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bpp-phyl: init at 2.4.1

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This commit is contained in:
Ben Darwin 2020-03-09 22:06:05 -04:00
parent 8d712ccc16
commit a53b27829c
2 changed files with 34 additions and 0 deletions
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32
pkgs/development/libraries/science/biology/bpp-phyl/default.nix Normal file
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@ -0,0 +1,32 @@
{ stdenv, fetchFromGitHub, cmake, bpp-core, bpp-seq }:
stdenv.mkDerivation rec {
pname = "bpp-phyl";
inherit (bpp-core) version;
src = fetchFromGitHub {
owner = "BioPP";
repo = pname;
rev = "v${version}";
sha256 = "192zks6wyk903n06c2lbsscdhkjnfwms8p7jblsmk3lvjhdipb20";
};
nativeBuildInputs = [ cmake ];
buildInputs = [ bpp-core bpp-seq ];
preCheck = ''
export LD_LIBRARY_PATH=$(pwd)/src
'';
postFixup = ''
substituteInPlace $out/lib/cmake/${pname}/${pname}-targets.cmake \
--replace 'set(_IMPORT_PREFIX' '#set(_IMPORT_PREFIX'
'';
doCheck = !stdenv.isDarwin;
meta = bpp-core.meta // {
changelog = "https://github.com/BioPP/bpp-phyl/blob/master/ChangeLog";
};
}

2
pkgs/top-level/all-packages.nix
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@ -24392,6 +24392,8 @@ in
bpp-core = callPackage ../development/libraries/science/biology/bpp-core { };
bpp-phyl = callPackage ../development/libraries/science/biology/bpp-phyl { };
bpp-seq = callPackage ../development/libraries/science/biology/bpp-seq { };
cd-hit = callPackage ../applications/science/biology/cd-hit { };