ let
 
   vim-codefmt = buildVimPluginFrom2Nix {
     pname = "vim-codefmt";
-    version = "2020-05-08";
+    version = "2020-06-02";
     src = fetchFromGitHub {
       owner = "google";
       repo = "vim-codefmt";
-      rev = "57d6fbb4ab3480ab0b0f4c10ecc7c14eb44d94bc";
-      sha256 = "0a8w2cb1aj4764hbdxnjpnpdl6xf6slsz4f19lbm8fdsq0v3izk8";
+      rev = "e083709f482332e5ff765f4d7b7901d51ddc9ef4";
+      sha256 = "0d46h4jx01mib4wyj60qx4r34y201gaj1vpkb48pkw9qlsaqs31i";
     };
     meta.homepage = "https://github.com/google/vim-codefmt/";
   };
@@ -4203,12 +4203,12 @@ let
 
   vim-devicons = buildVimPluginFrom2Nix {
     pname = "vim-devicons";
-    version = "2020-05-28";
+    version = "2020-05-30";
     src = fetchFromGitHub {
       owner = "ryanoasis";
       repo = "vim-devicons";
-      rev = "8a5133cb5ba229fa80055a031b6070b1651cd102";
-      sha256 = "0lxvl378gjwaywmj5fskr8bzdchlh0g33p79ja0pgzs6qffg4jj2";
+      rev = "15b532ebd4455d9d099e9ccebab09915e0562754";
+      sha256 = "0cfiwdaj43fx2gq7916i98iyn3ky79d359ylgpznczn88k37s1wi";
     };
     meta.homepage = "https://github.com/ryanoasis/vim-devicons/";
   };
@@ -4539,24 +4539,24 @@ let
 
   vim-fugitive = buildVimPluginFrom2Nix {
     pname = "vim-fugitive";
-    version = "2020-05-28";
+    version = "2020-05-31";
     src = fetchFromGitHub {
       owner = "tpope";
       repo = "vim-fugitive";
-      rev = "5d32f7528988644c3b4a9491a9a4b37ccbd1aa62";
-      sha256 = "1h544c7h53fjn9cnvx67p1yays6147v0d445h60n6zwz02zgr4q1";
+      rev = "27a5c3abd211c2784513dab4db082fa414ad0967";
+      sha256 = "18rvp600vk0anbzxdgcw3kdswqr3100b3jgnmz6c2k5c50wz37rm";
     };
     meta.homepage = "https://github.com/tpope/vim-fugitive/";
   };
 
   vim-ghost = buildVimPluginFrom2Nix {
     pname = "vim-ghost";
-    version = "2020-05-20";
+    version = "2020-06-04";
     src = fetchFromGitHub {
       owner = "raghur";
       repo = "vim-ghost";
-      rev = "795b24dd248d507b88e30baadc46080ace07cdea";
-      sha256 = "1g0gblkwba7fd4jgkp2y6rsdld7zhhwf7m2fv63j0aj5fhr74q5r";
+      rev = "fd3665df734c1f8d3620b11fc8bdfacb2faae35e";
+      sha256 = "0p1y5g9fj58m48z9c6vdis7d4zajlv9j0y8065rmivws3df9n50j";
     };
     meta.homepage = "https://github.com/raghur/vim-ghost/";
   };
@@ -4599,12 +4599,12 @@ let
 
   vim-gitgutter = buildVimPluginFrom2Nix {
     pname = "vim-gitgutter";
-    version = "2020-05-01";
+    version = "2020-05-29";
     src = fetchFromGitHub {
       owner = "airblade";
       repo = "vim-gitgutter";
-      rev = "b356cc9a7da08ebeb919cd04b2831dad71a34d38";
-      sha256 = "0y13nbrfank0rqsq5pf1cfcrrfapfvqinhbww97lxhs9clv44kny";
+      rev = "9784226ba766662d298554a5c66fd938497f2233";
+      sha256 = "19f28c3wasgck78xqdygsyiwv17qqh69nkn9n1gajcbmbr55lhzn";
     };
     meta.homepage = "https://github.com/airblade/vim-gitgutter/";
   };
@@ -4635,12 +4635,12 @@ let
 
   vim-go = buildVimPluginFrom2Nix {
     pname = "vim-go";
-    version = "2020-05-28";
+    version = "2020-05-31";
     src = fetchFromGitHub {
       owner = "fatih";
       repo = "vim-go";
-      rev = "9d76bb022e09c1d7c26a71748aa523453da9a764";
-      sha256 = "0yi0m25m1vh2h4gfqj04zf6llqg6cinxd96c7q42h1fa9w8kx93s";
+      rev = "8e72eef0b35839db0a028a37bd28debc20c1201b";
+      sha256 = "0rpay08m3q0syvw9ks45b3cvggghi1350h7dp87bx24jd3dqvdvf";
     };
     meta.homepage = "https://github.com/fatih/vim-go/";
   };
@@ -5188,24 +5188,24 @@ let
 
   vim-lsc = buildVimPluginFrom2Nix {
     pname = "vim-lsc";
-    version = "2020-05-29";
+    version = "2020-06-02";
     src = fetchFromGitHub {
       owner = "natebosch";
       repo = "vim-lsc";
-      rev = "22ad7433b35b194015856d5b41037b752e192764";
-      sha256 = "1jww2x2cl9pfgjxwcmcl829fvhxqagn1fcnk4d5hrgg7w6k4c10g";
+      rev = "baa44d450043cc020e1d6f0609d0e081bbcc6f9e";
+      sha256 = "07m2wqich31pxp9jgh3fzjqqdm7vdjh8rjf67d4l6kkf13dw89yh";
     };
     meta.homepage = "https://github.com/natebosch/vim-lsc/";
   };
 
   vim-maktaba = buildVimPluginFrom2Nix {
     pname = "vim-maktaba";
-    version = "2020-05-28";
+    version = "2020-05-29";
     src = fetchFromGitHub {
       owner = "google";
       repo = "vim-maktaba";
-      rev = "7260313ed17b2cd11b18d817d4afc8fb8cb6f3f3";
-      sha256 = "0nn8c1kyg0s41id46g7s9qklnnxck8xvnvsd3gpak5ii1rxpzrsh";
+      rev = "2636a0fabaae80e3bebdb3c571220aebf875dfcf";
+      sha256 = "1vcc8gaikbgdq1k4f3jdjrmlwad1z44g3biifgqyp0sgd7bjd9lp";
     };
     meta.homepage = "https://github.com/google/vim-maktaba/";
   };
@@ -5584,12 +5584,12 @@ let
 
   vim-plug = buildVimPluginFrom2Nix {
     pname = "vim-plug";
-    version = "2020-05-06";
+    version = "2020-06-03";
     src = fetchFromGitHub {
       owner = "junegunn";
       repo = "vim-plug";
-      rev = "71c41fccf5ca42081d4d49aa1ea2f71c694bc4cf";
-      sha256 = "1cp8qw1fblp26v9hjvd00bl2kcjqi44xw30aclxcqis6pfj1yvv0";
+      rev = "6583b990321f03500505dc43a3f62cbbc7369862";
+      sha256 = "1k9y119xwb84fgsyyp1npjh5z1wlbbm1922n411h70cfa4928rfh";
     };
     meta.homepage = "https://github.com/junegunn/vim-plug/";
   };
@@ -5608,12 +5608,12 @@ let
 
   vim-polyglot = buildVimPluginFrom2Nix {
     pname = "vim-polyglot";
-    version = "2020-05-28";
+    version = "2020-06-01";
     src = fetchFromGitHub {
       owner = "sheerun";
       repo = "vim-polyglot";
-      rev = "f0f49cf0fa8bbcb7f84e3ffe699a934142498b14";
-      sha256 = "1fpiwjn16lvzcghsjbcak1hf0fqgknfyimbbw3pw4dcnvzv5w03a";
+      rev = "5b3866302755da9e5a917ca42a38a4a03fb5f3e5";
+      sha256 = "0v6ll98j44hgmczhl6cp4rw734x582iz7942cw5jmbp7wg83nz88";
     };
     meta.homepage = "https://github.com/sheerun/vim-polyglot/";
   };
@@ -5668,12 +5668,12 @@ let
 
   vim-ps1 = buildVimPluginFrom2Nix {
     pname = "vim-ps1";
-    version = "2020-03-30";
+    version = "2020-06-03";
     src = fetchFromGitHub {
       owner = "PProvost";
       repo = "vim-ps1";
-      rev = "9fdf92846fbeb8445e535cf0c5bdb4b1dce4a506";
-      sha256 = "0w98zcjvb64fhd6ahy3cqrs4y7zacak9nzpkkhr03l6zzbqb5kz4";
+      rev = "9d52746c3f879aa1aca4deb46edd63823d76d89d";
+      sha256 = "1yx1rnpln0lxvf6pbdn8yyxiyhi7rfl8wl94kd8djk51h5lhq1n3";
     };
     meta.homepage = "https://github.com/PProvost/vim-ps1/";
   };
@@ -6028,12 +6028,12 @@ let
 
   vim-snippets = buildVimPluginFrom2Nix {
     pname = "vim-snippets";
-    version = "2020-05-16";
+    version = "2020-06-02";
     src = fetchFromGitHub {
       owner = "honza";
       repo = "vim-snippets";
-      rev = "087d3e7c72912baeb6b1d7ba626e61d50092c848";
-      sha256 = "1vir3sl2px0m4pr2z013mfzwagrh9wqkj3wagysjvm779l462407";
+      rev = "900bf93c6680e38ce568dba26c3f48b4365ac730";
+      sha256 = "1gxqmvr6hz7vblrji2dz2l1x18264ainbl70j60yfx3vjp5aa9vq";
     };
     meta.homepage = "https://github.com/honza/vim-snippets/";
   };
@@ -6220,12 +6220,12 @@ let
 
   vim-test = buildVimPluginFrom2Nix {
     pname = "vim-test";
-    version = "2020-05-26";
+    version = "2020-06-03";
     src = fetchFromGitHub {
       owner = "vim-test";
       repo = "vim-test";
-      rev = "b882783760b954144dda5be7ad6cd4bdefd013fb";
-      sha256 = "0s0dlgjkkxajkfnpihc09py0qbbamibhalsv2vdvwcqva02xrylx";
+      rev = "e819de903fe10fdcbb3714f3e96bafd918e4d117";
+      sha256 = "05jh89rgd4p6mkryv5dm83jhxfmg1k77rk4zq35i8dy8i6cvi41z";
     };
     meta.homepage = "https://github.com/vim-test/vim-test/";
   };
@@ -6448,12 +6448,12 @@ let
 
   vim-visual-multi = buildVimPluginFrom2Nix {
     pname = "vim-visual-multi";
-    version = "2020-05-28";
+    version = "2020-05-30";
     src = fetchFromGitHub {
       owner = "mg979";
       repo = "vim-visual-multi";
-      rev = "cdcaa75d5a6054c7c69b6ebbaa4dff2fce6f96ed";
-      sha256 = "0mszzkmi4kgmf6qjh5f2mr9y1b3p4jzvlsykvzavz8zb55yy4vkx";
+      rev = "40991d51a6a3b22d56eefe9f6145602dfe1d494b";
+      sha256 = "0kawg12w7ssk58lv6ppv85c75x4af7dbkw9ngx7n91y1f1wkinjj";
     };
     meta.homepage = "https://github.com/mg979/vim-visual-multi/";
   };
@@ -6700,12 +6700,12 @@ let
 
   vimtex = buildVimPluginFrom2Nix {
     pname = "vimtex";
-    version = "2020-05-25";
+    version = "2020-06-02";
     src = fetchFromGitHub {
       owner = "lervag";
       repo = "vimtex";
-      rev = "666191bc563be6716af6e167404dccb27f2fb8d1";
-      sha256 = "03gc4w57j5xpcnmj60qrsc2qbrkvpmn9cfzz8xwha26cpngrwv9q";
+      rev = "7ef9c50aaf110debb54a8b1f4bafcb34ec86a623";
+      sha256 = "1i9phcxb29x14n202971vflqlwd9y2wa74v8aic4xhvqb5rli8as";
     };
     meta.homepage = "https://github.com/lervag/vimtex/";
   };

From 6cc2a43e59a73ea1635bd0b2c62241dfbe557421 Mon Sep 17 00:00:00 2001
From: David Wood <david@davidtw.co>
Date: Thu, 4 Jun 2020 16:56:21 +0100
Subject: [PATCH 43/91] vimPlugins: resolve github repository redirects

---
 pkgs/misc/vim-plugins/generated.nix    | 4 ++--
 pkgs/misc/vim-plugins/vim-plugin-names | 2 +-
 2 files changed, 3 insertions(+), 3 deletions(-)

diff --git a/pkgs/misc/vim-plugins/generated.nix b/pkgs/misc/vim-plugins/generated.nix
index a44ce6fdbb69..71bd2c513d03 100644
--- a/pkgs/misc/vim-plugins/generated.nix
+++ b/pkgs/misc/vim-plugins/generated.nix
@@ -2379,12 +2379,12 @@ let
     pname = "NeoSolarized";
     version = "2020-03-10";
     src = fetchFromGitHub {
-      owner = "icymind";
+      owner = "overcache";
       repo = "NeoSolarized";
       rev = "70609c44215c8d2c43ad8c631296caae08a9c8d4";
       sha256 = "0bxrm2vm3z1y37sm6m2hdn72g2sw31dx1xhmjvd0ng72cnp84d9k";
     };
-    meta.homepage = "https://github.com/icymind/NeoSolarized/";
+    meta.homepage = "https://github.com/overcache/NeoSolarized/";
   };
 
   neoterm = buildVimPluginFrom2Nix {
diff --git a/pkgs/misc/vim-plugins/vim-plugin-names b/pkgs/misc/vim-plugins/vim-plugin-names
index 6e558ed67f9b..54c78b9df961 100644
--- a/pkgs/misc/vim-plugins/vim-plugin-names
+++ b/pkgs/misc/vim-plugins/vim-plugin-names
@@ -141,7 +141,6 @@ hsanson/vim-android
 hsitz/VimOrganizer
 iamcco/coc-spell-checker
 ianks/vim-tsx
-icymind/NeoSolarized
 idris-hackers/idris-vim
 Inazuma110/deoplete-greek
 inkarkat/vim-SyntaxRange
@@ -366,6 +365,7 @@ osyo-manga/shabadou.vim
 osyo-manga/vim-anzu
 osyo-manga/vim-textobj-multiblock
 osyo-manga/vim-watchdogs
+overcache/NeoSolarized
 pangloss/vim-javascript
 parsonsmatt/intero-neovim
 pearofducks/ansible-vim

From a05a858d176fafe958cc59246d51521da60dfca6 Mon Sep 17 00:00:00 2001
From: David Wood <david@davidtw.co>
Date: Thu, 4 Jun 2020 17:05:40 +0100
Subject: [PATCH 44/91] vimPlugins.vim-hocon: init at 2017-09-08

---
 pkgs/misc/vim-plugins/generated.nix    | 12 ++++++++++++
 pkgs/misc/vim-plugins/vim-plugin-names |  1 +
 2 files changed, 13 insertions(+)

diff --git a/pkgs/misc/vim-plugins/generated.nix b/pkgs/misc/vim-plugins/generated.nix
index 71bd2c513d03..09d45125d920 100644
--- a/pkgs/misc/vim-plugins/generated.nix
+++ b/pkgs/misc/vim-plugins/generated.nix
@@ -4789,6 +4789,18 @@ let
     meta.homepage = "https://github.com/alx741/vim-hindent/";
   };
 
+  vim-hocon = buildVimPluginFrom2Nix {
+    pname = "vim-hocon";
+    version = "2017-09-08";
+    src = fetchFromGitHub {
+      owner = "GEverding";
+      repo = "vim-hocon";
+      rev = "bb8fb14e00f8fc1eec27dd39dcc605aac43328a3";
+      sha256 = "0w6ckm931zpm1k3w02gl58hgfxzfy53sgcc9m8jz3vgi3zz0vki2";
+    };
+    meta.homepage = "https://github.com/GEverding/vim-hocon/";
+  };
+
   vim-hoogle = buildVimPluginFrom2Nix {
     pname = "vim-hoogle";
     version = "2018-03-04";
diff --git a/pkgs/misc/vim-plugins/vim-plugin-names b/pkgs/misc/vim-plugins/vim-plugin-names
index 54c78b9df961..04bd2ba17ee1 100644
--- a/pkgs/misc/vim-plugins/vim-plugin-names
+++ b/pkgs/misc/vim-plugins/vim-plugin-names
@@ -111,6 +111,7 @@ fsharp/vim-fsharp
 fszymanski/deoplete-emoji
 garbas/vim-snipmate
 gentoo/gentoo-syntax
+GEverding/vim-hocon
 gibiansky/vim-textobj-haskell
 glts/vim-textobj-comment
 godlygeek/csapprox

