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Merge remote-tracking branch 'upstream/staging' into master

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This commit is contained in:
Tuomas Tynkkynen 2017-04-24 19:25:38 +03:00
commit cf3800b38c
44 changed files with 786 additions and 471 deletions
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5
pkgs/applications/networking/browsers/qutebrowser/default.nix
View File

@ -74,11 +74,8 @@ in buildPythonApplication rec {
'';
postFixup = ''
mv $out/bin/qutebrowser $out/bin/.qutebrowser-noqtpath
makeQtWrapper $out/bin/.qutebrowser-noqtpath $out/bin/qutebrowser \
wrapQtProgram $out/bin/qutebrowser \
${lib.optionalString withWebEngineDefault ''--add-flags "--backend webengine"''}
sed -i 's/\.qutebrowser-wrapped/qutebrowser/g' $out/bin/..qutebrowser-wrapped-wrapped
'';
meta = {

3
pkgs/build-support/setup-hooks/make-wrapper.sh
View File

@ -132,6 +132,9 @@ wrapProgram() {
local prog="$1"
local hidden
hidden="$(dirname "$prog")/.$(basename "$prog")"-wrapped
while [ -e "$hidden" ]; do
hidden="${hidden}_"
done
mv "$prog" "$hidden"
# Silence warning about unexpanded $0:
# shellcheck disable=SC2016

10
pkgs/development/compilers/gcc/5/default.nix
View File

@ -237,10 +237,16 @@ stdenv.mkDerivation ({
# This should kill all the stdinc frameworks that gcc and friends like to
# insert into default search paths.
prePatch = if stdenv.isDarwin then ''
prePatch = stdenv.lib.optionalString stdenv.isDarwin ''
substituteInPlace gcc/config/darwin-c.c \
--replace 'if (stdinc)' 'if (0)'
'' else null;
substituteInPlace libgcc/config/t-slibgcc-darwin \
--replace "-install_name @shlib_slibdir@/\$(SHLIB_INSTALL_NAME)" "-install_name $lib/lib/\$(SHLIB_INSTALL_NAME)"
substituteInPlace libgfortran/configure \
--replace "-install_name \\\$rpath/\\\$soname" "-install_name $lib/lib/\\\$soname"
'';
postPatch =
if (stdenv.isGNU

12
pkgs/development/compilers/gcc/builder.sh
View File

@ -212,6 +212,7 @@ postInstall() {
# Move runtime libraries to $lib.
moveToOutput "lib/lib*.so*" "$lib"
moveToOutput "lib/lib*.la" "$lib"
moveToOutput "lib/lib*.dylib" "$lib"
moveToOutput "share/gcc-*/python" "$lib"
for i in "$lib"/lib/*.{la,py}; do
@ -221,6 +222,7 @@ postInstall() {
if [ -n "$enableMultilib" ]; then
moveToOutput "lib64/lib*.so*" "$lib"
moveToOutput "lib64/lib*.la" "$lib"
moveToOutput "lib64/lib*.dylib" "$lib"
for i in "$lib"/lib64/*.{la,py}; do
substituteInPlace "$i" --replace "$out" "$lib"
@ -251,6 +253,16 @@ postInstall() {
done
fi
if type "install_name_tool"; then
for i in "$lib"/lib/*.*.dylib; do
install_name_tool -id "$i" "$i" || true
for old_path in $(otool -L "$i" | grep "$out" | awk '{print $1}'); do
new_path=`echo "$old_path" | sed "s,$out,$lib,"`
install_name_tool -change "$old_path" "$new_path" "$i" || true
done
done
fi
# Get rid of some "fixed" header files
rm -rfv $out/lib/gcc/*/*/include-fixed/{root,linux}

19
pkgs/development/interpreters/perl/default.nix
View File

@ -36,7 +36,7 @@ let
./no-sys-dirs.patch
]
++ optional stdenv.isSunOS ./ld-shared.patch
++ optional stdenv.isDarwin [ ./cpp-precomp.patch ];
++ optional stdenv.isDarwin [ ./cpp-precomp.patch ./sw_vers.patch ];
postPatch = ''
pwd="$(type -P pwd)"
@ -121,17 +121,16 @@ let
in rec {
perl = perl522;
perl520 = common {
version = "5.20.3";
sha256 = "0jlvpd5l5nk7lzfd4akdg1sw6vinbkj6izclyyr0lrbidfky691m";
};
perl = perl524;
perl522 = common {
version = "5.22.2";
sha256 = "1hl3v85ggm027v9h2ycas4z5i3401s2k2l3qpnw8q5mahmiikbc1";
version = "5.22.3";
sha256 = "10q087l1ffdy3gpryr8z540jcnsr0dhm37raicyfqqkyvys1yd8v";
};
perl524 = common {
version = "5.24.1";
sha256 = "1bqqb5ghfj4486nqr77kgsd8aff6a289jy7n2cdkznwvn34qbhg6";
};
}

