From ed16fb06cef1fbcf055d7877fa129c8e08b27cae Mon Sep 17 00:00:00 2001
From: Doron Behar <doron.behar@gmail.com>
Date: Mon, 21 Sep 2020 13:24:04 +0300
Subject: [PATCH 1/3] qrupdate: Add @doronbehar as maintainer

---
 pkgs/development/libraries/qrupdate/default.nix | 1 +
 1 file changed, 1 insertion(+)

diff --git a/pkgs/development/libraries/qrupdate/default.nix b/pkgs/development/libraries/qrupdate/default.nix
index 424502dce0d4..33d98a492cd8 100644
--- a/pkgs/development/libraries/qrupdate/default.nix
+++ b/pkgs/development/libraries/qrupdate/default.nix
@@ -37,6 +37,7 @@ stdenv.mkDerivation {
     description = "Library for fast updating of qr and cholesky decompositions";
     homepage = "https://sourceforge.net/projects/qrupdate/";
     license = licenses.gpl3;
+    maintainers = with maintainers; [ doronbehar ];
     platforms = platforms.unix;
   };
 }

From 9c3f7ad85bf9f823a11d69c41c188135b2ebe7a8 Mon Sep 17 00:00:00 2001
From: Doron Behar <doron.behar@gmail.com>
Date: Mon, 21 Sep 2020 13:21:13 +0300
Subject: [PATCH 2/3] qrupdate: Add `which` to native build inputs

The build won't fail without it, but it's needed according to:
https://sourceforge.net/p/qrupdate/code/HEAD/tree/test/report_results
---
 pkgs/development/libraries/qrupdate/default.nix | 3 +++
 1 file changed, 3 insertions(+)

diff --git a/pkgs/development/libraries/qrupdate/default.nix b/pkgs/development/libraries/qrupdate/default.nix
index 33d98a492cd8..99fe1289eae5 100644
--- a/pkgs/development/libraries/qrupdate/default.nix
+++ b/pkgs/development/libraries/qrupdate/default.nix
@@ -3,6 +3,7 @@
 , gfortran
 , blas
 , lapack
+, which
 }:
 stdenv.mkDerivation {
   name = "qrupdate-1.1.2";
@@ -33,6 +34,8 @@ stdenv.mkDerivation {
 
   buildInputs = [ gfortran blas lapack ];
 
+  nativeBuildInputs = [ which ];
+
   meta = with stdenv.lib; {
     description = "Library for fast updating of qr and cholesky decompositions";
     homepage = "https://sourceforge.net/projects/qrupdate/";

From 81093774683e63f82c63f05784cd39bc4d3f53ab Mon Sep 17 00:00:00 2001
From: Doron Behar <doron.behar@gmail.com>
Date: Wed, 23 Sep 2020 00:20:47 +0300
Subject: [PATCH 3/3] qrupdate: refactor & assert compatible blas && lapack

Use `pname` and `version`. Use my preferred indentation style. Use
makeFlagsArray in preBuild instead of overriding configurePhase, per:
https://github.com/jtojnar/nixpkgs-hammering/blob/master/explanations/explicit-phases.md

Assert that lapack and blas are compatible regarding 64 bit indexing, do
it near evaluation of preBuild, per jtojnar's explanation:
https://github.com/NixOS/nixpkgs/pull/94892#discussion_r471110250

Use gpl3Plus, as gpl3 is unclear and deprecated.
---
 .../libraries/qrupdate/default.nix            | 41 +++++++++++--------
 1 file changed, 25 insertions(+), 16 deletions(-)

diff --git a/pkgs/development/libraries/qrupdate/default.nix b/pkgs/development/libraries/qrupdate/default.nix
index 99fe1289eae5..90d4cb45ce2a 100644
--- a/pkgs/development/libraries/qrupdate/default.nix
+++ b/pkgs/development/libraries/qrupdate/default.nix
@@ -5,24 +5,33 @@
 , lapack
 , which
 }:
-stdenv.mkDerivation {
-  name = "qrupdate-1.1.2";
+
+stdenv.mkDerivation rec {
+  pname = "qrupdate";
+  version = "1.1.2";
   src = fetchurl {
-    url = "mirror://sourceforge/qrupdate/qrupdate-1.1.2.tar.gz";
+    url = "mirror://sourceforge/qrupdate/${pname}-${version}.tar.gz";
     sha256 = "024f601685phcm1pg8lhif3lpy5j9j0k6n0r46743g4fvh8wg8g2";
   };
 
-  configurePhase =
-    ''
-      export PREFIX=$out
-      sed -i -e 's,^BLAS=.*,BLAS=-L${blas}/lib -lblas,' \
-          -e 's,^LAPACK=.*,LAPACK=-L${lapack}/lib -llapack,' \
-          Makeconf
-    ''
-    + stdenv.lib.optionalString blas.isILP64
-    ''
-      sed -i Makeconf -e '/^FFLAGS=.*/ s/$/-fdefault-integer-8/'
-    '';
+  preBuild =
+    # Check that blas and lapack are compatible
+    assert (blas.isILP64 == lapack.isILP64);
+  # We don't have structuredAttrs yet implemented, and we need to use space
+  # seprated values in makeFlags, so only this works.
+  ''
+    makeFlagsArray+=(
+      "LAPACK=-L${lapack}/lib -llapack"
+      "BLAS=-L${blas}/lib -lblas"
+      "PREFIX=${placeholder "out"}"
+      ${stdenv.lib.optionalString blas.isILP64
+      # Use their FFLAGS along with `-fdefault-integer-8`. If another
+      # application intends to use arpack, it should add this to it's FFLAGS as
+      # well. Otherwise (e.g): https://savannah.gnu.org/bugs/?50339
+      "FFLAGS=-fimplicit-none -O3 -funroll-loops -fdefault-integer-8"
+      }
+    )
+  '';
 
   doCheck = true;
 
@@ -32,14 +41,14 @@ stdenv.mkDerivation {
 
   installTargets = stdenv.lib.optionals stdenv.isDarwin [ "install-staticlib" "install-shlib" ];
 
-  buildInputs = [ gfortran blas lapack ];
+  buildInputs = [ gfortran ];
 
   nativeBuildInputs = [ which ];
 
   meta = with stdenv.lib; {
     description = "Library for fast updating of qr and cholesky decompositions";
     homepage = "https://sourceforge.net/projects/qrupdate/";
-    license = licenses.gpl3;
+    license = licenses.gpl3Plus;
     maintainers = with maintainers; [ doronbehar ];
     platforms = platforms.unix;
   };