From 98238a01a6fb572780084ab52e506411051f8871 Mon Sep 17 00:00:00 2001
From: David Wood <david@davidtw.co>
Date: Thu, 4 Jun 2020 17:15:01 +0100
Subject: [PATCH 45/91] vimPlugins.vim-spirv: init at 2019-11-20

---
 pkgs/misc/vim-plugins/generated.nix    | 12 ++++++++++++
 pkgs/misc/vim-plugins/vim-plugin-names |  1 +
 2 files changed, 13 insertions(+)

diff --git a/pkgs/misc/vim-plugins/generated.nix b/pkgs/misc/vim-plugins/generated.nix
index 09d45125d920..ba4380516328 100644
--- a/pkgs/misc/vim-plugins/generated.nix
+++ b/pkgs/misc/vim-plugins/generated.nix
@@ -6098,6 +6098,18 @@ let
     meta.homepage = "https://github.com/tpope/vim-speeddating/";
   };
 
+  vim-spirv = buildVimPluginFrom2Nix {
+    pname = "vim-spirv";
+    version = "2019-11-20";
+    src = fetchFromGitHub {
+      owner = "kbenzie";
+      repo = "vim-spirv";
+      rev = "e71404f92990aa4718925ade568427c0d8631469";
+      sha256 = "0aimpcz6vvrkcfgsj0xp12xdy1l83n387rsy74dzk23a220d59na";
+    };
+    meta.homepage = "https://github.com/kbenzie/vim-spirv/";
+  };
+
   vim-startify = buildVimPluginFrom2Nix {
     pname = "vim-startify";
     version = "2020-04-18";
diff --git a/pkgs/misc/vim-plugins/vim-plugin-names b/pkgs/misc/vim-plugins/vim-plugin-names
index 04bd2ba17ee1..afd77fa66895 100644
--- a/pkgs/misc/vim-plugins/vim-plugin-names
+++ b/pkgs/misc/vim-plugins/vim-plugin-names
@@ -206,6 +206,7 @@ kana/vim-tabpagecd
 kana/vim-textobj-function
 kana/vim-textobj-user
 kassio/neoterm
+kbenzie/vim-spirv
 kchmck/vim-coffee-script
 KeitaNakamura/neodark.vim
 keith/swift.vim

From db21ea283068a557c95720009eae17d205ee29f6 Mon Sep 17 00:00:00 2001
From: David Wood <david@davidtw.co>
Date: Thu, 4 Jun 2020 17:24:25 +0100
Subject: [PATCH 46/91] vimPlugins.vim-hybrid: init at 2016-01-05

---
 pkgs/misc/vim-plugins/generated.nix    | 16 ++++++++++++++--
 pkgs/misc/vim-plugins/vim-plugin-names |  1 +
 2 files changed, 15 insertions(+), 2 deletions(-)

diff --git a/pkgs/misc/vim-plugins/generated.nix b/pkgs/misc/vim-plugins/generated.nix
index ba4380516328..549131b0719b 100644
--- a/pkgs/misc/vim-plugins/generated.nix
+++ b/pkgs/misc/vim-plugins/generated.nix
@@ -609,8 +609,8 @@ let
     src = fetchFromGitHub {
       owner = "fannheyward";
       repo = "coc-rust-analyzer";
-      rev = "612e7eb6fdc55bc97972907b3926bf11188295ad";
-      sha256 = "13fn4jqcqhsvhjqcfifrkzp8sbwvm1859vgj9ic6c64xi9adp9nr";
+      rev = "acd5e7fca38dbc8ad8bfe9f187f1f4e6ee64ea88";
+      sha256 = "14qyszmyzykibdkdv38cypc8gmhaz0301prirjbpf2gijryk922b";
     };
     meta.homepage = "https://github.com/fannheyward/coc-rust-analyzer/";
   };
@@ -4837,6 +4837,18 @@ let
     meta.homepage = "https://github.com/vim-utils/vim-husk/";
   };
 
+  vim-hybrid = buildVimPluginFrom2Nix {
+    pname = "vim-hybrid";
+    version = "2016-01-05";
+    src = fetchFromGitHub {
+      owner = "w0ng";
+      repo = "vim-hybrid";
+      rev = "cc58baabeabc7b83768e25b852bf89c34756bf90";
+      sha256 = "1c3q39121hiw85r9ymiyhz5zsf6bl9pwk4pgj6nh6ckwns4cgcmw";
+    };
+    meta.homepage = "https://github.com/w0ng/vim-hybrid/";
+  };
+
   vim-hybrid-material = buildVimPluginFrom2Nix {
     pname = "vim-hybrid-material";
     version = "2018-11-12";
diff --git a/pkgs/misc/vim-plugins/vim-plugin-names b/pkgs/misc/vim-plugins/vim-plugin-names
index afd77fa66895..fb7d1a9da7a7 100644
--- a/pkgs/misc/vim-plugins/vim-plugin-names
+++ b/pkgs/misc/vim-plugins/vim-plugin-names
@@ -562,6 +562,7 @@ vito-c/jq.vim
 vmchale/ats-vim
 vmchale/dhall-vim
 VundleVim/Vundle.vim
+w0ng/vim-hybrid
 wakatime/vim-wakatime
 wannesm/wmgraphviz.vim
 wellle/targets.vim

From 50eddf8a7225bdcd8bff32159a6e7c97d81c1355 Mon Sep 17 00:00:00 2001
From: David Wood <david@davidtw.co>
Date: Thu, 4 Jun 2020 17:33:54 +0100
Subject: [PATCH 47/91] vimPlugins.vim-tmux-clipboard: init at 2019-04-07

---
 pkgs/misc/vim-plugins/generated.nix    | 12 ++++++++++++
 pkgs/misc/vim-plugins/vim-plugin-names |  1 +
 2 files changed, 13 insertions(+)

diff --git a/pkgs/misc/vim-plugins/generated.nix b/pkgs/misc/vim-plugins/generated.nix
index 549131b0719b..b09a3c9cc2ce 100644
--- a/pkgs/misc/vim-plugins/generated.nix
+++ b/pkgs/misc/vim-plugins/generated.nix
@@ -6362,6 +6362,18 @@ let
     meta.homepage = "https://github.com/tmux-plugins/vim-tmux/";
   };
 
+  vim-tmux-clipboard = buildVimPluginFrom2Nix {
+    pname = "vim-tmux-clipboard";
+    version = "2019-04-07";
+    src = fetchFromGitHub {
+      owner = "roxma";
+      repo = "vim-tmux-clipboard";
+      rev = "47187740b88f9dab213f44678800cc797223808e";
+      sha256 = "1a7rpbvb7dgjfnrh95zg2ia6iiz2mz2xps31msb8h14hcj6dsv6y";
+    };
+    meta.homepage = "https://github.com/roxma/vim-tmux-clipboard/";
+  };
+
   vim-tmux-focus-events = buildVimPluginFrom2Nix {
     pname = "vim-tmux-focus-events";
     version = "2019-12-09";
diff --git a/pkgs/misc/vim-plugins/vim-plugin-names b/pkgs/misc/vim-plugins/vim-plugin-names
index fb7d1a9da7a7..5b2c8060b528 100644
--- a/pkgs/misc/vim-plugins/vim-plugin-names
+++ b/pkgs/misc/vim-plugins/vim-plugin-names
@@ -406,6 +406,7 @@ ron89/thesaurus_query.vim
 roxma/nvim-cm-racer
 roxma/nvim-completion-manager
 roxma/nvim-yarp
+roxma/vim-tmux-clipboard
 RRethy/vim-illuminate
 rust-lang/rust.vim
 ryanoasis/vim-devicons

From f9b8c148df2cc395f43b3daa2e938a61ab3c1b4a Mon Sep 17 00:00:00 2001
From: David Wood <david@davidtw.co>
Date: Thu, 4 Jun 2020 17:43:20 +0100
Subject: [PATCH 48/91] vimPlugins.vim-numbertoggle: init at 2017-10-26

---
 pkgs/misc/vim-plugins/generated.nix    | 12 ++++++++++++
 pkgs/misc/vim-plugins/vim-plugin-names |  1 +
 2 files changed, 13 insertions(+)

diff --git a/pkgs/misc/vim-plugins/generated.nix b/pkgs/misc/vim-plugins/generated.nix
index b09a3c9cc2ce..97de2a7a246e 100644
--- a/pkgs/misc/vim-plugins/generated.nix
+++ b/pkgs/misc/vim-plugins/generated.nix
@@ -5402,6 +5402,18 @@ let
     meta.homepage = "https://github.com/LnL7/vim-nix/";
   };
 
+  vim-numbertoggle = buildVimPluginFrom2Nix {
+    pname = "vim-numbertoggle";
+    version = "2017-10-26";
+    src = fetchFromGitHub {
+      owner = "jeffkreeftmeijer";
+      repo = "vim-numbertoggle";
+      rev = "cfaecb9e22b45373bb4940010ce63a89073f6d8b";
+      sha256 = "1rrmvv7ali50rpbih1s0fj00a3hjspwinx2y6nhwac7bjsnqqdwi";
+    };
+    meta.homepage = "https://github.com/jeffkreeftmeijer/vim-numbertoggle/";
+  };
+
   vim-obsession = buildVimPluginFrom2Nix {
     pname = "vim-obsession";
     version = "2020-01-19";
diff --git a/pkgs/misc/vim-plugins/vim-plugin-names b/pkgs/misc/vim-plugins/vim-plugin-names
index 5b2c8060b528..55e79a9620d4 100644
--- a/pkgs/misc/vim-plugins/vim-plugin-names
+++ b/pkgs/misc/vim-plugins/vim-plugin-names
@@ -160,6 +160,7 @@ jceb/vim-orgmode
 jeetsukumaran/vim-buffergator
 jeetsukumaran/vim-indentwise
 jeffkreeftmeijer/neovim-sensible
+jeffkreeftmeijer/vim-numbertoggle
 jelera/vim-javascript-syntax
 jgdavey/tslime.vim
 jhradilek/vim-docbk

From 568d540b42b353bb0297deaee1b55b7fd1c9a068 Mon Sep 17 00:00:00 2001
From: David Wood <david@davidtw.co>
Date: Thu, 4 Jun 2020 17:52:44 +0100
Subject: [PATCH 49/91] vimPlugins.is-vim: init at 2017-10-30

---
 pkgs/misc/vim-plugins/generated.nix    | 12 ++++++++++++
 pkgs/misc/vim-plugins/vim-plugin-names |  1 +
 2 files changed, 13 insertions(+)

diff --git a/pkgs/misc/vim-plugins/generated.nix b/pkgs/misc/vim-plugins/generated.nix
index 97de2a7a246e..30b0756dbe17 100644
--- a/pkgs/misc/vim-plugins/generated.nix
+++ b/pkgs/misc/vim-plugins/generated.nix
@@ -1846,6 +1846,18 @@ let
     meta.homepage = "https://github.com/twerth/ir_black/";
   };
 
+  is-vim = buildVimPluginFrom2Nix {
+    pname = "is-vim";
+    version = "2017-10-30";
+    src = fetchFromGitHub {
+      owner = "haya14busa";
+      repo = "is.vim";
+      rev = "61d5029310c69bde700b2d46a454f80859b5af17";
+      sha256 = "1nnf6y62mc0rj7hbrapfkmr91ypsqkzhwgpfx7pahz8m3a2324q6";
+    };
+    meta.homepage = "https://github.com/haya14busa/is.vim/";
+  };
+
   jdaddy-vim = buildVimPluginFrom2Nix {
     pname = "jdaddy-vim";
     version = "2014-02-22";
diff --git a/pkgs/misc/vim-plugins/vim-plugin-names b/pkgs/misc/vim-plugins/vim-plugin-names
index 55e79a9620d4..530850f684f3 100644
--- a/pkgs/misc/vim-plugins/vim-plugin-names
+++ b/pkgs/misc/vim-plugins/vim-plugin-names
@@ -131,6 +131,7 @@ guns/xterm-color-table.vim
 hashivim/vim-terraform
 haya14busa/incsearch-easymotion.vim
 haya14busa/incsearch.vim
+haya14busa/is.vim
 haya14busa/vim-asterisk
 heavenshell/vim-jsdoc
 hecal3/vim-leader-guide

From f37b4a8d436741f22fc802b89c4f370a183498ce Mon Sep 17 00:00:00 2001
From: David Wood <david@davidtw.co>
Date: Thu, 4 Jun 2020 18:02:16 +0100
Subject: [PATCH 50/91] vimPlugins.vim-mundo: init at 2020-05-06

---
 pkgs/misc/vim-plugins/generated.nix    | 12 ++++++++++++
 pkgs/misc/vim-plugins/vim-plugin-names |  1 +
 2 files changed, 13 insertions(+)

diff --git a/pkgs/misc/vim-plugins/generated.nix b/pkgs/misc/vim-plugins/generated.nix
index 30b0756dbe17..4ecfa222de74 100644
--- a/pkgs/misc/vim-plugins/generated.nix
+++ b/pkgs/misc/vim-plugins/generated.nix
@@ -5354,6 +5354,18 @@ let
     meta.homepage = "https://github.com/terryma/vim-multiple-cursors/";
   };
 
+  vim-mundo = buildVimPluginFrom2Nix {
+    pname = "vim-mundo";
+    version = "2020-05-06";
+    src = fetchFromGitHub {
+      owner = "simnalamburt";
+      repo = "vim-mundo";
+      rev = "046fc0664b953ab17153da379df0b9fd34b85ec1";
+      sha256 = "0np83qa95cfg1059r4iaf31sfhs86241jzkmw026gdja9s30q3m1";
+    };
+    meta.homepage = "https://github.com/simnalamburt/vim-mundo/";
+  };
+
   vim-nerdtree-tabs = buildVimPluginFrom2Nix {
     pname = "vim-nerdtree-tabs";
     version = "2018-12-21";
diff --git a/pkgs/misc/vim-plugins/vim-plugin-names b/pkgs/misc/vim-plugins/vim-plugin-names
index 530850f684f3..e22ddc50ddd1 100644
--- a/pkgs/misc/vim-plugins/vim-plugin-names
+++ b/pkgs/misc/vim-plugins/vim-plugin-names
@@ -442,6 +442,7 @@ Shougo/vimproc.vim
 Shougo/vimshell.vim
 shumphrey/fugitive-gitlab.vim
 sickill/vim-pasta
+simnalamburt/vim-mundo
 SirVer/ultisnips
 sjl/gundo.vim
 sjl/splice.vim

From c9db9df06488d0ac6d0e2fd8b0172437d00819e9 Mon Sep 17 00:00:00 2001
From: Jonathan Ringer <jonringer117@gmail.com>
Date: Tue, 2 Jun 2020 15:23:23 -0700
Subject: [PATCH 51/91] python3Packages.azure-mgmt-batch: 8.0.0 -> 9.0.0

---
 pkgs/development/python-modules/azure-mgmt-batch/default.nix | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/pkgs/development/python-modules/azure-mgmt-batch/default.nix b/pkgs/development/python-modules/azure-mgmt-batch/default.nix
index 19be6d28e170..5a1b7600ecfc 100644
--- a/pkgs/development/python-modules/azure-mgmt-batch/default.nix
+++ b/pkgs/development/python-modules/azure-mgmt-batch/default.nix
@@ -10,12 +10,12 @@
 
 buildPythonPackage rec {
   pname = "azure-mgmt-batch";
-  version = "8.0.0";
+  version = "9.0.0";
 
   src = fetchPypi {
     inherit pname version;
     extension = "zip";
-    sha256 = "228ea058361763a5a31273df7d813b9134d0ecff4567c533eb7e1afaf772fbc7";
+    sha256 = "03417eecfa1fac906e674cb1cb43ed7da27a96277277b091d7c389ba39f6c3fe";
   };
 
   propagatedBuildInputs = [

From 5bc75d726c6533a7d5d53399d6653b337dd20f66 Mon Sep 17 00:00:00 2001
From: Jonathan Ringer <jonringer117@gmail.com>
Date: Tue, 2 Jun 2020 15:23:23 -0700
Subject: [PATCH 52/91] python3Packages.azure-mgmt-hanaonazure: 0.13.0 ->
 0.14.0