13
pkgs/development/interpreters/perl/sw_vers.patch Normal file
View File

@ -0,0 +1,13 @@
diff --git a/hints/darwin.sh b/hints/darwin.sh
index afadf53..80b7533 100644
--- a/hints/darwin.sh
+++ b/hints/darwin.sh
@@ -329,7 +329,7 @@ EOM
# sw_vers output what we want
# "ProductVersion: 10.10.5" "10.10"
# "ProductVersion: 10.11" "10.11"
- prodvers=`sw_vers|awk '/^ProductVersion:/{print $2}'|awk -F. '{print $1"."$2}'`
+ prodvers="10.10"
case "$prodvers" in
10.*)
add_macosx_version_min ccflags $prodvers

29
pkgs/development/interpreters/python/cpython/3.3/default.nix
View File

@ -50,7 +50,17 @@ in stdenv.mkDerivation {
NIX_LDFLAGS = stdenv.lib.optionalString stdenv.isLinux "-lgcc_s";
postPatch = optionalString (x11Support && (tix != null)) ''
# Determinism: The interpreter is patched to write null timestamps when compiling python files.
# This way python doesn't try to update them when we freeze timestamps in nix store.
DETERMINISTIC_BUILD=1;
# Determinism: We fix the hashes of str, bytes and datetime objects.
PYTHONHASHSEED=0;
postPatch = ''
# Determinism
substituteInPlace "Lib/py_compile.py" --replace "source_stats['mtime']" "(1 if 'DETERMINISTIC_BUILD' in os.environ else source_stats['mtime'])"
# # We do not patch `Lib/importlib/_bootstrap_external.py` because it does not exist.
'' + optionalString (x11Support && (tix != null)) ''
substituteInPlace "Lib/tkinter/tix.py" --replace "os.environ.get('TIX_LIBRARY')" "os.environ.get('TIX_LIBRARY') or '${tix}/lib'"
'';
@ -80,12 +90,17 @@ in stdenv.mkDerivation {
fi
done
touch $out/lib/python${majorVersion}/test/__init__.py
ln -s "$out/include/python${majorVersion}m" "$out/include/python${majorVersion}"
paxmark E $out/bin/python${majorVersion}
# Python on Nix is not manylinux1 compatible. https://github.com/NixOS/nixpkgs/issues/18484
echo "manylinux1_compatible=False" >> $out/lib/${libPrefix}/_manylinux.py
# Determinism: Windows installers were not deterministic.
# We're also not interested in building Windows installers.
find "$out" -name 'wininst*.exe' | xargs -r rm -f
# Use Python3 as default python
ln -s "$out/bin/idle3" "$out/bin/idle"
ln -s "$out/bin/pip3" "$out/bin/pip"
@ -93,18 +108,20 @@ in stdenv.mkDerivation {
ln -s "$out/bin/python3" "$out/bin/python"
ln -s "$out/bin/python3-config" "$out/bin/python-config"
ln -s "$out/lib/pkgconfig/python3.pc" "$out/lib/pkgconfig/python.pc"
'';
postFixup = ''
# Get rid of retained dependencies on -dev packages, and remove
# some $TMPDIR references to improve binary reproducibility.
# Note that the .pyc file of _sysconfigdata.py should be regenerated!
for i in $out/lib/python${majorVersion}/_sysconfigdata.py $out/lib/python${majorVersion}/config-${majorVersion}m/Makefile; do
sed -i $i -e "s|-I/nix/store/[^ ']*||g" -e "s|-L/nix/store/[^ ']*||g" -e "s|$TMPDIR|/no-such-path|g"
done
# FIXME: should regenerate this.
rm $out/lib/python${majorVersion}/__pycache__/_sysconfigdata.cpython*
# Determinism: rebuild all bytecode
# We exclude lib2to3 because that's Python 2 code which fails
# We rebuild three times, once for each optimization level
find $out -name "*.py" | $out/bin/python -m compileall -q -f -x "lib2to3" -i -
find $out -name "*.py" | $out/bin/python -O -m compileall -q -f -x "lib2to3" -i -
find $out -name "*.py" | $out/bin/python -OO -m compileall -q -f -x "lib2to3" -i -
'';
passthru = let

