From a821f7c91a6b9819a6738d6c12ea0ad4a26a1c17 Mon Sep 17 00:00:00 2001 From: Ben Darwin Date: Wed, 7 Oct 2020 15:02:34 -0400 Subject: [PATCH] ciftilib: init at 1.6.0 --- .../science/biology/ciftilib/default.nix | 36 +++++++++++++++++++ pkgs/top-level/all-packages.nix | 4 +++ 2 files changed, 40 insertions(+) create mode 100644 pkgs/development/libraries/science/biology/ciftilib/default.nix diff --git a/pkgs/development/libraries/science/biology/ciftilib/default.nix b/pkgs/development/libraries/science/biology/ciftilib/default.nix new file mode 100644 index 000000000000..797607ed8f54 --- /dev/null +++ b/pkgs/development/libraries/science/biology/ciftilib/default.nix @@ -0,0 +1,36 @@ +{ lib +, stdenv +, fetchFromGitHub +, cmake +, boost +, libxmlxx +, pkg-config +, zlib +}: + +stdenv.mkDerivation rec { + pname = "ciftilib"; + version = "1.6.0"; + + src = fetchFromGitHub { + owner = "Washington-University"; + repo = "CiftiLib"; + rev = "v${version}"; + hash = "sha256-xc2dpMse4SozYEV/w3rXCrh1LKpTThq5nHB2y5uAD0A="; + }; + + nativeBuildInputs = [ cmake pkg-config ]; + buildInputs = [ boost libxmlxx zlib ]; + + cmakeFlags = [ "-DCMAKE_CTEST_ARGUMENTS=--exclude-regex;'big|datatype-md5'" ]; + + doCheck = true; + + meta = with lib; { + homepage = "https://github.com/Washington-University/CiftiLib"; + description = "Library for reading and writing CIFTI files"; + maintainers = with maintainers; [ bcdarwin ]; + platforms = platforms.linux; + license = licenses.bsd2; + }; +} diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index e449c34634bd..6787fa90969c 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -33493,6 +33493,10 @@ with pkgs; inherit (llvmPackages) openmp; }; + ciftilib = callPackage ../development/libraries/science/biology/ciftilib { + boost = boost16x; + }; + cmtk = callPackage ../applications/science/biology/cmtk { }; clustal-omega = callPackage ../applications/science/biology/clustal-omega { };