---
 .../python-modules/azure-mgmt-hanaonazure/default.nix         | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/pkgs/development/python-modules/azure-mgmt-hanaonazure/default.nix b/pkgs/development/python-modules/azure-mgmt-hanaonazure/default.nix
index c23ebfc2ce9c..fd0c527344c0 100644
--- a/pkgs/development/python-modules/azure-mgmt-hanaonazure/default.nix
+++ b/pkgs/development/python-modules/azure-mgmt-hanaonazure/default.nix
@@ -10,12 +10,12 @@
 
 buildPythonPackage rec {
   pname = "azure-mgmt-hanaonazure";
-  version = "0.13.0";
+  version = "0.14.0";
 
   src = fetchPypi {
     inherit pname version;
     extension = "zip";
-    sha256 = "cc4058174e371a0b68b305cd5a082fcca47f3446dd9aefd9ada72da4bd637da9";
+    sha256 = "7f8b912ca62431c1697b4914c12cc5f8123e60ee6c65d123591f937744d204e0";
   };
 
   propagatedBuildInputs = [

From 91c5a18b172f8181346742340bd7fbfb83adcb47 Mon Sep 17 00:00:00 2001
From: Jonathan Ringer <jonringer117@gmail.com>
Date: Tue, 2 Jun 2020 15:23:24 -0700
Subject: [PATCH 53/91] python3Packages.azure-mgmt-imagebuilder: 0.3.0 -> 0.4.0

---
 .../python-modules/azure-mgmt-imagebuilder/default.nix        | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/pkgs/development/python-modules/azure-mgmt-imagebuilder/default.nix b/pkgs/development/python-modules/azure-mgmt-imagebuilder/default.nix
index f5b04c36b0d6..404caf4ebf5b 100644
--- a/pkgs/development/python-modules/azure-mgmt-imagebuilder/default.nix
+++ b/pkgs/development/python-modules/azure-mgmt-imagebuilder/default.nix
@@ -5,13 +5,13 @@
 }:
 
 buildPythonPackage rec {
-  version = "0.3.0";
+  version = "0.4.0";
   pname = "azure-mgmt-imagebuilder";
   disabled = isPy27;
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "0r4sxr3pbcci5qif1ip1lrix3cryj0b3asqch3zds4q705jiakc4";
+    sha256 = "4c9291bf16b40b043637e5e4f15650f71418ac237393e62219cab478a7951733";
     extension = "zip";
   };
 

From 13818375d8715d08cc21d062a28e2128d7568fbc Mon Sep 17 00:00:00 2001
From: Jonathan Ringer <jonringer117@gmail.com>
Date: Tue, 2 Jun 2020 15:23:24 -0700
Subject: [PATCH 54/91] python3Packages.azure-mgmt-loganalytics: 0.5.0 -> 0.6.0

---
 .../python-modules/azure-mgmt-loganalytics/default.nix        | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/pkgs/development/python-modules/azure-mgmt-loganalytics/default.nix b/pkgs/development/python-modules/azure-mgmt-loganalytics/default.nix
index eb4772ce5439..69c1aaffada3 100644
--- a/pkgs/development/python-modules/azure-mgmt-loganalytics/default.nix
+++ b/pkgs/development/python-modules/azure-mgmt-loganalytics/default.nix
@@ -11,12 +11,12 @@
 
 buildPythonPackage rec {
   pname = "azure-mgmt-loganalytics";
-  version = "0.5.0";
+  version = "0.6.0";
 
   src = fetchPypi {
     inherit pname version;
     extension = "zip";
-    sha256 = "16f4c4f676ea718b7e1c59bd9a516fcfc796f1aff844b183a7ce9afe69fb214d";
+    sha256 = "a1527fe8b1e8a47558bfa03bd6c587706d8fb9213142aea42da07397daa2d039";
   };
 
   propagatedBuildInputs = [

From cd4852a2a6c9296c65fe6a3563a4f7c34ad71c12 Mon Sep 17 00:00:00 2001
From: Jonathan Ringer <jonringer117@gmail.com>
Date: Tue, 2 Jun 2020 15:23:25 -0700
Subject: [PATCH 55/91] python3Packages.azure-mgmt-signalr: 0.3.0 -> 0.4.0

---
 .../development/python-modules/azure-mgmt-signalr/default.nix | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/pkgs/development/python-modules/azure-mgmt-signalr/default.nix b/pkgs/development/python-modules/azure-mgmt-signalr/default.nix
index 2ccb773c105a..8192064626ea 100644
--- a/pkgs/development/python-modules/azure-mgmt-signalr/default.nix
+++ b/pkgs/development/python-modules/azure-mgmt-signalr/default.nix
@@ -9,12 +9,12 @@
 
 buildPythonPackage rec {
   pname = "azure-mgmt-signalr";
-  version = "0.3.0";
+  version = "0.4.0";
 
   src = fetchPypi {
     inherit pname version;
     extension = "zip";
-    sha256 = "08b2i6wz9n13h77ahay1hvmg8abk2vvs7kn4y7xip9gi6ij8fv0a";
+    sha256 = "6503ddda9d6f4b634dfeb8eb4bcd14ede5e0900585f6c83bf9010cf82215c126";
   };
 
   propagatedBuildInputs = [

From 05f42b2a459049075553251561166ef233029e55 Mon Sep 17 00:00:00 2001
From: Jonathan Ringer <jonringer117@gmail.com>
Date: Tue, 2 Jun 2020 15:23:25 -0700
Subject: [PATCH 56/91] python3Packages.azure-servicebus: 0.50.2 -> 0.50.3

---
 pkgs/development/python-modules/azure-servicebus/default.nix | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/pkgs/development/python-modules/azure-servicebus/default.nix b/pkgs/development/python-modules/azure-servicebus/default.nix
index 02460b27952e..e58577577974 100644
--- a/pkgs/development/python-modules/azure-servicebus/default.nix
+++ b/pkgs/development/python-modules/azure-servicebus/default.nix
@@ -10,12 +10,12 @@
 
 buildPythonPackage rec {
   pname = "azure-servicebus";
-  version = "0.50.2";
+  version = "0.50.3";
 
   src = fetchPypi {
     inherit pname version;
     extension = "zip";
-    sha256 = "836649d510aa2b7467bc87d8dab18f2db917b63aa2fe8f3e5d0bb44011e465f5";
+    sha256 = "2b1e60c81fcf5b6a5bb3ceddb27f24543f479912e39a4706a390a16d8c0a71f4";
   };
 
   buildInputs = [

From eb0363119e0b6276591386ba02f3d97f183c7ddc Mon Sep 17 00:00:00 2001
From: Jonathan Ringer <jonringer117@gmail.com>
Date: Tue, 2 Jun 2020 17:36:04 -0700
Subject: [PATCH 57/91] azure-cli: 2.5.1 -> 2.7.0

---
 pkgs/tools/admin/azure-cli/default.nix        |  4 +-
 .../tools/admin/azure-cli/python-packages.nix | 39 ++++++++++---------
 2 files changed, 23 insertions(+), 20 deletions(-)

diff --git a/pkgs/tools/admin/azure-cli/default.nix b/pkgs/tools/admin/azure-cli/default.nix
index 942346bc1a73..4cfe1beb2cdc 100644
--- a/pkgs/tools/admin/azure-cli/default.nix
+++ b/pkgs/tools/admin/azure-cli/default.nix
@@ -1,12 +1,12 @@
 { stdenv, lib, python, fetchFromGitHub, installShellFiles }:
 
 let
-  version = "2.5.1";
+  version = "2.7.0";
   src = fetchFromGitHub {
     owner = "Azure";
     repo = "azure-cli";
     rev = "azure-cli-${version}";
-    sha256 = "129v01da0whayqi9nvrfnlrq10mn5j096k43xl72214nk7iliwfy";
+    sha256 = "0g0ddg04pwcsmyyzrqllx4ladw4x5zxc5yw29q8f6q59j6jaf1zb";
   };
 
   # put packages that needs to be overriden in the py package scope
diff --git a/pkgs/tools/admin/azure-cli/python-packages.nix b/pkgs/tools/admin/azure-cli/python-packages.nix
index 61633c1bbdc0..157da72a73b5 100644
--- a/pkgs/tools/admin/azure-cli/python-packages.nix
+++ b/pkgs/tools/admin/azure-cli/python-packages.nix
@@ -157,8 +157,8 @@ let
       azure-mgmt-core = overrideAzureMgmtPackage super.azure-mgmt-core "1.0.0" "zip"
         "0pm565v05480f672l0n8z2sg6zk6iqyi91n0dhscibhdl54sy3si";
 
-      azure-mgmt-cosmosdb = overrideAzureMgmtPackage super.azure-mgmt-cosmosdb "0.13.0" "zip"
-        "160cn4arl4dy6ax1zb64bzw0ygmpg8jc942m1zlh4nwx5x322gg8";
+      azure-mgmt-cosmosdb = overrideAzureMgmtPackage super.azure-mgmt-cosmosdb "0.14.0" "zip"
+        "1af2vigpmcg2mp36dqi9g2dx4589bqm4w2af9dx6l9x65zfl89b9";
 
       azure-mgmt-deploymentmanager = overrideAzureMgmtPackage super.azure-mgmt-deploymentmanager "0.2.0" "zip"
         "0c6pyr36n9snx879vas5r6l25db6nlp2z96xn759mz4kg4i45qs6";
@@ -166,8 +166,8 @@ let
       azure-mgmt-imagebuilder = overrideAzureMgmtPackage super.azure-mgmt-imagebuilder "0.2.1" "zip"
         "0mwlvy4x5nr3hsz7wdpdhpzwarzzwz4225bfpd68hr0pcjgzspky";
 
-      azure-mgmt-iothub = overrideAzureMgmtPackage super.azure-mgmt-iothub "0.11.0" "zip"
-        "11887zf61ji1dh62czrsgxwz8idybw93m6iwahjy777jkdyviyzn";
+      azure-mgmt-iothub = overrideAzureMgmtPackage super.azure-mgmt-iothub "0.12.0" "zip"
+        "187z0w5by7d9a2zsz3kidmzjw591akpc6dwhps4jyb4skcmyw86s";
 
       azure-mgmt-iotcentral = overrideAzureMgmtPackage super.azure-mgmt-iotcentral "3.0.0" "zip"
         "0iq04hvivq3fvg2lhax95gx0x35avk5hps42227z3qna5i2cznpn";
@@ -175,8 +175,8 @@ let
       azure-mgmt-kusto = overrideAzureMgmtPackage super.azure-mgmt-kusto "0.3.0" "zip"
         "1pmcdgimd66h964a3d5m2j2fbydshcwhrk87wblhwhfl3xwbgf4y";
 
-      azure-mgmt-devtestlabs = overrideAzureMgmtPackage super.azure-mgmt-devtestlabs "2.2.0" "zip"
-        "15lpyv9z8ss47rjmg1wx5akh22p9br2vckaj7jk3639vi38ac5nl";
+      azure-mgmt-devtestlabs = overrideAzureMgmtPackage super.azure-mgmt-devtestlabs "4.0.0" "zip"
+        "1397ksrd61jv7400mgn8sqngp6ahir55fyq9n5k69wk88169qm2r";
 
       azure-mgmt-netapp = overrideAzureMgmtPackage super.azure-mgmt-netapp "0.8.0" "zip"
         "0vbg5mpahrnnnbj80flgzxxiffic94wsc9srm4ir85y2j5rprpv7";
@@ -184,20 +184,20 @@ let
       azure-mgmt-dns = overrideAzureMgmtPackage super.azure-mgmt-dns "2.1.0" "zip"
         "1l55py4fzzwhxlmnwa41gpmqk9v2ncc79w7zq11sm9a5ynrv2c1p";
 
-      azure-mgmt-loganalytics = overrideAzureMgmtPackage super.azure-mgmt-loganalytics "0.5.0" "zip"
-        "0k91zdlzx6nfly1v2i7qmzqrdiygdx8rmgar3iz8nwgafvvc9x0n";
+      azure-mgmt-loganalytics = overrideAzureMgmtPackage super.azure-mgmt-loganalytics "0.6.0" "zip"
+        "0ffhlbd9fwx05njawhii46wqyvbhhz2xcfx0pxc7b978n7l7ylm1";
 
-      azure-mgmt-network = overrideAzureMgmtPackage super.azure-mgmt-network "10.1.0" "zip"
-        "0fmsdwzyn167lwh87yyadq1bdc4q6rfz3gj5bh1mgavi9ghhxb75";
+      azure-mgmt-network = overrideAzureMgmtPackage super.azure-mgmt-network "10.2.0" "zip"
+        "1nd2rcwl83x3xq4h5brb16jwbbq57gyxz6pgvmhnign9q76p836m";
 
-      azure-mgmt-media = overrideAzureMgmtPackage super.azure-mgmt-media "1.1.1" "zip"
-        "16wk0ksycrscsn3n14qk4vvf7i567vq6f96lwf5dwbc81wx6n32x";
+      azure-mgmt-media = overrideAzureMgmtPackage super.azure-mgmt-media "2.1.0" "zip"
+        "1py0hch0wghzfxazdrrs7p0kln2zn9jh3fmkzwd2z8qggj38q6gm";
 
       azure-mgmt-msi = overrideAzureMgmtPackage super.azure-mgmt-msi "0.2.0" "zip"
         "0rvik03njz940x2hvqg6iiq8k0d88gyygsr86w8s0sa12sdbq8l6";
 
-      azure-mgmt-web = overrideAzureMgmtPackage super.azure-mgmt-web "0.44.0" "zip"
-        "05dqakhfi301k2jnvccxdkigqvwnf9xz858pqg9vsri3dq69f1rw";
+      azure-mgmt-web = overrideAzureMgmtPackage super.azure-mgmt-web "0.46.0" "zip"
+        "19n4cr8a2fwjks3485rkv31bsib9akah5b289sl5lsqyp6i8m671";
 
       azure-mgmt-redhatopenshift = overrideAzureMgmtPackage super.azure-mgmt-redhatopenshift "0.1.0" "zip"
         "1g65lbia1i1jw6qkyjz2ldyl3p90rbr78l8kfryg70sj7z3gnnjn";
@@ -211,6 +211,9 @@ let
       azure-mgmt-security = overrideAzureMgmtPackage super.azure-mgmt-security "0.1.0" "zip"
         "1cb466722bs0ribrirb32kc299716pl0pwivz3jyn40dd78cwhhx";
 
+      azure-mgmt-signalr = overrideAzureMgmtPackage super.azure-mgmt-signalr "0.3.0" "zip"
+        "08b2i6wz9n13h77ahay1hvmg8abk2vvs7kn4y7xip9gi6ij8fv0a";
+
       azure-mgmt-sql = overrideAzureMgmtPackage super.azure-mgmt-sql "0.18.0" "zip"
         "0i9lnhcx85xccddvz1wdz5j0idm6sw2cn3066dww5993nmg0ijlr";
 
@@ -232,8 +235,8 @@ let
       azure-mgmt-cdn = overrideAzureMgmtPackage super.azure-mgmt-cdn "4.1.0rc1" "zip"
         "00q5723gvc57kg2w1iyhfchp018skwd89ibrw23p7ngm2bb76g45";
 
-      azure-mgmt-containerregistry = overrideAzureMgmtPackage super.azure-mgmt-containerregistry "3.0.0rc11" "zip"
-        "1ixh2wmrbm1v2xlrnmy1l513jpqch6b5vyh9x77flm649x1cff2q";
+      azure-mgmt-containerregistry = overrideAzureMgmtPackage super.azure-mgmt-containerregistry "3.0.0rc12" "zip"
+        "0q7w26n53x0lvr1a944jjl9d0yn0l029brx5nzfrz7ydf3jpb2i2";
 
       azure-mgmt-monitor = overrideAzureMgmtPackage super.azure-mgmt-monitor "0.9.0" "zip"
         "170jyr1qzwhv5ihyrsg5d8qzjylqmg31dscd31jzi4i7bwqf3sb8";
@@ -320,12 +323,12 @@ let
       });
 
       knack = super.knack.overridePythonAttrs(oldAttrs: rec {
-        version = "0.7.0rc4";
+        version = "0.7.1";
 
         src = super.fetchPypi {
           inherit (oldAttrs) pname;
           inherit version;
-          sha256 = "10v6qjpr7sbq5irq3kz24jiivpfm0f7jbj9iyx4dm8fgkrhgzlb6";
+          sha256 = "1z50vf0q7kzg3cq9cr24j43ri6wc76dhhklyc9lpvgjf2r061vzw";
         };
       });
 