19
pkgs/development/interpreters/python/cpython/3.4/default.nix
View File

@ -132,6 +132,13 @@ in stdenv.mkDerivation {
ln -s "$out/bin/python3-config" "$out/bin/python-config"
ln -s "$out/lib/pkgconfig/python3.pc" "$out/lib/pkgconfig/python.pc"
# Get rid of retained dependencies on -dev packages, and remove
# some $TMPDIR references to improve binary reproducibility.
# Note that the .pyc file of _sysconfigdata.py should be regenerated!
for i in $out/lib/python${majorVersion}/_sysconfigdata.py $out/lib/python${majorVersion}/config-${majorVersion}m/Makefile; do
sed -i $i -e "s|-I/nix/store/[^ ']*||g" -e "s|-L/nix/store/[^ ']*||g" -e "s|$TMPDIR|/no-such-path|g"
done
# Determinism: rebuild all bytecode
# We exclude lib2to3 because that's Python 2 code which fails
# We rebuild three times, once for each optimization level
@ -140,18 +147,6 @@ in stdenv.mkDerivation {
find $out -name "*.py" | $out/bin/python -OO -m compileall -q -f -x "lib2to3" -i -
'';
postFixup = ''
# Get rid of retained dependencies on -dev packages, and remove
# some $TMPDIR references to improve binary reproducibility.
for i in $out/lib/python${majorVersion}/_sysconfigdata.py $out/lib/python${majorVersion}/config-${majorVersion}m/Makefile; do
sed -i $i -e "s|-I/nix/store/[^ ']*||g" -e "s|-L/nix/store/[^ ']*||g" -e "s|$TMPDIR|/no-such-path|g"
done
# FIXME: should regenerate this.
rm $out/lib/python${majorVersion}/__pycache__/_sysconfigdata.cpython*
'';
passthru = let
pythonPackages = callPackage ../../../../../top-level/python-packages.nix {python=self; overrides=packageOverrides;};
in rec {

18
pkgs/development/interpreters/python/cpython/3.5/default.nix
View File

@ -134,6 +134,13 @@ in stdenv.mkDerivation {
ln -s "$out/bin/python3-config" "$out/bin/python-config"
ln -s "$out/lib/pkgconfig/python3.pc" "$out/lib/pkgconfig/python.pc"
# Get rid of retained dependencies on -dev packages, and remove
# some $TMPDIR references to improve binary reproducibility.
# Note that the .pyc file of _sysconfigdata.py should be regenerated!
for i in $out/lib/python${majorVersion}/_sysconfigdata.py $out/lib/python${majorVersion}/config-${majorVersion}m/Makefile; do
sed -i $i -e "s|-I/nix/store/[^ ']*||g" -e "s|-L/nix/store/[^ ']*||g" -e "s|$TMPDIR|/no-such-path|g"
done
# Determinism: rebuild all bytecode
# We exclude lib2to3 because that's Python 2 code which fails
# We rebuild three times, once for each optimization level
@ -142,17 +149,6 @@ in stdenv.mkDerivation {
find $out -name "*.py" | $out/bin/python -OO -m compileall -q -f -x "lib2to3" -i -
'';
postFixup = ''
# Get rid of retained dependencies on -dev packages, and remove
# some $TMPDIR references to improve binary reproducibility.
for i in $out/lib/python${majorVersion}/_sysconfigdata.py $out/lib/python${majorVersion}/config-${majorVersion}m/Makefile; do
sed -i $i -e "s|-I/nix/store/[^ ']*||g" -e "s|-L/nix/store/[^ ']*||g" -e "s|$TMPDIR|/no-such-path|g"
done
# FIXME: should regenerate this.
rm $out/lib/python${majorVersion}/__pycache__/_sysconfigdata.cpython*
'';
passthru = let
pythonPackages = callPackage ../../../../../top-level/python-packages.nix {python=self; overrides=packageOverrides;};
in rec {

7
pkgs/development/interpreters/python/cpython/3.6/default.nix
View File

@ -126,6 +126,13 @@ in stdenv.mkDerivation {
ln -s "$out/bin/python3-config" "$out/bin/python-config"
ln -s "$out/lib/pkgconfig/python3.pc" "$out/lib/pkgconfig/python.pc"
# Get rid of retained dependencies on -dev packages, and remove
# some $TMPDIR references to improve binary reproducibility.
# Note that the .pyc file of _sysconfigdata.py should be regenerated!
for i in $out/lib/python${majorVersion}/_sysconfigdata*.py $out/lib/python${majorVersion}/config-${majorVersion}m*/Makefile; do
sed -i $i -e "s|-I/nix/store/[^ ']*||g" -e "s|-L/nix/store/[^ ']*||g" -e "s|$TMPDIR|/no-such-path|g"
done
# Determinism: rebuild all bytecode
# We exclude lib2to3 because that's Python 2 code which fails
# We rebuild three times, once for each optimization level

4
pkgs/development/libraries/dbus/default.nix
View File

@ -6,8 +6,8 @@ assert x11Support -> libX11 != null
&& libSM != null;
let
version = "1.10.16";
sha256 = "121kqkjsd3vgf8vca8364xl44qa5086h7qy5zs5f1l78ldpbmc57";
version = "1.10.18";
sha256 = "0jjirhw6xwz2ffmbg5kr79108l8i1bdaw7szc67n3qpkygaxsjb0";
self = stdenv.mkDerivation {
name = "dbus-${version}";

