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Merge pull request #107286 from doronbehar/pkg/octave/sundials

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Doron Behar 2021-01-05 08:26:19 +02:00 committed by GitHub
commit a334367ecd
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1 changed files with 32 additions and 25 deletions
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57
pkgs/development/libraries/sundials/default.nix
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@ -1,6 +1,7 @@
{ stdenv { stdenv
, cmake , cmake
, fetchurl , fetchurl
, fetchpatch
, python , python
, blas , blas
, lapack , lapack
@ -12,7 +13,25 @@
stdenv.mkDerivation rec { stdenv.mkDerivation rec {
pname = "sundials"; pname = "sundials";
version = "5.3.0"; version = "5.6.1";
outputs = [ "out" "examples" ];
src = fetchurl {
url = "https://computation.llnl.gov/projects/${pname}/download/${pname}-${version}.tar.gz";
sha256 = "Frd5mex+fyFXqh0Eyh3kojccqBUOBW0klR0MWJZvKoM=";
};
patches = [
# Fixing an upstream regression in treating cmake prefix directories:
# https://github.com/LLNL/sundials/pull/58
(fetchpatch {
url = "https://github.com/LLNL/sundials/commit/dd32ff9baa05618f36e44aadb420bbae4236ea1e.patch";
sha256 = "kToAuma+2iHFyL1v/l29F3+nug4AdK5cPG6IcXv2afc=";
})
];
nativeBuildInputs = [ cmake ];
buildInputs = [ buildInputs = [
python python
@ -31,36 +50,24 @@ stdenv.mkDerivation rec {
suitesparse suitesparse
]; ];
nativeBuildInputs = [ cmake ];
src = fetchurl {
url = "https://computation.llnl.gov/projects/${pname}/download/${pname}-${version}.tar.gz";
sha256 = "19xwi7pz35s2nqgldm6r0jl2k0bs36zhbpnmmzc56s1n3bhzgpw8";
};
patches = [
(fetchurl {
# https://github.com/LLNL/sundials/pull/19
url = "https://github.com/LLNL/sundials/commit/1350421eab6c5ab479de5eccf6af2dcad1eddf30.patch";
sha256 = "0g67lixp9m85fqpb9rzz1hl1z8ibdg0ldwq5z6flj5zl8a7cw52l";
})
];
cmakeFlags = [ cmakeFlags = [
"-DEXAMPLES_INSTALL_PATH=${placeholder "out"}/share/examples" "-DEXAMPLES_INSTALL_PATH=${placeholder "examples"}/share/examples"
] ++ stdenv.lib.optionals (lapackSupport) [ ] ++ stdenv.lib.optionals (lapackSupport) [
"-DLAPACK_ENABLE=ON" "-DENABLE_LAPACK=ON"
"-DLAPACK_LIBRARIES=${lapack}/lib/liblapack${stdenv.hostPlatform.extensions.sharedLibrary}" "-DLAPACK_LIBRARIES=${lapack}/lib/liblapack${stdenv.hostPlatform.extensions.sharedLibrary}"
] ++ stdenv.lib.optionals (kluSupport) [ ] ++ stdenv.lib.optionals (kluSupport) [
"-DKLU_ENABLE=ON" "-DENABLE_KLU=ON"
"-DKLU_INCLUDE_DIR=${suitesparse.dev}/include" "-DKLU_INCLUDE_DIR=${suitesparse.dev}/include"
"-DKLU_LIBRARY_DIR=${suitesparse}/lib" "-DKLU_LIBRARY_DIR=${suitesparse}/lib"
] ++ stdenv.lib.optionals (lapackSupport && !lapack.isILP64) [ ] ++ [(
# Use the correct index type according to lapack which is supposed to be # Use the correct index type according to lapack and blas used. They are
# the same index type compatible with blas, thanks to the assertion of # already supposed to be compatible but we check both for extra safety. 64
# buildInputs # should be the default but we prefer to be explicit, for extra safety.
"-DSUNDIALS_INDEX_TYPE=int32_t" if blas.isILP64 then
] "-DSUNDIALS_INDEX_SIZE=64"
else
"-DSUNDIALS_INDEX_SIZE=32"
)]
; ;
doCheck = true; doCheck = true;