From 21c43f6e7530563534b34bce0eb723c9cbcca8b0 Mon Sep 17 00:00:00 2001
From: Jonathan Ringer <jonringer117@gmail.com>
Date: Tue, 2 Jun 2020 17:50:33 -0700
Subject: [PATCH 58/91] python3Packages.azure-servicebus: add imports check

---
 pkgs/development/python-modules/azure-servicebus/default.nix | 3 +++
 1 file changed, 3 insertions(+)

diff --git a/pkgs/development/python-modules/azure-servicebus/default.nix b/pkgs/development/python-modules/azure-servicebus/default.nix
index e58577577974..2a3552d1fb5f 100644
--- a/pkgs/development/python-modules/azure-servicebus/default.nix
+++ b/pkgs/development/python-modules/azure-servicebus/default.nix
@@ -29,6 +29,9 @@ buildPythonPackage rec {
   # has no tests
   doCheck = false;
 
+  # python2 will fail due to pep 420
+  pythonImportsCheck = lib.optionals isPy3k [ "azure.servicebus" ];
+
   meta = with lib; {
     description = "This is the Microsoft Azure Service Bus Client Library";
     homepage = "https://github.com/Azure/azure-sdk-for-python";

From 3f529586cabc4b32a3d367f5b777983f072fd91a Mon Sep 17 00:00:00 2001
From: Jonathan Ringer <jonringer117@gmail.com>
Date: Tue, 2 Jun 2020 17:51:31 -0700
Subject: [PATCH 59/91] python3Packages.uamqp: 1.2.7 -> 1.2.8

---
 pkgs/development/python-modules/uamqp/default.nix | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/pkgs/development/python-modules/uamqp/default.nix b/pkgs/development/python-modules/uamqp/default.nix
index 35ef67326ce7..e1527ea27e69 100644
--- a/pkgs/development/python-modules/uamqp/default.nix
+++ b/pkgs/development/python-modules/uamqp/default.nix
@@ -11,11 +11,11 @@
 
 buildPythonPackage rec {
   pname = "uamqp";
-  version = "1.2.7";
+  version = "1.2.8";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "d5ac4f6e66baf466cb1c5e00d52f5da3a42bf811724522475b7e2125fbae4aae";
+    sha256 = "12yq435h27iv1kzgq3gl7c7hxdivvc2sl0l1kslgf2wxw53n7jgj";
   };
 
   buildInputs = [

From 38f5fce48aa30e81e99f86543694bae0fd1db52c Mon Sep 17 00:00:00 2001
From: Benjamin Saunders <ben.e.saunders@gmail.com>
Date: Sat, 7 Mar 2020 19:03:14 -0800
Subject: [PATCH 60/91] linuxPackages.rtl88x2bu: init at 2020-05-19

---
 pkgs/os-specific/linux/rtl88x2bu/default.nix | 38 ++++++++++++++++++++
 pkgs/top-level/all-packages.nix              |  2 ++
 2 files changed, 40 insertions(+)
 create mode 100644 pkgs/os-specific/linux/rtl88x2bu/default.nix

diff --git a/pkgs/os-specific/linux/rtl88x2bu/default.nix b/pkgs/os-specific/linux/rtl88x2bu/default.nix
new file mode 100644
index 000000000000..3d461d525567
--- /dev/null
+++ b/pkgs/os-specific/linux/rtl88x2bu/default.nix
@@ -0,0 +1,38 @@
+{ stdenv, fetchFromGitHub, kernel, bc }:
+
+stdenv.mkDerivation rec {
+  name = "rtl88x2bu-${kernel.version}-${version}";
+  version = "unstable-2020-05-19";
+
+  src = fetchFromGitHub {
+    owner = "cilynx";
+    repo = "rtl88x2BU";
+    rev = "0f159d7cd937a12b818121cb1f1c4910bd1adc72";
+    sha256 = "0flqnvzfdb4wsiiqv9vf5gfwd5fgpjvhs9zhqknnv1cmp8msgw6y";
+  };
+
+  hardeningDisable = [ "pic" ];
+
+  nativeBuildInputs = [ bc ];
+  buildInputs = kernel.moduleBuildDependencies;
+
+  prePatch = ''
+    substituteInPlace ./Makefile \
+      --replace /lib/modules/ "${kernel.dev}/lib/modules/" \
+      --replace '$(shell uname -r)' "${kernel.modDirVersion}" \
+      --replace /sbin/depmod \# \
+      --replace '$(MODDESTDIR)' "$out/lib/modules/${kernel.modDirVersion}/kernel/net/wireless/"
+  '';
+
+  preInstall = ''
+    mkdir -p "$out/lib/modules/${kernel.modDirVersion}/kernel/net/wireless/"
+  '';
+
+  meta = with stdenv.lib; {
+    description = "Realtek rtl88x2bu driver";
+    homepage = "https://github.com/cilynx/rtl88x2bu";
+    license = licenses.gpl2;
+    platforms = platforms.linux;
+    maintainers = [ maintainers.ralith ];
+  };
+}
diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix
index acf8fbec823a..68dfe4d18b9b 100644
--- a/pkgs/top-level/all-packages.nix
+++ b/pkgs/top-level/all-packages.nix
@@ -17039,6 +17039,8 @@ in
 
     rtl8821ce = callPackage ../os-specific/linux/rtl8821ce { };
 
+    rtl88x2bu = callPackage ../os-specific/linux/rtl88x2bu { };
+
     rtlwifi_new = callPackage ../os-specific/linux/rtlwifi_new { };
 
     openafs = callPackage ../servers/openafs/1.6/module.nix { };

From 86990d60071a3be8ea25d2ad2f79a0ba096331b6 Mon Sep 17 00:00:00 2001
From: Benjamin Hipple <bhipple@protonmail.com>
Date: Thu, 4 Jun 2020 17:24:31 -0400
Subject: [PATCH 61/91] pythonPackages.wtforms: 2.1 -> 2.3.1

2.1 is from 2015!
https://github.com/wtforms/wtforms/blob/master/CHANGES.rst
---
 .../python-modules/wtforms/default.nix         | 18 +++++++++---------
 1 file changed, 9 insertions(+), 9 deletions(-)

diff --git a/pkgs/development/python-modules/wtforms/default.nix b/pkgs/development/python-modules/wtforms/default.nix
index 98c3b1be93b5..410abbbb622b 100644
--- a/pkgs/development/python-modules/wtforms/default.nix
+++ b/pkgs/development/python-modules/wtforms/default.nix
@@ -1,29 +1,29 @@
 { stdenv
 , buildPythonPackage
 , fetchPypi
-, Babel
+, markupsafe
 }:
 
 buildPythonPackage rec {
-  version = "2.1";
-  pname = "wtforms";
+  version = "2.3.1";
+  pname = "WTForms";
 
   src = fetchPypi {
     inherit pname version;
-    extension = "zip";
-    sha256 = "0vyl26y9cg409cfyj8rhqxazsdnd0jipgjw06civhrd53yyi1pzz";
+    sha256 = "0whrd9cqhlibm31yqhvhp9illddxf0cpgcn3v806f7ajmsri66l6";
   };
 
+  propagatedBuildInputs = [ markupsafe ];
+
   # Django tests are broken "django.core.exceptions.AppRegistryNotReady: Apps aren't loaded yet."
-  # This is fixed in master I believe but not yet in 2.1;
   doCheck = false;
 
-  propagatedBuildInputs = [ Babel ];
-
   meta = with stdenv.lib; {
-    homepage = "https://github.com/wtforms/wtforms";
     description = "A flexible forms validation and rendering library for Python";
+    homepage = "https://github.com/wtforms/wtforms";
+    changelog = "https://github.com/wtforms/wtforms/blob/${version}/CHANGES.rst";
     license = licenses.bsd3;
+    maintainers = [ maintainers.bhipple ];
   };
 
 }

From 50a5e5597a33f40567f2592ab7c59bb9856fab7b Mon Sep 17 00:00:00 2001
From: Ben Wolsieffer <benwolsieffer@gmail.com>
Date: Sat, 18 Apr 2020 16:01:30 -0400
Subject: [PATCH 62/91] nixos/stage-1: make boot.initrd.secrets appear in the
 manual

---
 nixos/modules/system/boot/stage-1.nix | 3 +--
 1 file changed, 1 insertion(+), 2 deletions(-)

diff --git a/nixos/modules/system/boot/stage-1.nix b/nixos/modules/system/boot/stage-1.nix
index dfd158e2d75f..9bf3228d1ad6 100644
--- a/nixos/modules/system/boot/stage-1.nix
+++ b/nixos/modules/system/boot/stage-1.nix
@@ -517,8 +517,7 @@ in
     };
 
     boot.initrd.secrets = mkOption
-      { internal = true;
-        default = {};
+      { default = {};
         type = types.attrsOf (types.nullOr types.path);
         description =
           ''

From dfd6f3de1954fa1ba69fffe42101e1d95141388b Mon Sep 17 00:00:00 2001
From: Jan Tojnar <jtojnar@gmail.com>
Date: Thu, 4 Jun 2020 23:25:54 +0200
Subject: [PATCH 63/91] liferea: Format with nixpkgs-fmt

* Format with nixpkgs-fmt
* Replace pkgconfig alias with pkg-config
* Remove duplicate gsettings-desktop-schemas
---
 .../newsreaders/liferea/default.nix           | 61 ++++++++++++++++---
 1 file changed, 51 insertions(+), 10 deletions(-)

diff --git a/pkgs/applications/networking/newsreaders/liferea/default.nix b/pkgs/applications/networking/newsreaders/liferea/default.nix
index 816e00447a00..ddea4754c53b 100644
--- a/pkgs/applications/networking/newsreaders/liferea/default.nix
+++ b/pkgs/applications/networking/newsreaders/liferea/default.nix
@@ -1,7 +1,25 @@
-{ stdenv, fetchurl, pkgconfig, intltool, python3Packages, wrapGAppsHook
-, glib, libxml2, libxslt, sqlite, libsoup , webkitgtk, json-glib, gst_all_1
-, libnotify, gtk3, gsettings-desktop-schemas, libpeas, dconf, librsvg
-, gobject-introspection, glib-networking
+{ stdenv
+, fetchurl
+, pkg-config
+, intltool
+, python3Packages
+, wrapGAppsHook
+, glib
+, libxml2
+, libxslt
+, sqlite
+, libsoup
+, webkitgtk
+, json-glib
+, gst_all_1
+, libnotify
+, gtk3
+, gsettings-desktop-schemas
+, libpeas
+, dconf
+, librsvg
+, gobject-introspection
+, glib-networking
 }:
 
 stdenv.mkDerivation rec {
@@ -13,17 +31,40 @@ stdenv.mkDerivation rec {
     sha256 = "03pr1gmiv5y0i92bkhcxr8s311ll91chz19wb96jkixx32xav91d";
   };
 
-  nativeBuildInputs = [ wrapGAppsHook python3Packages.wrapPython intltool pkgconfig ];
+  nativeBuildInputs = [
+    wrapGAppsHook
+    python3Packages.wrapPython
+    intltool
+    pkg-config
+  ];
 
   buildInputs = [
-    glib gtk3 webkitgtk libxml2 libxslt sqlite libsoup gsettings-desktop-schemas
-    libpeas gsettings-desktop-schemas json-glib dconf gobject-introspection
-    librsvg glib-networking libnotify
+    glib
+    gtk3
+    webkitgtk
+    libxml2
+    libxslt
+    sqlite
+    libsoup
+    libpeas
+    gsettings-desktop-schemas
+    json-glib
+    dconf
+    gobject-introspection
+    librsvg
+    glib-networking
+    libnotify
   ] ++ (with gst_all_1; [
-    gstreamer gst-plugins-base gst-plugins-good gst-plugins-bad
+    gstreamer
+    gst-plugins-base
+    gst-plugins-good
+    gst-plugins-bad
   ]);
 
-  pythonPath = with python3Packages; [ pygobject3 pycairo ];
+  pythonPath = with python3Packages; [
+    pygobject3
+    pycairo
+  ];
 
   preFixup = ''
     buildPythonPath "$out $pythonPath"

From d67e2a27020c373c9bb420bd1e2bf5feef02c135 Mon Sep 17 00:00:00 2001
From: Jan Tojnar <jtojnar@gmail.com>
Date: Fri, 5 Jun 2020 00:01:31 +0200
Subject: [PATCH 64/91] liferea: Update dependencies

dconf & librsvg are indirect and will be already available through wrapGAppsHook.
libsecret replaces gnome-secret and is required for the keyring plug-in.

Closes: https://github.com/NixOS/nixpkgs/issues/39650
---
 .../applications/networking/newsreaders/liferea/default.nix | 6 ++----
 1 file changed, 2 insertions(+), 4 deletions(-)

diff --git a/pkgs/applications/networking/newsreaders/liferea/default.nix b/pkgs/applications/networking/newsreaders/liferea/default.nix
index ddea4754c53b..2632acd73d35 100644
--- a/pkgs/applications/networking/newsreaders/liferea/default.nix
+++ b/pkgs/applications/networking/newsreaders/liferea/default.nix
@@ -16,8 +16,7 @@
 , gtk3
 , gsettings-desktop-schemas
 , libpeas
-, dconf
-, librsvg
+, libsecret
 , gobject-introspection
 , glib-networking
 }:
@@ -49,9 +48,8 @@ stdenv.mkDerivation rec {
     libpeas
     gsettings-desktop-schemas
     json-glib
-    dconf
     gobject-introspection
-    librsvg
+    libsecret
     glib-networking
     libnotify
   ] ++ (with gst_all_1; [

From f71d9240b00fe7d34cb8b1acaf2118b6081e2e0d Mon Sep 17 00:00:00 2001
From: Florian Klink <flokli@flokli.de>
Date: Thu, 4 Jun 2020 22:56:56 +0200
Subject: [PATCH 65/91] buildbot: 2.7.0 -> 2.8.0
MIME-Version: 1.0
Content-Type: text/plain; charset=UTF-8
Content-Transfer-Encoding: 8bit

```
Bug fixes

    Fix GitHubEventHandler to include files in Change that comes from a github PR (issue # 5294)
    Updated the Docker container buildbot-master to Alpine 3.11 to fix segmentation faults caused by an old version of musl
    Base64 encoding logs and attachments sent via email so emails conform to RFC 5322 2.1.1
    Handling the case where the BitbucketStatusPush return code is not 200
    When cancelling a buildrequest, the reason field is now correctly transmitted all the way to the cancelled step.
    Fix Cache-control header to be compliant with RFC 7234 (issue # 5220)
    Fix GerritEventLogPoller class to be declared as entry_point (can be used in master.cfg file)
    Git poller: add –ignore-missing argument to git log call to avoid fatal: bad object errors
    Log watcher looks for the “tail” utility in the right location on Haiku OS.
    Add limit and filtering support for the changes data API as described in issue # 5207

Improved Documentation

    Make docs build with the latest sphinx and improve rendering of the example HTML file for custom dashboard
    Make docs build with Sphinx 3 and fix some typos and incorrect Python module declarations

Features

    Property and Interpolate objects can now be compared. This will generate a renderable that will be evaluated at runtime. see Renderable Comparison.
    Added argument count to lock access to allow a lock to consume a variable amount of units
    Added arguments pollRandomDelayMin and pollRandomDelayMax to HgPoller, GitPoller, P4Poller, SvnPoller to spread the polling load
```
---
 .../python-modules/buildbot/default.nix           | 15 ++++++++++-----
 pkgs/development/python-modules/buildbot/pkg.nix  |  4 ++--
 .../python-modules/buildbot/plugins.nix           | 10 +++++-----
 .../python-modules/buildbot/worker.nix            |  4 ++--
 4 files changed, 19 insertions(+), 14 deletions(-)

diff --git a/pkgs/development/python-modules/buildbot/default.nix b/pkgs/development/python-modules/buildbot/default.nix
index b088480f5de4..f9a73d248315 100644
--- a/pkgs/development/python-modules/buildbot/default.nix
+++ b/pkgs/development/python-modules/buildbot/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, lib, buildPythonPackage, fetchPypi, fetchpatch, makeWrapper, isPy3k,
+{ stdenv, lib, buildPythonPackage, fetchFromGitHub, fetchpatch, makeWrapper, isPy3k,
   python, twisted, jinja2, zope_interface, future, sqlalchemy,
   sqlalchemy_migrate, dateutil, txaio, autobahn, pyjwt, pyyaml, treq,
   txrequests, pyjade, boto3, moto, mock, python-lz4, setuptoolsTrial,
@@ -25,12 +25,17 @@ let
 
   package = buildPythonPackage rec {
     pname = "buildbot";
-    version = "2.7.0";
+    version = "2.8.0";
 