6
pkgs/development/libraries/glib/default.nix
View File

@ -42,8 +42,8 @@ let
ln -sr -t "''${!outputInclude}/include/" "''${!outputInclude}"/lib/*/include/* 2>/dev/null || true
'';
ver_maj = "2.50";
ver_min = "3";
ver_maj = "2.52";
ver_min = "1";
in
stdenv.mkDerivation rec {
@ -51,7 +51,7 @@ stdenv.mkDerivation rec {
src = fetchurl {
url = "mirror://gnome/sources/glib/${ver_maj}/${name}.tar.xz";
sha256 = "82ee94bf4c01459b6b00cb9db0545c2237921e3060c0b74cff13fbc020cfd999";
sha256 = "948c26b817f2d77e2a6cdd5082c60a51bf5dea854890286a1d5d4ccde5ce586f";
};
patches = optional stdenv.isDarwin ./darwin-compilation.patch ++ optional doCheck ./skip-timer-test.patch;

4
pkgs/development/libraries/gtk+/3.x.nix
View File

@ -13,7 +13,7 @@ with stdenv.lib;
let
ver_maj = "3.22";
ver_min = "11";
ver_min = "12";
version = "${ver_maj}.${ver_min}";
in
stdenv.mkDerivation rec {
@ -21,7 +21,7 @@ stdenv.mkDerivation rec {
src = fetchurl {
url = "mirror://gnome/sources/gtk+/${ver_maj}/gtk+-${version}.tar.xz";
sha256 = "db440670cb6f3c098b076df3735fbc4e69359bd605385e87c90ee48344a804ca";
sha256 = "84fae0cefb6a11ee2b4e86b8ac42fe46a3d30b4ad16661d5fc51e8ae03e2a98c";
};
outputs = [ "out" "dev" ];

4
pkgs/development/libraries/harfbuzz/default.nix
View File

@ -5,7 +5,7 @@
}:
let
version = "1.4.4";
version = "1.4.5";
inherit (stdenv.lib) optional optionals optionalString;
in
@ -14,7 +14,7 @@ stdenv.mkDerivation {
src = fetchurl {
url = "http://www.freedesktop.org/software/harfbuzz/release/harfbuzz-${version}.tar.bz2";
sha256 = "0mfj37qr8fw9mzsvk4296fq8vzq909mwlkl2xrjfrfvc8z5gilim";
sha256 = "d0e05438165884f21658154c709075feaf98c93ee5c694b951533ac425a9a711";
};
outputs = [ "out" "dev" ];

4
pkgs/development/libraries/libav/default.nix
View File

@ -27,7 +27,7 @@ let inherit (stdenv.lib) optional optionals hasPrefix; in
let
result = {
libav_0_8 = libavFun "0.8.20" "0c7a2417c3a01eb74072691bb93ce802ae1be08f";
libav_11 = libavFun "11.8" "d0e93f6b229ae46c49d13ec183b13cfee70a51f0";
libav_11 = libavFun "11.9" "36ed1329099676ff3c970576e03c6a21f2da2e15";
libav_12 = libavFun "12" "4ecde7274621c82a6882b7614d907b28de25cc4e";
};
@ -41,7 +41,7 @@ let
patches = []
++ optional (vpxSupport && hasPrefix "0.8." version) ./vpxenc-0.8.17-libvpx-1.5.patch
++ optional (vpxSupport && hasPrefix "11." version) ./vpxenc-11.6-libvpx-1.5.patch;
;
preConfigure = "patchShebangs doc/texi2pod.pl";

22
pkgs/development/libraries/libav/vpxenc-11.6-libvpx-1.5.patch
View File

@ -1,22 +0,0 @@
--- a/libavcodec/libvpxenc.c 2016-05-01 17:53:17.974517377 +0200
+++ b/libavcodec/libvpxenc.c 2016-05-01 17:54:30.564923297 +0200
@@ -70,19 +70,11 @@
/** String mappings for enum vp8e_enc_control_id */
static const char *const ctlidstr[] = {
- [VP8E_UPD_ENTROPY] = "VP8E_UPD_ENTROPY",
- [VP8E_UPD_REFERENCE] = "VP8E_UPD_REFERENCE",
- [VP8E_USE_REFERENCE] = "VP8E_USE_REFERENCE",
- [VP8E_SET_ROI_MAP] = "VP8E_SET_ROI_MAP",
- [VP8E_SET_ACTIVEMAP] = "VP8E_SET_ACTIVEMAP",
- [VP8E_SET_SCALEMODE] = "VP8E_SET_SCALEMODE",
[VP8E_SET_CPUUSED] = "VP8E_SET_CPUUSED",
[VP8E_SET_ENABLEAUTOALTREF] = "VP8E_SET_ENABLEAUTOALTREF",
[VP8E_SET_NOISE_SENSITIVITY] = "VP8E_SET_NOISE_SENSITIVITY",
- [VP8E_SET_SHARPNESS] = "VP8E_SET_SHARPNESS",
[VP8E_SET_STATIC_THRESHOLD] = "VP8E_SET_STATIC_THRESHOLD",
[VP8E_SET_TOKEN_PARTITIONS] = "VP8E_SET_TOKEN_PARTITIONS",
- [VP8E_GET_LAST_QUANTIZER] = "VP8E_GET_LAST_QUANTIZER",
[VP8E_SET_ARNR_MAXFRAMES] = "VP8E_SET_ARNR_MAXFRAMES",
[VP8E_SET_ARNR_STRENGTH] = "VP8E_SET_ARNR_STRENGTH",
[VP8E_SET_ARNR_TYPE] = "VP8E_SET_ARNR_TYPE",

