connectome-workbench: init at 2.0.0

pkgs/by-name/co/connectome-workbench/package.nix

@@ -0,0 +1,65 @@
+{ lib,
+  stdenv,
+  fetchFromGitHub,
+  fetchpatch,
+  cmake,
+  libGL,
+  libGLU,
+  libsForQt5,
+}:
+
+stdenv.mkDerivation (finalAttrs: {
+  pname = "connectome-workbench";
+  version = "2.0.0";
+
+  src = fetchFromGitHub {
+    owner = "Washington-University";
+    repo = "workbench";
+    rev = "refs/tags/v${finalAttrs.version}";
+    hash = "sha256-d0J5bXp6mJlUQBmInxPXPkd5P5H+3F6fE9fc8pD1fUc=";
+  };
+
+  sourceRoot = "${finalAttrs.src.name}/src";
+
+  patches = [
+    # remove after next release:
+    (fetchpatch {
+      name = "fix-missing-includes-in-CZIlib";
+      url = "https://github.com/Washington-University/workbench/commit/7ba3345d161d567a4b628ceb02ab4471fc96cb20.diff";
+      hash = "sha256-DMrJOr/2Wr4o4Z3AuhWfMZTX8f/kOYWwZQzBUwIrTd8=";
+      relative = "src";
+    })
+  ];
+
+  postPatch = ''
+    substituteInPlace CMakeLists.txt  \
+      --replace-fail "ADD_SUBDIRECTORY ( Tests )" ""  \
+      --replace-fail "ENABLE_TESTING()" ""
+  '';
+  # tests are minimal and test_driver fails to link (also -DBUILD_TESTING=... is ignored):
+  # ld: ../Brain/libBrain.a(BrainOpenGLVolumeObliqueSliceDrawing.cxx.o): undefined reference to symbol 'glGetFloatv'
+  # ld: /nix/store/a5vcvrkh1c2ng5kr584g3zw3991vnhks-libGL-1.7.0/lib/libGL.so.1: error adding symbols: DSO missing from command line
+
+  nativeBuildInputs = [
+    cmake
+    libsForQt5.wrapQtAppsHook
+  ];
+
+  buildInputs = [
+    libGL
+    libGLU
+  ] ++ (with libsForQt5; [
+    qtbase
+  ]);
+  # note: we should be able to unvendor a few libs (ftgl, quazip, qwt) but they aren't detected properly
+
+  meta = {
+    description = "Visualization and discovery tool used to map neuroimaging data";
+    homepage = "https://www.humanconnectome.org/software/connectome-workbench";
+    license = with lib.licenses; [ gpl2Plus gpl3Plus mit ];
+    changelog = "https://github.com/Washington-University/workbench/releases/tag/v${finalAttrs.version}";
+    maintainers = with lib.maintainers; [ bcdarwin ];
+    mainProgram = "wb_command";
+    platforms = lib.platforms.linux;
+  };
+})