-    src = fetchPypi {
-      inherit pname version;
-      sha256 = "0jj8fh611n7xc3vsfbgpqsllp38cfj3spkr2kz3ara2x7jvh3406";
+    # tests fail with the 2.8.0 sdist, so fetchFromGitHub instead
+    # https://github.com/buildbot/buildbot/pull/5322
+    src = fetchFromGitHub {
+      owner = "buildbot";
+      repo = "buildbot";
+      rev = "v${version}";
+      sha256 = "0akd61mgjp53c3vyf2yyzd0xf0cjwpvsi7g8pz72xrvnil1s4w7k";
     };
+    sourceRoot = "./source/master";
 
     propagatedBuildInputs = [
       # core
diff --git a/pkgs/development/python-modules/buildbot/pkg.nix b/pkgs/development/python-modules/buildbot/pkg.nix
index cb3124ec7e38..12a7e99984f7 100644
--- a/pkgs/development/python-modules/buildbot/pkg.nix
+++ b/pkgs/development/python-modules/buildbot/pkg.nix
@@ -2,11 +2,11 @@
 
 buildPythonPackage rec {
   pname = "buildbot-pkg";
-  version = "2.7.0";
+  version = "2.8.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "03zb09r8w8dvd9qas7h6gdwlqc7q482ikph6h3708lpnkn72xdkb";
+    sha256 = "09sf36h8q8wrp0n57nb9915k86qdjyjj4xpdzy8q4s9z121iw0xz";
   };
 
   postPatch = ''
diff --git a/pkgs/development/python-modules/buildbot/plugins.nix b/pkgs/development/python-modules/buildbot/plugins.nix
index cd35f14fb37d..abb5d356540b 100644
--- a/pkgs/development/python-modules/buildbot/plugins.nix
+++ b/pkgs/development/python-modules/buildbot/plugins.nix
@@ -7,7 +7,7 @@
 
     src = fetchPypi {
       inherit pname version;
-      sha256 = "1d8xdk4rq4p3fw03cvz7d1pmpjjbyrnzzjifzv46q88vk7jakgxi";
+      sha256 = "1xq7pqvvsvgd2n38yzk0bqx943ldxsldrdcldwjshazq831rbdbn";
     };
 
     # Remove unneccessary circular dependency on buildbot
@@ -34,7 +34,7 @@
 
     src = fetchPypi {
       inherit pname version;
-      sha256 = "03pl75avi6cmmhjvfn0a0b4drn35yv37kvgn04zjdwa3m6p3haa8";
+      sha256 = "0ixq8x845glnykpab2z0vhwp69nbw98mg0df34kf32wjvm8j6kjh";
     };
 
     buildInputs = [ buildbot-pkg ];
@@ -56,7 +56,7 @@
 
     src = fetchPypi {
       inherit pname version;
-      sha256 = "0rzjk3qmlvid8qag3r00zaszchncl1nl8l2yapvc1zqh2dqlln58";
+      sha256 = "1gn0amv8l0n0ny1x78g8x4rpfsnhcs9gkws2zw3nx78y4pbs6lw5";
     };
 
     buildInputs = [ buildbot-pkg ];
@@ -78,7 +78,7 @@
 
     src = fetchPypi {
       inherit pname version;
-      sha256 = "1n4j73y9kwfqk7dz1fh1bpan68vlpnbz7idxpmsphyay8w8y9dd4";
+      sha256 = "04c0m4liyl4aaksq9x8wncasacfv0vgl0igafnhf440cf9lhkkwy";
     };
 
     buildInputs = [ buildbot-pkg ];
@@ -100,7 +100,7 @@
 
     src = fetchPypi {
       inherit pname version;
-      sha256 = "1babkcgxczs6zfk2b6jmsy2vwbrgdydrp2px1mfwa3wmv8fwlssg";
+      sha256 = "0c7lr4q3dvz3zhbnsvs2chsc6yn2jh10dnh1y66axdxk8hpqs3nc";
     };
 
     buildInputs = [ buildbot-pkg ];
diff --git a/pkgs/development/python-modules/buildbot/worker.nix b/pkgs/development/python-modules/buildbot/worker.nix
index 365ca0bcf14a..4f77fb7ae069 100644
--- a/pkgs/development/python-modules/buildbot/worker.nix
+++ b/pkgs/development/python-modules/buildbot/worker.nix
@@ -3,11 +3,11 @@
 
 buildPythonPackage (rec {
   pname = "buildbot-worker";
-  version = "2.7.0";
+  version = "2.8.0";
 
   src = fetchPypi {
     inherit pname version;
-    sha256 = "1vwy46acvczgk1hhpsqdwpcw55j4hm5pkw6j01f92axiga8r5jk6";
+    sha256 = "19pabha9jh3jnz9micfn5y4khnx4q6g1zc27wvfw6663mw6spykx";
   };
 
   propagatedBuildInputs = [ twisted future ];

From 14eceb59915d52e9bdcfa832d98b68f7c64db2f0 Mon Sep 17 00:00:00 2001
From: Ben Wolsieffer <benwolsieffer@gmail.com>
Date: Tue, 27 Mar 2018 19:57:52 -0400
Subject: [PATCH 66/91] nixos/grub: support initrd secrets

---
 nixos/doc/manual/release-notes/rl-2009.xml    | 14 ++++++++
 .../modules/system/boot/loader/grub/grub.nix  | 35 ++++++++++--------
 .../system/boot/loader/grub/install-grub.pl   | 36 ++++++++++++-------
 3 files changed, 58 insertions(+), 27 deletions(-)

diff --git a/nixos/doc/manual/release-notes/rl-2009.xml b/nixos/doc/manual/release-notes/rl-2009.xml
index e17e8ac24d13..115f9ebc5654 100644
--- a/nixos/doc/manual/release-notes/rl-2009.xml
+++ b/nixos/doc/manual/release-notes/rl-2009.xml
@@ -441,6 +441,20 @@ systemd.services.nginx.serviceConfig.ReadWritePaths = [ "/var/www" ];
        recommended to only use lower-case characters.
      </para>
    </listitem>
+   <listitem>
+    <para>
+     The GRUB specific option <option>boot.loader.grub.extraInitrd</option>
+     has been replaced with the generic option
+     <option>boot.initrd.secrets</option>. This option creates a secondary
+     initrd from the specified files, rather than using a manually created
+     initrd file.
+
+     Due to an existing bug with <option>boot.loader.grub.extraInitrd</option>,
+     it is not possible to directly boot an older generation that used that
+     option. It is still possible to rollback to that generation if the required
+     initrd file has not been deleted.
+    </para>
+   </listitem>
   </itemizedlist>
  </section>
 
diff --git a/nixos/modules/system/boot/loader/grub/grub.nix b/nixos/modules/system/boot/loader/grub/grub.nix
index c775632a4aa0..67e8bf6fd654 100644
--- a/nixos/modules/system/boot/loader/grub/grub.nix
+++ b/nixos/modules/system/boot/loader/grub/grub.nix
@@ -60,7 +60,7 @@ let
       inherit (efi) canTouchEfiVariables;
       inherit (cfg)
         version extraConfig extraPerEntryConfig extraEntries forceInstall useOSProber
-        extraEntriesBeforeNixOS extraPrepareConfig extraInitrd configurationLimit copyKernels
+        extraEntriesBeforeNixOS extraPrepareConfig configurationLimit copyKernels
         default fsIdentifier efiSupport efiInstallAsRemovable gfxmodeEfi gfxmodeBios gfxpayloadEfi gfxpayloadBios;
       path = with pkgs; makeBinPath (
         [ coreutils gnused gnugrep findutils diffutils btrfs-progs utillinux mdadm ]
@@ -292,19 +292,6 @@ in
         '';
       };
 
-      extraInitrd = mkOption {
-        type = types.nullOr types.path;
-        default = null;
-        example = "/boot/extra_initramfs.gz";
-        description = ''
-          The path to a second initramfs to be supplied to the kernel.
-          This ramfs will not be copied to the store, so that it can
-          contain secrets such as LUKS keyfiles or ssh keys.
-          This implies that rolling back to a previous configuration
-          won't rollback the state of this file.
-        '';
-      };
-
       useOSProber = mkOption {
         default = false;
         type = types.bool;
@@ -608,6 +595,8 @@ in
         { path = "/boot"; inherit (cfg) devices; inherit (efi) efiSysMountPoint; }
       ];
 
+      boot.loader.supportsInitrdSecrets = true;
+
       system.build.installBootLoader =
         let
           install-grub-pl = pkgs.substituteAll {
@@ -705,6 +694,24 @@ in
       (mkRenamedOptionModule [ "boot" "grubDevice" ] [ "boot" "loader" "grub" "device" ])
       (mkRenamedOptionModule [ "boot" "bootMount" ] [ "boot" "loader" "grub" "bootDevice" ])
       (mkRenamedOptionModule [ "boot" "grubSplashImage" ] [ "boot" "loader" "grub" "splashImage" ])
+      (mkRemovedOptionModule [ "boot" "loader" "grub" "extraInitrd" ] ''
+        This option has been replaced with the bootloader agnostic
+        boot.initrd.secrets option. To migrate to the initrd secrets system,
+        extract the extraInitrd archive into your main filesystem:
+
+          # zcat /boot/extra_initramfs.gz | cpio -idvmD /etc/secrets/initrd
+          /path/to/secret1
+          /path/to/secret2
+
+        then replace boot.loader.grub.extraInitrd with boot.initrd.secrets:
+
+          boot.initrd.secrets = {
+            "/path/to/secret1" = "/etc/secrets/initrd/path/to/secret1";
+            "/path/to/secret2" = "/etc/secrets/initrd/path/to/secret2";
+          };
+
+        See the boot.initrd.secrets option documentation for more information.
+      '')
     ];
 
 }
diff --git a/nixos/modules/system/boot/loader/grub/install-grub.pl b/nixos/modules/system/boot/loader/grub/install-grub.pl
index 8df18cbd9013..e469b18abd09 100644
--- a/nixos/modules/system/boot/loader/grub/install-grub.pl
+++ b/nixos/modules/system/boot/loader/grub/install-grub.pl
@@ -49,7 +49,6 @@ my $extraPrepareConfig = get("extraPrepareConfig");
 my $extraPerEntryConfig = get("extraPerEntryConfig");
 my $extraEntries = get("extraEntries");
 my $extraEntriesBeforeNixOS = get("extraEntriesBeforeNixOS") eq "true";
-my $extraInitrd = get("extraInitrd");
 my $splashImage = get("splashImage");
 my $splashMode = get("splashMode");
 my $backgroundColor = get("backgroundColor");
@@ -232,13 +231,6 @@ my $grubStore;
 if ($copyKernels == 0) {
     $grubStore = GrubFs($storePath);
 }
-my $extraInitrdPath;
-if ($extraInitrd) {
-    if (! -f $extraInitrd) {
-        print STDERR "Warning: the specified extraInitrd " . $extraInitrd . " doesn't exist. Your system won't boot without it.\n";
-    }
-    $extraInitrdPath = GrubFs($extraInitrd);
-}
 
 # Generate the header.
 my $conf .= "# Automatically generated.  DO NOT EDIT THIS FILE!\n";
@@ -363,9 +355,30 @@ sub addEntry {
 
     my $kernel = copyToKernelsDir(Cwd::abs_path("$path/kernel"));
     my $initrd = copyToKernelsDir(Cwd::abs_path("$path/initrd"));
-    if ($extraInitrd) {
-        $initrd .= " " .$extraInitrdPath->path;
+
+    # Include second initrd with secrets
+    if (-e -x "$path/append-initrd-secrets") {
+      my $initrdName = basename($initrd);
+      my $initrdSecretsPath = "$bootPath/kernels/$initrdName-secrets";
+
+      mkpath(dirname($initrdSecretsPath), 0, 0755);
+      my $oldUmask = umask;
+      # Make sure initrd is not world readable (won't work if /boot is FAT)
+      umask 0137;
+      my $initrdSecretsPathTemp = File::Temp::mktemp("$initrdSecretsPath.XXXXXXXX");
+      system("$path/append-initrd-secrets", $initrdSecretsPathTemp) == 0 or die "failed to create initrd secrets\n";
+      # Check whether any secrets were actually added
+      if (-e $initrdSecretsPathTemp && ! -z _) {
+        rename $initrdSecretsPathTemp, $initrdSecretsPath or die "failed to move initrd secrets into place\n";
+        $copied{$initrdSecretsPath} = 1;
+        $initrd .= " " . ($grubBoot->path eq "/" ? "" : $grubBoot->path) . "/kernels/$initrdName-secrets";
+      } else {
+        unlink $initrdSecretsPathTemp;
+        rmdir dirname($initrdSecretsPathTemp);
+      }
+      umask $oldUmask;
     }
+
     my $xen = -e "$path/xen.gz" ? copyToKernelsDir(Cwd::abs_path("$path/xen.gz")) : undef;
 
     # FIXME: $confName
@@ -388,9 +401,6 @@ sub addEntry {
         if ($copyKernels == 0) {
             $conf .= $grubStore->search . "\n";
         }
-        if ($extraInitrd) {
-            $conf .= $extraInitrdPath->search . "\n";
-        }
         $conf .= "  $extraPerEntryConfig\n" if $extraPerEntryConfig;
         $conf .= "  multiboot $xen $xenParams\n" if $xen;
         $conf .= "  " . ($xen ? "module" : "linux") . " $kernel $kernelParams\n";

From 87dc127ce347020a81b08cdfe66912da14e0dc22 Mon Sep 17 00:00:00 2001
From: Stefan Frijters <sfrijters@gmail.com>
Date: Thu, 4 Jun 2020 21:39:41 +0200
Subject: [PATCH 67/91] openttd: 1.10.1 -> 1.10.2

A bug in the upstream configure script was fixed (OpenTTD/OpenTTD#8145),
which means we now need `which` available during the build.
---
 pkgs/games/openttd/default.nix | 8 ++++----
 1 file changed, 4 insertions(+), 4 deletions(-)

diff --git a/pkgs/games/openttd/default.nix b/pkgs/games/openttd/default.nix
index 519d4e3a7419..223f0a6ae8c5 100644
--- a/pkgs/games/openttd/default.nix
+++ b/pkgs/games/openttd/default.nix
@@ -1,4 +1,4 @@
-{ stdenv, fetchurl, fetchzip, pkgconfig, SDL2, libpng, zlib, xz, freetype, fontconfig, libxdg_basedir
+{ stdenv, fetchurl, fetchzip, pkgconfig, which, SDL2, libpng, zlib, xz, freetype, fontconfig, libxdg_basedir
 , withOpenGFX ? true, withOpenSFX ? true, withOpenMSX ? true
 , withFluidSynth ? true, audioDriver ? "alsa", fluidsynth, soundfont-fluid, procps
 , writeScriptBin, makeWrapper, runtimeShell
@@ -29,14 +29,14 @@ let
 in
 stdenv.mkDerivation rec {
   pname = "openttd";
-  version = "1.10.1";
+  version = "1.10.2";
 
   src = fetchurl {
     url = "https://cdn.openttd.org/openttd-releases/${version}/${pname}-${version}-source.tar.xz";
-    sha256 = "0d22a3c50f7a321f4f211594f4987ac16c381e8e3e40f116848e63e91e7fbb9b";
+    sha256 = "1xdn9rr858nq22a13cpbhcw74bwygf7lw95kvx3wn4zvb795b74k";
   };
 
-  nativeBuildInputs = [ pkgconfig makeWrapper ];
+  nativeBuildInputs = [ pkgconfig which makeWrapper ];
   buildInputs = [ SDL2 libpng xz zlib freetype fontconfig libxdg_basedir ]
     ++ stdenv.lib.optionals withFluidSynth [ fluidsynth soundfont-fluid ];
 

From 1fd972bd50590f96032f46daf15941d836bc95f4 Mon Sep 17 00:00:00 2001
From: Florian Klink <flokli@flokli.de>
Date: Fri, 5 Jun 2020 00:31:10 +0200
Subject: [PATCH 68/91] nixos/buildbot-master: fix typo in
 services.buildbot-master.bpPort