6
pkgs/development/libraries/libssh/default.nix
View File

@ -1,11 +1,11 @@
{ stdenv, fetchurl, pkgconfig, cmake, zlib, openssl, libsodium }:
stdenv.mkDerivation rec {
name = "libssh-0.7.4";
name = "libssh-0.7.5";
src = fetchurl {
url = "https://red.libssh.org/attachments/download/210/${name}.tar.xz";
sha256 = "03bcp9ksqp0s1pmwfmzhcknvkxay5k0mjzzxp3rjlifbng1vxq9r";
url = "https://red.libssh.org/attachments/download/218/${name}.tar.xz";
sha256 = "15bh6dm9c50ndddzh3gqcgw7axp3ghrspjpkb1z3dr90vkanvs2l";
};
postPatch = ''

4
pkgs/development/libraries/mesa/default.nix
View File

@ -67,7 +67,7 @@ let
in
let
version = "17.0.3";
version = "17.0.4";
branch = head (splitString "." version);
driverLink = "/run/opengl-driver" + optionalString stdenv.isi686 "-32";
in
@ -82,7 +82,7 @@ stdenv.mkDerivation {
"ftp://ftp.freedesktop.org/pub/mesa/older-versions/${branch}.x/${version}/mesa-${version}.tar.xz"
"https://launchpad.net/mesa/trunk/${version}/+download/mesa-${version}.tar.xz"
];
sha256 = "ca646f5075a002d60ef9123c8a4331cede155c01712ef945a65c59a5e69fe7ed";
sha256 = "1269dc8545a193932a0779b2db5bce9be4a5f6813b98c38b93b372be8362a346";
};
prePatch = "patchShebangs .";

4
pkgs/development/libraries/pango/default.nix
View File

@ -6,14 +6,14 @@ with stdenv.lib;
let
ver_maj = "1.40";
ver_min = "4";
ver_min = "5";
in
stdenv.mkDerivation rec {
name = "pango-${ver_maj}.${ver_min}";
src = fetchurl {
url = "mirror://gnome/sources/pango/${ver_maj}/${name}.tar.xz";
sha256 = "f8fdc5fc66356dc4edf915048cceeee065a0e0cb70b3b2598f62bda320129a3e";
sha256 = "24748140456c42360b07b2c77a1a2e1216d07c056632079557cd4e815b9d01c9";
};
outputs = [ "bin" "dev" "out" "devdoc" ];

24
pkgs/development/python-modules/asn1crypto/default.nix Normal file
View File

@ -0,0 +1,24 @@
{ lib
, buildPythonPackage
, fetchPypi
}:
buildPythonPackage rec {
pname = "asn1crypto";
version = "0.22.0";
name = "${pname}-${version}";
src = fetchPypi {
inherit pname version;
sha256 = "cbbadd640d3165ab24b06ef25d1dca09a3441611ac15f6a6b452474fdf0aed1a";
};
# No tests included
doCheck = false;
meta = {
description = "Fast ASN.1 parser and serializer with definitions for private keys, public keys, certificates, CRL, OCSP, CMS, PKCS#3, PKCS#7, PKCS#8, PKCS#12, PKCS#5, X.509 and TSP";
license = lib.licenses.mit;
homepage = https://github.com/wbond/asn1crypto;
};
}

4
pkgs/development/python-modules/hypothesis.nix
View File

@ -10,14 +10,14 @@ buildPythonPackage rec {
# If you need these, you can just add them to your environment.
name = "hypothesis-${version}";
version = "3.6.1";
version = "3.7.0";
# Upstream prefers github tarballs
src = fetchFromGitHub {
owner = "HypothesisWorks";
repo = "hypothesis";
rev = "${version}";
sha256 = "1zwr9g4h4jizbvm2d7fywdpcxmw8i1m85h8g72kizah07gk12aq1";
sha256 = "1zsv1ggf3g9rrigxl3zd1z8qc6fcj8lmszm8ib1ya4ar6r64x0yz";
};
buildInputs = stdenv.lib.optionals doCheck [ pytest flake8 flaky ];

43
pkgs/development/python-modules/ipykernel/default.nix Normal file
View File

@ -0,0 +1,43 @@
{ lib
, buildPythonPackage
, fetchPypi
, nose
, isPy27
, mock
, ipython
, jupyter_client
, pexpect
, traitlets
, tornado
}:
buildPythonPackage rec {
pname = "ipykernel";
version = "4.6.1";
name = "${pname}-${version}";
src = fetchPypi {
inherit pname version;
sha256 = "2e1825aca4e2585b5adb7953ea16e53f53a62159ed49952a564b1e23507205db";
};
buildInputs = [ nose ] ++ lib.optional isPy27 mock;
propagatedBuildInputs = [
ipython
jupyter_client
pexpect
traitlets
tornado
];
# Tests require backends.
# I don't want to add all supported backends as propagatedBuildInputs
doCheck = false;
meta = {
description = "IPython Kernel for Jupyter";
homepage = http://ipython.org/;
license = lib.licenses.bsd3;
maintainers = with lib.maintainers; [ fridh ];
};
}

