diff --git a/pkgs/development/python-modules/dendropy/default.nix b/pkgs/development/python-modules/dendropy/default.nix new file mode 100644 index 000000000000..a455db96c22b --- /dev/null +++ b/pkgs/development/python-modules/dendropy/default.nix @@ -0,0 +1,34 @@ +{ lib +, pkgs +, buildPythonPackage +, fetchPypi +}: + +buildPythonPackage rec { + pname = "DendroPy"; + version = "4.3.0"; + + src = fetchPypi { + inherit pname version; + sha256 = "bd5b35ce1a1c9253209b7b5f3939ac22beaa70e787f8129149b4f7ffe865d510"; + }; + + prePatch = '' + # Test removed/disabled and reported upstream: https://github.com/jeetsukumaran/DendroPy/issues/74 + rm -f dendropy/test/test_dataio_nexml_reader_tree_list.py + ''; + + preCheck = '' + # Needed for unicode python tests + export LC_ALL="en_US.UTF-8" + ''; + + checkInputs = [ pkgs.glibcLocales ]; + + meta = { + homepage = http://dendropy.org/; + description = "A Python library for phylogenetic computing"; + maintainers = with lib.maintainers; [ unode ]; + license = lib.licenses.bsd3; + }; +} diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix index 7db8d5c2cd97..85fb35a8629f 100644 --- a/pkgs/top-level/python-packages.nix +++ b/pkgs/top-level/python-packages.nix @@ -203,6 +203,8 @@ in { bugseverywhere = callPackage ../applications/version-management/bugseverywhere {}; + dendropy = callPackage ../development/python-modules/dendropy { }; + dbf = callPackage ../development/python-modules/dbf { }; dbfread = callPackage ../development/python-modules/dbfread { };