It's pbPort, and it's also a connection string, meaning
listen-on-localhost is also possible. Provide an alias for the old
option name, so old configs still work.
---
 .../buildbot/master.nix                       | 22 +++++++++++++++----
 1 file changed, 18 insertions(+), 4 deletions(-)

diff --git a/nixos/modules/services/continuous-integration/buildbot/master.nix b/nixos/modules/services/continuous-integration/buildbot/master.nix
index e3da3092d459..0185f490b0c2 100644
--- a/nixos/modules/services/continuous-integration/buildbot/master.nix
+++ b/nixos/modules/services/continuous-integration/buildbot/master.nix
@@ -16,7 +16,7 @@ let
     factory = util.BuildFactory()
     c = BuildmasterConfig = dict(
      workers       = [${concatStringsSep "," cfg.workers}],
-     protocols     = { 'pb': {'port': ${toString cfg.bpPort} } },
+     protocols     = { 'pb': {'port': ${toString cfg.pbPort} } },
      title         = '${escapeStr cfg.title}',
      titleURL      = '${escapeStr cfg.titleUrl}',
      buildbotURL   = '${escapeStr cfg.buildbotUrl}',
@@ -155,10 +155,20 @@ in {
         description = "Specifies the Buildbot directory.";
       };
 
-      bpPort = mkOption {
+      pbPort = mkOption {
         default = 9989;
-        type = types.int;
-        description = "Port where the master will listen to Buildbot Worker.";
+        type = types.either types.str types.int;
+        example = "'tcp:9990:interface=127.0.0.1'";
+        description = ''
+          The buildmaster will listen on a TCP port of your choosing
+          for connections from workers.
+          It can also use this port for connections from remote Change Sources,
+          status clients, and debug tools.
+          This port should be visible to the outside world, and you’ll need to tell
+          your worker admins about your choice.
+          If put in (single) quotes, this can also be used as a connection string,
+          as defined in the <link xlink:href="https://twistedmatrix.com/documents/current/core/howto/endpoints.html">ConnectionStrings guide</link>.
+        '';
       };
 
       listenAddress = mkOption {
@@ -264,5 +274,9 @@ in {
     };
   };
 
+  imports = [
+    (mkRenamedOptionModule [ "services" "buildbot-master" "bpPort" ] [ "services" "buildbot-master" "pbPort" ])
+  ];
+
   meta.maintainers = with lib.maintainers; [ nand0p mic92 ];
 }

From 4eaa5a086344a435edbd6e2ee698c55605b039e6 Mon Sep 17 00:00:00 2001
From: josephtheengineer <joseph@theengineer.life>
Date: Fri, 5 Jun 2020 14:16:52 +1000
Subject: [PATCH 69/91] freecad: use wrapQtAppsHook

---
 .../applications/graphics/freecad/default.nix | 20 +++++++++++++------
 1 file changed, 14 insertions(+), 6 deletions(-)

diff --git a/pkgs/applications/graphics/freecad/default.nix b/pkgs/applications/graphics/freecad/default.nix
index eb087c42ce0e..657caeca8b3d 100644
--- a/pkgs/applications/graphics/freecad/default.nix
+++ b/pkgs/applications/graphics/freecad/default.nix
@@ -1,7 +1,7 @@
-{ stdenv, mkDerivation, fetchFromGitHub, fetchpatch, cmake, ninja, coin3d, xercesc, ode
-, eigen, qtbase, qttools, qtwebkit, opencascade-occt, gts, hdf5, vtk, medfile
-, zlib, python3Packages, swig, gfortran, libXmu, soqt, libf2c, libGLU
-, makeWrapper, pkgconfig, mpi ? null }:
+{ stdenv, mkDerivation, fetchFromGitHub, fetchpatch, cmake, ninja, coin3d,
+xercesc, ode, eigen, qtbase, qttools, qtwebkit, wrapQtAppsHook,
+opencascade-occt, gts, hdf5, vtk, medfile, zlib, python3Packages, swig,
+gfortran, libXmu, soqt, libf2c, libGLU, makeWrapper, pkgconfig, mpi ? null }:
 
 assert mpi != null;
 
@@ -18,8 +18,16 @@ in mkDerivation rec {
     sha256 = "1phs9a0px5fnzpyx930cz39p5dis0f0yajxzii3c3sazgkzrd55s";
   };
 
-  nativeBuildInputs = [ cmake ninja pkgconfig pythonPackages.pyside2-tools ];
-  buildInputs = [ cmake coin3d xercesc ode eigen opencascade-occt gts
+  nativeBuildInputs = [
+    cmake
+    ninja
+    pkgconfig
+    pythonPackages.pyside2-tools
+    wrapQtAppsHook
+  ];
+
+  buildInputs = [
+    cmake coin3d xercesc ode eigen opencascade-occt gts
     zlib swig gfortran soqt libf2c makeWrapper mpi vtk hdf5 medfile
     libGLU libXmu qtbase qttools qtwebkit
   ] ++ (with pythonPackages; [

From fb6c3cee64826494973fdf4eb362eecac3fd8a11 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Domen=20Ko=C5=BEar?= <domen@dev.si>
Date: Fri, 5 Jun 2020 08:04:09 +0200
Subject: [PATCH 70/91] Add {pkgsMusl,pkgsStatic}.stdenv to build on hydra
 (#89425)
MIME-Version: 1.0
Content-Type: text/plain; charset=UTF-8
Content-Transfer-Encoding: 8bit

* Add pkgsMusl.stdenv to block nixpkgs channel

* Don’t include i686-linux for pkgs{Musl,Static}

musl bootstrapping is unavailable for i686-linux right now. so we can
just exclude it from hydra.

Co-authored-by: Matthew Bauer <mjbauer95@gmail.com>
---
 pkgs/top-level/release.nix | 3 +++
 1 file changed, 3 insertions(+)

diff --git a/pkgs/top-level/release.nix b/pkgs/top-level/release.nix
index 60a4a679f161..fc317f51ab5a 100644
--- a/pkgs/top-level/release.nix
+++ b/pkgs/top-level/release.nix
@@ -183,6 +183,9 @@ let
       idrisPackages = packagePlatforms pkgs.idrisPackages;
       agdaPackages = packagePlatforms pkgs.agdaPackages;
 
+      pkgsMusl.stdenv = [ "x86_64-linux" "aarch64-linux" ];
+      pkgsStatic.stdenv = [ "x86_64-linux" "aarch64-linux" ];
+
       tests = packagePlatforms pkgs.tests;
 
       # Language packages disabled in https://github.com/NixOS/nixpkgs/commit/ccd1029f58a3bb9eca32d81bf3f33cb4be25cc66

From c9057b3751a604ba009a85acc45dde06c919886e Mon Sep 17 00:00:00 2001
From: Vincent Laporte <Vincent.Laporte@gmail.com>
Date: Fri, 29 May 2020 08:33:36 +0200
Subject: [PATCH 71/91] ocamlPackages.custom_printf: remove at 112.24.00

This is a legacy package for OCaml 4.02

custom_printf is deprecated, use ppx_custom_printf instead
---
 .../ocaml-modules/custom_printf/default.nix   | 23 -------------------
 pkgs/top-level/ocaml-packages.nix             |  2 --
 2 files changed, 25 deletions(-)
 delete mode 100644 pkgs/development/ocaml-modules/custom_printf/default.nix

diff --git a/pkgs/development/ocaml-modules/custom_printf/default.nix b/pkgs/development/ocaml-modules/custom_printf/default.nix
deleted file mode 100644
index 8f8a0a5c8865..000000000000
--- a/pkgs/development/ocaml-modules/custom_printf/default.nix
+++ /dev/null
@@ -1,23 +0,0 @@
-{stdenv, buildOcaml, fetchurl, type_conv, sexplib_p4, pa_ounit}:
-
-buildOcaml rec {
-  name = "custom_printf";
-  version = "112.24.00";
-
-  minimumSupportedOcamlVersion = "4.02";
-
-  src = fetchurl {
-    url = "https://github.com/janestreet/custom_printf/archive/${version}.tar.gz";
-    sha256 = "dad3aface92c53e8fbcc12cc9358c4767cb1cb09857d4819a10ed98eccaca8f9";
-  };
-
-  buildInputs = [ pa_ounit ];
-  propagatedBuildInputs = [ type_conv sexplib_p4 ];
-
-  meta = with stdenv.lib; {
-    homepage = "https://github.com/janestreet/custom_printf";
-    description = "Syntax extension for printf format strings";
-    license = licenses.asl20;
-    maintainers = [ maintainers.ericbmerritt ];
-  };
-}
diff --git a/pkgs/top-level/ocaml-packages.nix b/pkgs/top-level/ocaml-packages.nix
index c19e0b612b04..cca067557d20 100644
--- a/pkgs/top-level/ocaml-packages.nix
+++ b/pkgs/top-level/ocaml-packages.nix
@@ -191,8 +191,6 @@ let
 
     curses = callPackage ../development/ocaml-modules/curses { };
 
-    custom_printf = callPackage ../development/ocaml-modules/custom_printf { };
-
     ctypes = callPackage ../development/ocaml-modules/ctypes { };
 
     decompress =  callPackage ../development/ocaml-modules/decompress { };

From 073d2fc4d5ab9c2d4761705b9e5de7b24f2b07c9 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?J=C3=B6rg=20Thalheim?= <joerg@thalheim.io>
Date: Fri, 5 Jun 2020 09:44:33 +0100
Subject: [PATCH 72/91] cgmanager: remove

fixes #30023
---
 nixos/modules/module-list.nix                |  1 -
 nixos/modules/rename.nix                     |  1 +
 nixos/modules/services/system/cgmanager.nix  | 26 -------------------
 pkgs/os-specific/linux/cgmanager/default.nix | 27 --------------------
 pkgs/top-level/aliases.nix                   |  1 +
 pkgs/top-level/all-packages.nix              |  2 --
 6 files changed, 2 insertions(+), 56 deletions(-)
 delete mode 100644 nixos/modules/services/system/cgmanager.nix
 delete mode 100644 pkgs/os-specific/linux/cgmanager/default.nix

diff --git a/nixos/modules/module-list.nix b/nixos/modules/module-list.nix
index e8c4a4c14cf0..978d33e75852 100644
--- a/nixos/modules/module-list.nix
+++ b/nixos/modules/module-list.nix
@@ -806,7 +806,6 @@
   ./services/security/torsocks.nix
   ./services/security/usbguard.nix
   ./services/security/vault.nix
-  ./services/system/cgmanager.nix
   ./services/system/cloud-init.nix
   ./services/system/dbus.nix
   ./services/system/earlyoom.nix
diff --git a/nixos/modules/rename.nix b/nixos/modules/rename.nix
index 7776c648af8a..c91febdb710f 100644
--- a/nixos/modules/rename.nix
+++ b/nixos/modules/rename.nix
@@ -24,6 +24,7 @@ with lib;
     (mkRemovedOptionModule [ "environment" "blcr" "enable" ] "The BLCR module has been removed")
     (mkRemovedOptionModule [ "services" "beegfsEnable" ] "The BeeGFS module has been removed")
     (mkRemovedOptionModule [ "services" "beegfs" ] "The BeeGFS module has been removed")
+    (mkRemovedOptionModule ["services" "cgmanager" "enable"] "cgmanager was deprecated by lxc and therefore removed from nixpkgs.")
     (mkRemovedOptionModule [ "services" "osquery" ] "The osquery module has been removed")
     (mkRemovedOptionModule [ "services" "fourStore" ] "The fourStore module has been removed")
     (mkRemovedOptionModule [ "services" "fourStoreEndpoint" ] "The fourStoreEndpoint module has been removed")
diff --git a/nixos/modules/services/system/cgmanager.nix b/nixos/modules/services/system/cgmanager.nix
deleted file mode 100644
index d3d57aa76928..000000000000
--- a/nixos/modules/services/system/cgmanager.nix
+++ /dev/null
@@ -1,26 +0,0 @@
-{ config, lib, pkgs, ... }:
-
-with lib;
-
-let
-  cfg = config.services.cgmanager;
-in {
-  meta.maintainers = [ maintainers.mic92 ];
-
-  ###### interface
-  options.services.cgmanager.enable = mkEnableOption "cgmanager";
-
-  ###### implementation
-  config = mkIf cfg.enable {
-    systemd.services.cgmanager = {
-      wantedBy = [ "multi-user.target" ];
-      description = "Cgroup management daemon";
-      restartIfChanged = false;
-      serviceConfig = {
-        ExecStart = "${pkgs.cgmanager}/bin/cgmanager -m name=systemd";
-        KillMode = "process";
-        Restart = "on-failure";
-      };
-    };
-  };
-}
diff --git a/pkgs/os-specific/linux/cgmanager/default.nix b/pkgs/os-specific/linux/cgmanager/default.nix
deleted file mode 100644
index d890ef44f745..000000000000
--- a/pkgs/os-specific/linux/cgmanager/default.nix
+++ /dev/null
@@ -1,27 +0,0 @@
-{ stdenv, fetchurl, pkgconfig, libnih, dbus, pam, popt }:
-
-stdenv.mkDerivation rec {
-  pname = "cgmanager";
-  version = "0.42";
-
-  src = fetchurl {
-    url = "https://linuxcontainers.org/downloads/${pname}/${pname}-${version}.tar.gz";
-    sha256 = "15np08h9jrvc1y1iafr8v654mzgsv5hshzc0n4p3pbf0rkra3h7c";
-  };
-
-  nativeBuildInputs = [ pkgconfig ];
-  buildInputs = [ libnih dbus pam popt ];
-
-  configureFlags = [
-    "--with-init-script=systemd"
-    "--sysconfdir=/etc"
-    "--localstatedir=/var"
-  ];
-
-  meta = with stdenv.lib; {
-    homepage = "https://linuxcontainers.org/cgmanager/introduction/";
-    description = "A central privileged daemon that manages all your cgroups";
-    license = licenses.lgpl21;
-    platforms = platforms.linux;
-  };
-}
diff --git a/pkgs/top-level/aliases.nix b/pkgs/top-level/aliases.nix
index ff4051310745..30d9ce5bcfd8 100644
--- a/pkgs/top-level/aliases.nix
+++ b/pkgs/top-level/aliases.nix
@@ -67,6 +67,7 @@ mapAliases ({
   bundler_HEAD = bundler; # added 2015-11-15
   cantarell_fonts = cantarell-fonts; # added 2018-03-03
   catfish = xfce.catfish; # added 2019-12-22
+  cgmanager = throw "cgmanager was deprecated by lxc and therefore removed from nixpkgs."; # added 2020-06-05
   checkbashism = checkbashisms; # added 2016-08-16
   cide = throw "deprecated in 2019-09-11: abandoned by upstream";
   cinepaint = throw "cinepaint has been removed from nixpkgs, as it was unmaintained"; # added 2019-12-10
diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix
index a7f5bd5485b3..6bfab9203e8d 100644
--- a/pkgs/top-level/all-packages.nix
+++ b/pkgs/top-level/all-packages.nix
@@ -16542,8 +16542,6 @@ in
 
   cachefilesd = callPackage ../os-specific/linux/cachefilesd { };
 
-  cgmanager = callPackage ../os-specific/linux/cgmanager { };
-
   checkpolicy = callPackage ../os-specific/linux/checkpolicy { };
 
   checksec = callPackage ../os-specific/linux/checksec { };

From e4445d17dd7956796836385343d9f1b1e4cfbd72 Mon Sep 17 00:00:00 2001
From: Anton Parkhomenko <mailbox@chuwy.me>
Date: Fri, 5 Jun 2020 16:08:28 +0700
Subject: [PATCH 73/91] rq: fix build on darwin

---
 pkgs/development/tools/rq/default.nix | 5 +++--
 1 file changed, 3 insertions(+), 2 deletions(-)

diff --git a/pkgs/development/tools/rq/default.nix b/pkgs/development/tools/rq/default.nix
index 5fe73ed33f0a..89ba58ea5f53 100644
--- a/pkgs/development/tools/rq/default.nix
+++ b/pkgs/development/tools/rq/default.nix
@@ -1,4 +1,4 @@
-{ lib, fetchFromGitHub, rustPlatform, libiconv, llvmPackages, v8 }:
+{ stdenv, lib, fetchFromGitHub, rustPlatform, libiconv, llvmPackages, v8 }:
 
 rustPlatform.buildRustPackage rec {
   pname = "rq";
@@ -13,7 +13,8 @@ rustPlatform.buildRustPackage rec {
 
   cargoSha256 = "0c5vwy3c5ji602dj64z6jqvcpi2xff03zvjbnwihb3ydqwnb3v67";
 
-  buildInputs = [ llvmPackages.clang-unwrapped v8 ];
+  buildInputs = [ llvmPackages.clang-unwrapped v8 ] 
+  ++ lib.optionals stdenv.isDarwin [ libiconv ];
 
   configurePhase = ''
     export LIBCLANG_PATH="${llvmPackages.clang-unwrapped}/lib"