41
pkgs/development/python-modules/ipyparallel/default.nix Normal file
View File

@ -0,0 +1,41 @@
{ lib
, buildPythonPackage
, fetchPypi
, nose
, dateutil
, ipython_genutils
, decorator
, pyzmq
, ipython
, jupyter_client
, ipykernel
, tornado
, isPy3k
, futures
}:
buildPythonPackage rec {
pname = "ipyparallel";
version = "6.0.2";
name = "${pname}-${version}";
src = fetchPypi {
inherit pname version;
sha256 = "7eea4780266252fcc987b220a302d589fbb4d6b0569bd131115a20b31891103d";
};
buildInputs = [ nose ];
propagatedBuildInputs = [ dateutil ipython_genutils decorator pyzmq ipython jupyter_client ipykernel tornado
] ++ lib.optionals (!isPy3k) [ futures ];
# Requires access to cluster
doCheck = false;
meta = {
description = "Interactive Parallel Computing with IPython";
homepage = http://ipython.org/;
license = lib.licenses.bsd3;
maintainers = with lib.maintainers; [ fridh ];
};
}

71
pkgs/development/python-modules/ipython/default.nix Normal file
View File

@ -0,0 +1,71 @@
{ lib
, stdenv
, buildPythonPackage
, fetchPypi
, pythonOlder
# Build dependencies
, glibcLocales
# Test dependencies
, nose
, pygments
, isPy27
, mock
# Runtime dependencies
, jedi
, decorator
, pickleshare
, simplegeneric
, traitlets
, prompt_toolkit
, pexpect
, appnope
}:
buildPythonPackage rec {
pname = "ipython";
version = "6.0.0";
name = "${pname}-${version}";
src = fetchPypi {
inherit pname version;
sha256 = "f429b82b8d9807068da734b15965768bd21b15d0b706340b6d1b4d6f6f5b98a4";
};
prePatch = lib.optionalString stdenv.isDarwin ''
substituteInPlace setup.py --replace "'gnureadline'" " "
'';
buildInputs = [ glibcLocales ];
checkInputs = [ nose pygments ] ++ lib.optional isPy27 mock;
propagatedBuildInputs = [
jedi
decorator
pickleshare
simplegeneric
traitlets
prompt_toolkit
pexpect
] ++ lib.optionals stdenv.isDarwin [appnope];
LC_ALL="en_US.UTF-8";
doCheck = false; # Circular dependency with ipykernel
checkPhase = ''
nosetests
'';
# IPython 6.0.0 and above does not support Python < 3.3.
# The last IPython version to support older Python versions
# is 5.3.x.
disabled = pythonOlder "3.3";
meta = {
description = "IPython: Productive Interactive Computing";
homepage = http://ipython.org/;
license = lib.licenses.bsd3;
maintainers = with lib.maintainers; [ bjornfor jgeerds fridh ];
};
}

47
pkgs/development/python-modules/ipywidgets/default.nix Normal file
View File

@ -0,0 +1,47 @@
{ lib
, buildPythonPackage
, fetchPypi
, python
, nose
, pytest
, mock
, ipython
, ipykernel
, traitlets
, notebook
, widgetsnbextension
}:
buildPythonPackage rec {
pname = "ipywidgets";
version = "6.0.0";
name = "${pname}-${version}";
src = fetchPypi {
inherit pname version;
sha256 = "afa6248850cff14ef86117db87aeab0b12237e4eaf740e73716460ed593a43a7";
};
# Tests are not distributed
# doCheck = false;
buildInputs = [ nose pytest mock ];
propagatedBuildInputs = [
ipython
ipykernel
traitlets
notebook
widgetsnbextension
];
checkPhase = ''
${python.interpreter} -m unittest discover
'';
meta = {
description = "IPython HTML widgets for Jupyter";
homepage = http://ipython.org/;
license = lib.licenses.bsd3;
maintainers = with lib.maintainers; [ fridh ];
};
}

32
pkgs/development/python-modules/jedi/default.nix Normal file
View File

@ -0,0 +1,32 @@
{ lib
, buildPythonPackage
, fetchPypi
, pytest
}:
buildPythonPackage rec {
pname = "jedi";
version = "0.10.2";
name = "${pname}-${version}";
src = fetchPypi {
inherit pname version;
sha256 = "7abb618cac6470ebbd142e59c23daec5e6e063bfcecc8a43a037d2ab57276f4e";
};
checkInputs = [ pytest ];
checkPhase = ''
py.test test
'';
# 7 failed
#doCheck = false;
meta = {
homepage = https://github.com/davidhalter/jedi;
description = "An autocompletion tool for Python that can be used for text editors";
license = lib.licenses.lgpl3Plus;
maintainers = with lib.maintainers; [ garbas ];
};
}