From f0396574ab32b2d0b02469e7c2b1446623344f09 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?J=C3=B6rg=20Thalheim?= <joerg@thalheim.io>
Date: Fri, 5 Jun 2020 08:10:53 +0100
Subject: [PATCH 74/91] buildRustPackage: add documentation on how to create
 cargo.lock patches

---
 doc/languages-frameworks/rust.section.md | 18 ++++++++++++++++++
 pkgs/build-support/rust/default.nix      |  1 +
 2 files changed, 19 insertions(+)

diff --git a/doc/languages-frameworks/rust.section.md b/doc/languages-frameworks/rust.section.md
index cec3373cbee6..f56bc5285b93 100644
--- a/doc/languages-frameworks/rust.section.md
+++ b/doc/languages-frameworks/rust.section.md
@@ -75,6 +75,24 @@ pkgs.rustPlatform.buildRustPackage {
 }
 ```
 
+### Building a crate with an absent or out-of-date Cargo.lock file
+
+`buildRustPackage` needs a `Cargo.lock` file to get all dependencies in the
+source code in a reproducible way. If it is missing or out-of-date one can use
+the `cargoPatches` attribute to update or add it.
+
+```
+{ lib, rustPlatform, fetchFromGitHub }:
+
+rustPlatform.buildRustPackage rec {
+  (...)
+  cargoPatches = [
+    # a patch file to add/update Cargo.lock in the source code
+    ./add-Cargo.lock.patch
+  ];
+}
+```
+
 ## Compiling Rust crates using Nix instead of Cargo
 
 ### Simple operation
diff --git a/pkgs/build-support/rust/default.nix b/pkgs/build-support/rust/default.nix
index a6b47930c274..795ce841ffb6 100644
--- a/pkgs/build-support/rust/default.nix
+++ b/pkgs/build-support/rust/default.nix
@@ -130,6 +130,7 @@ stdenv.mkDerivation (args // {
       # give a friendlier error msg.
       if ! [ -e $srcLockfile ]; then
         echo "ERROR: Missing Cargo.lock from src. Expected to find it at: $srcLockfile"
+        echo "Hint: You can use the cargoPatches attribute to add a Cargo.lock manually to the build."
         exit 1
       fi
 

From a4ed97daf0a7d594b01fe5f19a95dc13d427c75d Mon Sep 17 00:00:00 2001
From: Frederik Rietdijk <fridh@fridh.nl>
Date: Fri, 5 Jun 2020 12:00:31 +0200
Subject: [PATCH 75/91] pythonmagick -> python2.pkgs.pythonmagick

Python bindings should be in python-packages.nix.
---
 .../python-modules/pythonmagick}/default.nix  | 31 ++++++++++++++-----
 pkgs/top-level/all-packages.nix               |  2 --
 pkgs/top-level/python-packages.nix            |  2 ++
 3 files changed, 25 insertions(+), 10 deletions(-)
 rename pkgs/{applications/graphics/PythonMagick => development/python-modules/pythonmagick}/default.nix (51%)

diff --git a/pkgs/applications/graphics/PythonMagick/default.nix b/pkgs/development/python-modules/pythonmagick/default.nix
similarity index 51%
rename from pkgs/applications/graphics/PythonMagick/default.nix
rename to pkgs/development/python-modules/pythonmagick/default.nix
index 487648d07ca1..a647fa1005bc 100644
--- a/pkgs/applications/graphics/PythonMagick/default.nix
+++ b/pkgs/development/python-modules/pythonmagick/default.nix
@@ -1,10 +1,19 @@
-# This expression provides Python bindings to ImageMagick. Python libraries are supposed to be called via `python-packages.nix`.
+{ lib
+, buildPythonPackage
+, fetchurl
+, python
+, pkg-config
+, imagemagick
+, autoreconfHook
+, boost
+, isPy3k
+, pythonImportsCheckHook
+}:
 
-{ stdenv, fetchurl, python, pkgconfig, imagemagick, autoreconfHook }:
-
-stdenv.mkDerivation rec {
+buildPythonPackage rec {
   pname = "pythonmagick";
   version = "0.9.16";
+  format = "other";
 
   src = fetchurl {
     url = "mirror://imagemagick/python/releases/PythonMagick-${version}.tar.xz";
@@ -15,12 +24,18 @@ stdenv.mkDerivation rec {
     rm configure
   '';
 
-  configureFlags = [ "--with-boost=${python.pkgs.boost}" ];
+  configureFlags = [ "--with-boost=${boost}" ];
 
-  nativeBuildInputs = [ pkgconfig autoreconfHook ];
-  buildInputs = [ python python.pkgs.boost imagemagick ];
+  nativeBuildInputs = [ pkg-config autoreconfHook pythonImportsCheckHook ];
+  buildInputs = [ python boost imagemagick ];
 
-  meta = with stdenv.lib; {
+  pythonImportsCheck = [
+    "PythonMagick"
+  ];
+
+  disabled = isPy3k;
+
+  meta = with lib; {
     homepage = "http://www.imagemagick.org/script/api.php";
     license = licenses.imagemagick;
     description = "PythonMagick provides object oriented bindings for the ImageMagick Library.";
diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix
index a7f5bd5485b3..78a6dc298fe4 100644
--- a/pkgs/top-level/all-packages.nix
+++ b/pkgs/top-level/all-packages.nix
@@ -21614,8 +21614,6 @@ in
 
   pybitmessage = callPackage ../applications/networking/instant-messengers/pybitmessage { };
 
-  pythonmagick = callPackage ../applications/graphics/PythonMagick { };
-
   qbittorrent = libsForQt5.callPackage ../applications/networking/p2p/qbittorrent { };
   qbittorrent-nox = qbittorrent.override {
     guiSupport = false;
diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix
index 885622b9be95..26af65dd1aa9 100644
--- a/pkgs/top-level/python-packages.nix
+++ b/pkgs/top-level/python-packages.nix
@@ -1367,6 +1367,8 @@ in {
 
   pytmx = callPackage ../development/python-modules/pytmx { };
 
+  pythonmagick = callPackage ../development/python-modules/pythonmagick { };
+
   python-binance = callPackage ../development/python-modules/python-binance { };
 
   python-dbusmock = callPackage ../development/python-modules/python-dbusmock { };

From 0f2d9bbd25b6c68ec1bb1964fbad353da658f454 Mon Sep 17 00:00:00 2001
From: WilliButz <wbutz@cyberfnord.de>
Date: Fri, 5 Jun 2020 14:30:08 +0200
Subject: [PATCH 76/91] atlassian-confluence: 7.5.0 -> 7.5.1

---
 pkgs/servers/atlassian/confluence.nix | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/pkgs/servers/atlassian/confluence.nix b/pkgs/servers/atlassian/confluence.nix
index 07f5abd7fa5e..64ecd981fc47 100644
--- a/pkgs/servers/atlassian/confluence.nix
+++ b/pkgs/servers/atlassian/confluence.nix
@@ -8,11 +8,11 @@ assert withMysql -> (mysql_jdbc != null);
 
 stdenvNoCC.mkDerivation rec {
   pname = "atlassian-confluence";
-  version = "7.5.0";
+  version = "7.5.1";
 
   src = fetchurl {
     url = "https://product-downloads.atlassian.com/software/confluence/downloads/${pname}-${version}.tar.gz";
-    sha256 = "177n20cjlrnv767ql72dldmdrsky6xnn7cl52qpvahnglnp5878z";
+    sha256 = "0lxvff0sn1kxsm599lq72hw11qnwjn2da3mz1h8mqz0rn2adhg07";
   };
 
   buildPhase = ''

From f16f0c2facb0ecab321d7f4f33e9ccf94c5f3c1a Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?R=C3=A9mi=20NICOLE?= <minijackson@users.noreply.github.com>
Date: Fri, 5 Jun 2020 14:51:34 +0200
Subject: [PATCH 77/91] xdg-desktop-portal-wlr: init at 0.1.0 (#83485)

* xdg-desktop-portal-wlr: init at 2020-03-13

* xdg-desktop-portal-wlr: 2020-03-13 -> 0.1.0

Co-authored-by: zimbatm <zimbatm@zimbatm.com>
---
 .../xdg-desktop-portal-wlr/default.nix        | 26 +++++++++++++++++++
 pkgs/top-level/all-packages.nix               |  2 ++
 2 files changed, 28 insertions(+)
 create mode 100644 pkgs/development/libraries/xdg-desktop-portal-wlr/default.nix

diff --git a/pkgs/development/libraries/xdg-desktop-portal-wlr/default.nix b/pkgs/development/libraries/xdg-desktop-portal-wlr/default.nix
new file mode 100644
index 000000000000..c6faa4fc017a
--- /dev/null
+++ b/pkgs/development/libraries/xdg-desktop-portal-wlr/default.nix
@@ -0,0 +1,26 @@
+{ stdenv, fetchFromGitHub
+, meson, ninja, pkgconfig, wayland-protocols
+, pipewire, wayland, elogind, systemd, libdrm }:
+
+stdenv.mkDerivation rec {
+  pname = "xdg-desktop-portal-wlr";
+  version = "0.1.0";
+
+  src = fetchFromGitHub {
+    owner = "emersion";
+    repo = pname;
+    rev = "v${version}";
+    sha256 = "12k92h9dmn1fyn8nzxk69cyv0gnb7g9gj7a66mw5dcl5zqnl07nc";
+  };
+
+  nativeBuildInputs = [ meson ninja pkgconfig wayland-protocols ];
+  buildInputs = [ pipewire wayland elogind systemd libdrm ];
+
+  meta = with stdenv.lib; {
+    homepage = "https://github.com/emersion/xdg-desktop-portal-wlr";
+    description = "xdg-desktop-portal backend for wlroots";
+    maintainers = with maintainers; [ minijackson ];
+    platforms = platforms.linux;
+    license = licenses.mit;
+  };
+}
diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix
index 04d090040832..2f4fe9578a01 100644
--- a/pkgs/top-level/all-packages.nix
+++ b/pkgs/top-level/all-packages.nix
@@ -23030,6 +23030,8 @@ in
 
   xdg-desktop-portal-gtk = callPackage ../development/libraries/xdg-desktop-portal-gtk { };
 
+  xdg-desktop-portal-wlr = callPackage ../development/libraries/xdg-desktop-portal-wlr { };
+
   xdg-user-dirs = callPackage ../tools/X11/xdg-user-dirs { };
 
   xdg_utils = callPackage ../tools/X11/xdg-utils {

From 877920254a621970fb679e4cac2a2f281abc86a6 Mon Sep 17 00:00:00 2001
From: Tim Steinbach <tim@nequissimus.com>
Date: Fri, 5 Jun 2020 09:36:43 -0400
Subject: [PATCH 78/91] linux: 4.14.182 -> 4.14.183

---
 pkgs/os-specific/linux/kernel/linux-4.14.nix | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/pkgs/os-specific/linux/kernel/linux-4.14.nix b/pkgs/os-specific/linux/kernel/linux-4.14.nix
index ca48ed48558b..e80b8f765748 100644
--- a/pkgs/os-specific/linux/kernel/linux-4.14.nix
+++ b/pkgs/os-specific/linux/kernel/linux-4.14.nix
@@ -3,7 +3,7 @@
 with stdenv.lib;
 
 buildLinux (args // rec {
-  version = "4.14.182";
+  version = "4.14.183";
 
   # modDirVersion needs to be x.y.z, will automatically add .0 if needed
   modDirVersion = if (modDirVersionArg == null) then concatStringsSep "." (take 3 (splitVersion "${version}.0")) else modDirVersionArg;
@@ -13,6 +13,6 @@ buildLinux (args // rec {
 
   src = fetchurl {
     url = "mirror://kernel/linux/kernel/v4.x/linux-${version}.tar.xz";
-    sha256 = "142v7qnfska86jqzilwq00kxdrq08iaaaw7f47xp9bnhb8fiy7b7";
+    sha256 = "11c0vd2pwplm8wafich4zg2mnp10vvnap987c5jh96w1avpsyra2";
   };
 } // (args.argsOverride or {}))

From 0c574f335739f54a6b3562febc5e1a6b08c6956a Mon Sep 17 00:00:00 2001
From: Tim Steinbach <tim@nequissimus.com>
Date: Fri, 5 Jun 2020 09:37:03 -0400
Subject: [PATCH 79/91] linux: 4.19.125 -> 4.19.126

---
 pkgs/os-specific/linux/kernel/linux-4.19.nix | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/pkgs/os-specific/linux/kernel/linux-4.19.nix b/pkgs/os-specific/linux/kernel/linux-4.19.nix
index 20aced02a86b..20b553caf4ef 100644
--- a/pkgs/os-specific/linux/kernel/linux-4.19.nix
+++ b/pkgs/os-specific/linux/kernel/linux-4.19.nix
@@ -3,7 +3,7 @@
 with stdenv.lib;
 
 buildLinux (args // rec {
-  version = "4.19.125";
+  version = "4.19.126";
 
   # modDirVersion needs to be x.y.z, will automatically add .0 if needed
   modDirVersion = if (modDirVersionArg == null) then concatStringsSep "." (take 3 (splitVersion "${version}.0")) else modDirVersionArg;
@@ -13,6 +13,6 @@ buildLinux (args // rec {
 
   src = fetchurl {
     url = "mirror://kernel/linux/kernel/v4.x/linux-${version}.tar.xz";
-    sha256 = "0zmxs6q2rgssvsh76xq9xgcax7bps19x2448d1q1fj9pzc7g8hwq";
+    sha256 = "129ziwvk3f4xh8jvnq2krajc0bnrl2zxffqsiz63j7p3vc57wakf";
   };
 } // (args.argsOverride or {}))

From 4bf8aa6b7129d777cfc0c97e07ba931b75b40a3e Mon Sep 17 00:00:00 2001
From: Tim Steinbach <tim@nequissimus.com>
Date: Fri, 5 Jun 2020 09:37:11 -0400
Subject: [PATCH 80/91] linux: 4.4.225 -> 4.4.226

---
 pkgs/os-specific/linux/kernel/linux-4.4.nix | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/pkgs/os-specific/linux/kernel/linux-4.4.nix b/pkgs/os-specific/linux/kernel/linux-4.4.nix
index a9d45bcdea76..125f8f723c55 100644
--- a/pkgs/os-specific/linux/kernel/linux-4.4.nix
+++ b/pkgs/os-specific/linux/kernel/linux-4.4.nix
@@ -1,11 +1,11 @@
 { stdenv, buildPackages, fetchurl, perl, buildLinux, ... } @ args:
 
 buildLinux (args // rec {
-  version = "4.4.225";
+  version = "4.4.226";
   extraMeta.branch = "4.4";
 
   src = fetchurl {
     url = "mirror://kernel/linux/kernel/v4.x/linux-${version}.tar.xz";
-    sha256 = "0pn66hf9yrjg15skq1inscr5m0slvgsd2qm8rg5id70llrb4jis9";
+    sha256 = "1dwvm81i62b06jsl38spfn719zrsbwq5z8viwckrpw4ma4w9k0j1";
   };
 } // (args.argsOverride or {}))

From c511f3bab65218607e8d0686314d5c28fa12fed0 Mon Sep 17 00:00:00 2001
From: Tim Steinbach <tim@nequissimus.com>
Date: Fri, 5 Jun 2020 09:37:26 -0400
Subject: [PATCH 81/91] linux: 4.9.225 -> 4.9.226

---
 pkgs/os-specific/linux/kernel/linux-4.9.nix | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/pkgs/os-specific/linux/kernel/linux-4.9.nix b/pkgs/os-specific/linux/kernel/linux-4.9.nix
index b13ed0e8fc56..88809a74b7b8 100644
--- a/pkgs/os-specific/linux/kernel/linux-4.9.nix
+++ b/pkgs/os-specific/linux/kernel/linux-4.9.nix
@@ -1,11 +1,11 @@
 { stdenv, buildPackages, fetchurl, perl, buildLinux, ... } @ args:
 
 buildLinux (args // rec {
-  version = "4.9.225";
+  version = "4.9.226";
   extraMeta.branch = "4.9";
 
   src = fetchurl {
     url = "mirror://kernel/linux/kernel/v4.x/linux-${version}.tar.xz";
-    sha256 = "1s63aymgsc4lsysy9d972ps9cyrf6bncyy5wcpv5a3wbaj678iz5";
+    sha256 = "1jj5ydz5cy87z7hrv54bkyl9739lpzja8580ngjhrip5iwb8q2j6";
   };
 } // (args.argsOverride or {}))

From 6599499cd7793b085edd0072b7bbde4039626753 Mon Sep 17 00:00:00 2001
From: Tim Steinbach <tim@nequissimus.com>
Date: Fri, 5 Jun 2020 09:37:38 -0400
Subject: [PATCH 82/91] linux: 5.4.43 -> 5.4.44

---
 pkgs/os-specific/linux/kernel/linux-5.4.nix | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/pkgs/os-specific/linux/kernel/linux-5.4.nix b/pkgs/os-specific/linux/kernel/linux-5.4.nix
index 801003dc4f59..b4ec0169f5b4 100644
--- a/pkgs/os-specific/linux/kernel/linux-5.4.nix
+++ b/pkgs/os-specific/linux/kernel/linux-5.4.nix
@@ -3,7 +3,7 @@
 with stdenv.lib;
 
 buildLinux (args // rec {
-  version = "5.4.43";
+  version = "5.4.44";
 
   # modDirVersion needs to be x.y.z, will automatically add .0 if needed
   modDirVersion = if (modDirVersionArg == null) then concatStringsSep "." (take 3 (splitVersion "${version}.0")) else modDirVersionArg;
@@ -13,6 +13,6 @@ buildLinux (args // rec {
 
   src = fetchurl {
     url = "mirror://kernel/linux/kernel/v5.x/linux-${version}.tar.xz";
-    sha256 = "0i07g72138xdf1l8x593jndq0waf3fx7plz3m6n5f9fl885bjrr6";
+    sha256 = "0fc4nsv1zwlknvfv1bzkjlq2vlx28wfl09hg2p7r8cn7a77bphlp";
   };
 } // (args.argsOverride or {}))

From 4c5251436bcee0a510f3f9d3adfdeeedfa8610dc Mon Sep 17 00:00:00 2001
From: Tim Steinbach <tim@nequissimus.com>
Date: Fri, 5 Jun 2020 09:37:49 -0400
Subject: [PATCH 83/91] linux: 5.6.15 -> 5.6.16

---
 pkgs/os-specific/linux/kernel/linux-5.6.nix | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/pkgs/os-specific/linux/kernel/linux-5.6.nix b/pkgs/os-specific/linux/kernel/linux-5.6.nix
index d19fe9cbc6a0..a6d3ce6c6a08 100644
--- a/pkgs/os-specific/linux/kernel/linux-5.6.nix
+++ b/pkgs/os-specific/linux/kernel/linux-5.6.nix
@@ -3,7 +3,7 @@
 with stdenv.lib;
 
 buildLinux (args // rec {
-  version = "5.6.15";
+  version = "5.6.16";
 
   # modDirVersion needs to be x.y.z, will automatically add .0 if needed
   modDirVersion = if (modDirVersionArg == null) then concatStringsSep "." (take 3 (splitVersion "${version}.0")) else modDirVersionArg;
@@ -13,6 +13,6 @@ buildLinux (args // rec {
 
   src = fetchurl {
     url = "mirror://kernel/linux/kernel/v5.x/linux-${version}.tar.xz";
-    sha256 = "0kh34f9vdfsi9g83fa1i1926djyzfi466w02c4y4d46ljf9pkav5";
+    sha256 = "1xvwk6yxi5nhiwhskpmr89a31286mw9hpm0y3l3i5ydswx6lnl15";
   };
 } // (args.argsOverride or {}))

From 7557c83ea49c0d3b1fc46806f20818303a94a706 Mon Sep 17 00:00:00 2001
From: Tim Steinbach <tim@nequissimus.com>
Date: Fri, 5 Jun 2020 09:45:08 -0400
Subject: [PATCH 84/91] linux_latest-libre: 17506 -> 17527

---
 pkgs/os-specific/linux/kernel/linux-libre.nix | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/pkgs/os-specific/linux/kernel/linux-libre.nix b/pkgs/os-specific/linux/kernel/linux-libre.nix
index bcea8bed7531..2daf3d4b8858 100644
--- a/pkgs/os-specific/linux/kernel/linux-libre.nix
+++ b/pkgs/os-specific/linux/kernel/linux-libre.nix
@@ -1,8 +1,8 @@
 { stdenv, lib, fetchsvn, linux
 , scripts ? fetchsvn {
     url = "https://www.fsfla.org/svn/fsfla/software/linux-libre/releases/branches/";
-    rev = "17506";
-    sha256 = "0yial2fib8bvv31ihzlxn80xlnpx8f0z6ml9md5xj3zxzslsy5iq";
+    rev = "17527";
+    sha256 = "0kijrflm1z6wnd4hg46lgm1sqps3fvnrrbzwjfwqq171a78sphhr";
   }
 , ...
 }:

From 2c2362cea54cc4e98010fe9b909c33da3f8d3daf Mon Sep 17 00:00:00 2001
From: Tim Steinbach <tim@nequissimus.com>
Date: Fri, 5 Jun 2020 09:45:19 -0400
Subject: [PATCH 85/91] linux/hardened/patches/4.14: 4.14.182.a -> 4.14.183.a

---
 pkgs/os-specific/linux/kernel/hardened/patches.json | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/pkgs/os-specific/linux/kernel/hardened/patches.json b/pkgs/os-specific/linux/kernel/hardened/patches.json
index 59e6e768a4b2..948f50a08f97 100644
--- a/pkgs/os-specific/linux/kernel/hardened/patches.json
+++ b/pkgs/os-specific/linux/kernel/hardened/patches.json
@@ -1,8 +1,8 @@
 {
     "4.14": {
-        "name": "linux-hardened-4.14.182.a.patch",
-        "sha256": "1kkchcv3qkm41rgscm12ii852q2846crbpvafywz31qg62lb6qig",
-        "url": "https://github.com/anthraxx/linux-hardened/releases/download/4.14.182.a/linux-hardened-4.14.182.a.patch"
+        "name": "linux-hardened-4.14.183.a.patch",
+        "sha256": "0k9dg37q3hcm13iyw662indwy23aylc03ldqfn7613c7ymqmbzj7",
+        "url": "https://github.com/anthraxx/linux-hardened/releases/download/4.14.183.a/linux-hardened-4.14.183.a.patch"
     },
     "4.19": {
         "name": "linux-hardened-4.19.125.a.patch",

From 7ce3d24baaeda14b7f6e502bad881d0398d79e4b Mon Sep 17 00:00:00 2001
From: Tim Steinbach <tim@nequissimus.com>
Date: Fri, 5 Jun 2020 09:45:21 -0400
Subject: [PATCH 86/91] linux/hardened/patches/4.19: 4.19.125.a -> 4.19.126.a

---
 pkgs/os-specific/linux/kernel/hardened/patches.json | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/pkgs/os-specific/linux/kernel/hardened/patches.json b/pkgs/os-specific/linux/kernel/hardened/patches.json
index 948f50a08f97..4bc5fe981ded 100644
--- a/pkgs/os-specific/linux/kernel/hardened/patches.json
+++ b/pkgs/os-specific/linux/kernel/hardened/patches.json
@@ -5,9 +5,9 @@
         "url": "https://github.com/anthraxx/linux-hardened/releases/download/4.14.183.a/linux-hardened-4.14.183.a.patch"
     },
     "4.19": {
-        "name": "linux-hardened-4.19.125.a.patch",
-        "sha256": "1dhb8syp4j7hc4mx3s7c2x0gxil5dw7jh0swfqzjm02npbwpp19r",
-        "url": "https://github.com/anthraxx/linux-hardened/releases/download/4.19.125.a/linux-hardened-4.19.125.a.patch"
+        "name": "linux-hardened-4.19.126.a.patch",
+        "sha256": "1wr4spaqgh404w0fqpys8xwj11as86j0cfzb903c0rx6lhqfp6sf",
+        "url": "https://github.com/anthraxx/linux-hardened/releases/download/4.19.126.a/linux-hardened-4.19.126.a.patch"
     },
     "5.4": {
         "name": "linux-hardened-5.4.43.a.patch",

From 5537f647004e7659ed02706829c6c467f8076a4f Mon Sep 17 00:00:00 2001
From: Tim Steinbach <tim@nequissimus.com>
Date: Fri, 5 Jun 2020 09:45:23 -0400
Subject: [PATCH 87/91] linux/hardened/patches/5.4: 5.4.43.a -> 5.4.44.a

---
 pkgs/os-specific/linux/kernel/hardened/patches.json | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/pkgs/os-specific/linux/kernel/hardened/patches.json b/pkgs/os-specific/linux/kernel/hardened/patches.json
index 4bc5fe981ded..53e623526801 100644
--- a/pkgs/os-specific/linux/kernel/hardened/patches.json
+++ b/pkgs/os-specific/linux/kernel/hardened/patches.json
@@ -10,9 +10,9 @@
         "url": "https://github.com/anthraxx/linux-hardened/releases/download/4.19.126.a/linux-hardened-4.19.126.a.patch"
     },
     "5.4": {
-        "name": "linux-hardened-5.4.43.a.patch",
-        "sha256": "14d9sg1f2a0fnr2q9z6ck5biip1kbzqqwlg4xzpwv83vaycq4i3b",
-        "url": "https://github.com/anthraxx/linux-hardened/releases/download/5.4.43.a/linux-hardened-5.4.43.a.patch"
+        "name": "linux-hardened-5.4.44.a.patch",
+        "sha256": "0gihrcxqg3hax20xhvna4lmgsivari6wwsyqz09w34v8p1fhd5nx",
+        "url": "https://github.com/anthraxx/linux-hardened/releases/download/5.4.44.a/linux-hardened-5.4.44.a.patch"
     },
     "5.6": {
         "name": "linux-hardened-5.6.15.a.patch",

From 05b3c7dd6627d7ae4d72ab090fd02b48a4b7cdac Mon Sep 17 00:00:00 2001
From: Tim Steinbach <tim@nequissimus.com>
Date: Fri, 5 Jun 2020 09:45:25 -0400
Subject: [PATCH 88/91] linux/hardened/patches/5.6: 5.6.15.a -> 5.6.16.a

---
 pkgs/os-specific/linux/kernel/hardened/patches.json | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/pkgs/os-specific/linux/kernel/hardened/patches.json b/pkgs/os-specific/linux/kernel/hardened/patches.json
index 53e623526801..a25057043f84 100644
--- a/pkgs/os-specific/linux/kernel/hardened/patches.json
+++ b/pkgs/os-specific/linux/kernel/hardened/patches.json
@@ -15,8 +15,8 @@
         "url": "https://github.com/anthraxx/linux-hardened/releases/download/5.4.44.a/linux-hardened-5.4.44.a.patch"
     },
     "5.6": {
-        "name": "linux-hardened-5.6.15.a.patch",
-        "sha256": "0gvp4mra07aj22mrjj8gzd3k7z1zafvak461iajrxfjhzh1z3bdf",
-        "url": "https://github.com/anthraxx/linux-hardened/releases/download/5.6.15.a/linux-hardened-5.6.15.a.patch"
+        "name": "linux-hardened-5.6.16.a.patch",
+        "sha256": "0nci30k7xh56b6454cd0hkpvpkfqb98cqdpvjaamlnmiphz4sk1f",
+        "url": "https://github.com/anthraxx/linux-hardened/releases/download/5.6.16.a/linux-hardened-5.6.16.a.patch"
     }
 }

From 61dd71c91443981b9576ae6d66e5a0e9ed18599a Mon Sep 17 00:00:00 2001
From: Tim Steinbach <tim@nequissimus.com>
Date: Fri, 5 Jun 2020 09:45:35 -0400
Subject: [PATCH 89/91] oh-my-zsh: 2020-06-02 -> 2020-06-05

---
 pkgs/shells/zsh/oh-my-zsh/default.nix | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/pkgs/shells/zsh/oh-my-zsh/default.nix b/pkgs/shells/zsh/oh-my-zsh/default.nix
index 4c4fbfaefefd..a2de44412ad9 100644
--- a/pkgs/shells/zsh/oh-my-zsh/default.nix
+++ b/pkgs/shells/zsh/oh-my-zsh/default.nix
@@ -4,13 +4,13 @@
 { stdenv, fetchgit }:
 
 stdenv.mkDerivation rec {
-  version = "2020-06-02";
+  version = "2020-06-05";
   pname = "oh-my-zsh";
-  rev = "c58572d5fe51b3ba09801837b6eee2cb6f0bf913";
+  rev = "94e784360e2ad34faa6a4a648c67a5c6ed6c987f";
 
   src = fetchgit { inherit rev;
     url = "https://github.com/ohmyzsh/ohmyzsh";
-    sha256 = "1gvw90ma96wrg6bpphdgfqfhrgf5327q7dwqjmxxy67xspczm9v4";
+    sha256 = "032ba9mjf72jlzn6kcd9dygz28q1kj34fz54ss7rpw17di8hnydb";
   };
 
   pathsToLink = [ "/share/oh-my-zsh" ];

From 2dc71847d96b338bd65376709ba51cf5f2ed5732 Mon Sep 17 00:00:00 2001
From: Tim Steinbach <tim@nequissimus.com>
Date: Fri, 5 Jun 2020 09:45:43 -0400
Subject: [PATCH 90/91] zoom-us: 5.0.413237.0524 -> 5.0.418682.0603

---
 .../networking/instant-messengers/zoom-us/default.nix         | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/pkgs/applications/networking/instant-messengers/zoom-us/default.nix b/pkgs/applications/networking/instant-messengers/zoom-us/default.nix
index 566371e3af03..7f5cf65e0937 100644
--- a/pkgs/applications/networking/instant-messengers/zoom-us/default.nix
+++ b/pkgs/applications/networking/instant-messengers/zoom-us/default.nix
@@ -15,11 +15,11 @@ assert pulseaudioSupport -> libpulseaudio != null;
 let
   inherit (stdenv.lib) concatStringsSep makeBinPath optional;
 
-  version = "5.0.413237.0524";
+  version = "5.0.418682.0603";
   srcs = {
     x86_64-linux = fetchurl {
       url = "https://zoom.us/client/${version}/zoom_x86_64.tar.xz";
-      sha256 = "09hr31pzjgwaa898akl953k7fcshkq8r065i2047mk247bjy278k";
+      sha256 = "1vlba3jgp3dr16n5g29l0dpdd054d8h6lkwk3a6346shvd46mpja";
     };
   };
 

From 5f0bd4d70f18b3499005eb61a34acb98c9b05756 Mon Sep 17 00:00:00 2001
From: Frederik Rietdijk <fridh@fridh.nl>
Date: Fri, 5 Jun 2020 18:25:22 +0200
Subject: [PATCH 91/91] python3.pkgs.jupyter-sphinx: init at 0.2.4

---
 .../python-modules/jupyter-sphinx/default.nix | 32 +++++++++++++++++++
 pkgs/top-level/python-packages.nix            |  2 ++
 2 files changed, 34 insertions(+)
 create mode 100644 pkgs/development/python-modules/jupyter-sphinx/default.nix

diff --git a/pkgs/development/python-modules/jupyter-sphinx/default.nix b/pkgs/development/python-modules/jupyter-sphinx/default.nix
new file mode 100644
index 000000000000..9f2143e2f20d
--- /dev/null
+++ b/pkgs/development/python-modules/jupyter-sphinx/default.nix
@@ -0,0 +1,32 @@
+{ lib
+, buildPythonPackage
+, fetchPypi
+, nbformat
+, sphinx
+, ipywidgets
+, pythonOlder
+}:
+
+buildPythonPackage rec {
+  pname = "jupyter-sphinx";
+  version = "0.2.4";
+
+  src = fetchPypi {
+    inherit version;
+    pname = "jupyter_sphinx";
+    sha256 = "b5ba1efdd1488b385de0068036a665932ed93998e40ce3a342c60f0926781fd9";
+  };
+
+  propagatedBuildInputs = [ nbformat sphinx ipywidgets ];
+
+  doCheck = false;
+
+  disabled = pythonOlder "3.5";
+
+  meta = with lib; {
+    description = "Jupyter Sphinx Extensions";
+    homepage = "https://github.com/jupyter/jupyter-sphinx/";
+    license = licenses.bsd3;
+  };    
+
+}
\ No newline at end of file
diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix
index 26af65dd1aa9..00960b457252 100644
--- a/pkgs/top-level/python-packages.nix
+++ b/pkgs/top-level/python-packages.nix
@@ -3121,6 +3121,8 @@ in {
 
   jupyterlab = callPackage ../development/python-modules/jupyterlab {};
 
+  jupyter-sphinx = callPackage ../development/python-modules/jupyter-sphinx { };
+
   jupytext = callPackage ../development/python-modules/jupytext { };
 
   PyLTI = callPackage ../development/python-modules/pylti { };