39
pkgs/development/python-modules/jupyter_client/default.nix Normal file
View File

@ -0,0 +1,39 @@
{ lib
, buildPythonPackage
, fetchPypi
, nose
, traitlets
, jupyter_core
, pyzmq
, dateutil
, isPyPy
, py
}:
buildPythonPackage rec {
pname = "jupyter_client";
version = "5.0.1";
name = "${pname}-${version}";
src = fetchPypi {
inherit pname version;
sha256 = "1fe573880b5ca4469ed0bece098f4b910c373d349e12525e1ea3566f5a14536b";
};
buildInputs = [ nose ];
propagatedBuildInputs = [traitlets jupyter_core pyzmq dateutil] ++ lib.optional isPyPy py;
checkPhase = ''
nosetests -v
'';
# Circular dependency with ipykernel
doCheck = false;
meta = {
description = "Jupyter protocol implementation and client libraries";
homepage = http://jupyter.org/;
license = lib.licenses.bsd3;
maintainers = with lib.maintainers; [ fridh ];
};
}

28
pkgs/development/python-modules/line_profiler/default.nix Normal file
View File

@ -0,0 +1,28 @@
{ lib
, buildPythonPackage
, fetchPypi
, cython
, isPyPy
}:
buildPythonPackage rec {
pname = "line_profiler";
version = "2.0";
name = "${pname}-${version}";
src = fetchPypi {
inherit pname version;
sha256 = "739f8ad0e4bcd0cb82e99afc09e00a0351234f6b3f0b1f7f0090a8a2fbbf8381";
};
buildInputs = [ cython ];
disabled = isPyPy;
meta = {
description = "Line-by-line profiler";
homepage = https://github.com/rkern/line_profiler;
license = lib.licenses.bsd3;
maintainers = with lib.maintainers; [ fridh ];
};
}

4
pkgs/development/python-modules/llvmlite/default.nix
View File

@ -11,13 +11,13 @@
buildPythonPackage rec {
pname = "llvmlite";
name = "${pname}-${version}";
version = "0.15.0";
version = "0.16.0";
disabled = isPyPy;
src = fetchurl {
url = "mirror://pypi/${builtins.substring 0 1 pname}/${pname}/${name}.tar.gz";
sha256 = "c855835537eda61f3a0d19aedc44f006d5084a2d322aee8ffa87aa06bb800dc4";
sha256 = "ef3bae32482f91742d91571b5225a6943804291eb9405b98090a7b50942ec5e9";
};
propagatedBuildInputs = [ llvm ] ++ stdenv.lib.optional (pythonOlder "3.4") enum34;

52
pkgs/development/python-modules/notebook/default.nix Normal file
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@ -0,0 +1,52 @@
{ lib
, buildPythonPackage
, fetchPypi
, nose
, glibcLocales
, isPy27
, mock
, jinja2
, tornado
, ipython_genutils
, traitlets
, jupyter_core
, jupyter_client
, nbformat
, nbconvert
, ipykernel
, terminado
, requests2
, pexpect
}:
buildPythonPackage rec {
pname = "notebook";
version = "5.0.0";
name = "${pname}-${version}";
src = fetchPypi {
inherit pname version;
sha256 = "1cea3bbbd03c8e5842a1403347a8cc8134486b3ce081a2e5b1952a00ea66ed54";
};
LC_ALL = "en_US.UTF-8";
buildInputs = [nose glibcLocales] ++ lib.optionals isPy27 [mock];
propagatedBuildInputs = [jinja2 tornado ipython_genutils traitlets jupyter_core
jupyter_client nbformat nbconvert ipykernel terminado requests2 pexpect ];
checkPhase = ''
nosetests -v
'';
# Certain tests fail due to being in a chroot.
# PermissionError
doCheck = false;
meta = {
description = "The Jupyter HTML notebook is a web-based notebook environment for interactive computing";
homepage = http://jupyter.org/;
license = lib.licenses.bsd3;
maintainers = with lib.maintainers; [ fridh ];
};
}

4
pkgs/development/python-modules/numba/default.nix
View File

@ -14,12 +14,12 @@
}:
buildPythonPackage rec {
version = "0.30.1";
version = "0.31.0";
name = "numba-${version}";
src = fetchurl {
url = "mirror://pypi/n/numba/${name}.tar.gz";
sha256 = "66e6254b3002f448fd212c5df4c8a69964dff9b9f315fb733e3c95e7e2b6c8fd";
sha256 = "69f8ecacca687e89625abbc9f9ff2b64b3cc8649c284a3bc92f2df6dc82a7c80";
};
NIX_CFLAGS_COMPILE = stdenv.lib.optionalString stdenv.isDarwin "-I${libcxx}/include/c++/v1";

5
pkgs/development/python-modules/pandas/default.nix
View File

@ -56,7 +56,7 @@ in buildPythonPackage rec {
# For OSX, we need to add a dependency on libcxx, which provides
# `complex.h` and other libraries that pandas depends on to build.
patchPhase = optionalString isDarwin ''
postPatch = optionalString isDarwin ''
cpp_sdk="${libcxx}/include/c++/v1";
echo "Adding $cpp_sdk to the setup.py common_include variable"
substituteInPlace setup.py \
@ -71,12 +71,11 @@ in buildPythonPackage rec {
# The flag `-A 'not network'` will disable tests that use internet.
# The `-e` flag disables a few problematic tests.
checkPhase = ''
runHook preCheck
# The flag `-w` provides the initial directory to search for tests.
# The flag `-A 'not network'` will disable tests that use internet.
nosetests -w $out/${python.sitePackages}/pandas --no-path-adjustment -A 'not slow and not network' --stop \
nosetests -w $out/${python.sitePackages}/pandas --no-path-adjustment -A 'not slow and not network' \
--verbosity=3
runHook postCheck
'';

1
pkgs/development/python-modules/pycryptodome/default.nix
View File

@ -3,7 +3,6 @@
buildPythonPackage rec {
version = "3.4.3";
name = "pycryptodome-${version}";
namePrefix = "";
src = fetchurl {
url = "mirror://pypi/p/pycryptodome/${name}.tar.gz";

4
pkgs/development/python-modules/pytest/default.nix
View File

@ -1,7 +1,7 @@
{ stdenv, buildPythonPackage, fetchurl, isPy26, argparse, hypothesis, py }:
buildPythonPackage rec {
name = "pytest-${version}";
version = "3.0.6";
version = "3.0.7";
preCheck = ''
# don't test bash builtins
@ -10,7 +10,7 @@ buildPythonPackage rec {
src = fetchurl {
url = "mirror://pypi/p/pytest/${name}.tar.gz";
sha256 = "0h6rfp7y7c5mqwfm9fy5fq4l9idnp160c82ylcfjg251y6lk8d34";
sha256 = "b70696ebd1a5e6b627e7e3ac1365a4bc60aaf3495e843c1e70448966c5224cab";
};
buildInputs = [ hypothesis ];

37
pkgs/development/python-modules/qtconsole/default.nix Normal file
View File

@ -0,0 +1,37 @@
{ lib
, buildPythonPackage
, fetchPypi
, nose
, isPy27
, mock
, traitlets
, jupyter_core
, jupyter_client
, pygments
, ipykernel
, pyqt5
}:
buildPythonPackage rec {
pname = "qtconsole";
version = "4.3.0";
name = "${pname}-${version}";
src = fetchPypi {
inherit pname version;
sha256 = "2821ccf85853b83e4958521f82e36325208787eaf79b19b83905a99cc41aa209";
};
buildInputs = [ nose ] ++ lib.optionals isPy27 [mock];
propagatedBuildInputs = [traitlets jupyter_core jupyter_client pygments ipykernel pyqt5];
# : cannot connect to X server
doCheck = false;
meta = {
description = "Jupyter Qt console";
homepage = http://jupyter.org/;
license = lib.licenses.bsd3;
maintainers = with lib.maintainers; [ fridh ];
};
}

33
pkgs/development/python-modules/statsmodels/default.nix Normal file
View File

@ -0,0 +1,33 @@
{ lib
, self
, buildPythonPackage
, fetchPypi
, nose
, numpy
, scipy
, pandas
, patsy
, cython
, matplotlib
}:
buildPythonPackage rec {
pname = "statsmodels";
version = "0.8.0";
name = "${pname}-${version}";
src = fetchPypi {
inherit pname version;
sha256 = "26431ab706fbae896db7870a0892743bfbb9f5c83231644692166a31d2d86048";
};
buildInputs = with self; [ nose ];
propagatedBuildInputs = with self; [numpy scipy pandas patsy cython matplotlib];
meta = {
description = "Statistical computations and models for use with SciPy";
homepage = "https://www.github.com/statsmodels/statsmodels";
license = lib.licenses.bsd3;
maintainers = with lib.maintainers; [ fridh ];
};
}

29
pkgs/development/python-modules/widgetsnbextension/default.nix Normal file
View File

@ -0,0 +1,29 @@
{ lib
, buildPythonPackage
, fetchPypi
, notebook
, ipywidgets
}:
buildPythonPackage rec {
pname = "widgetsnbextension";
name = "${pname}-${version}";
version = "2.0.0";
src = fetchPypi {
inherit pname version;
sha256 = "566582a84642d0c0f78b756a954450a38a8743eeb8dad04b7cab3ca66f455e6f";
};
propagatedBuildInputs = [ notebook ];
# No tests in archive
doCheck = false;
meta = {
description = "IPython HTML widgets for Jupyter";
homepage = http://ipython.org/;
license = ipywidgets.meta.license; # Build from same repo
maintainers = with lib.maintainers; [ fridh ];
};
}

33
pkgs/development/python-modules/xarray/default.nix Normal file
View File

@ -0,0 +1,33 @@
{ lib
, buildPythonPackage
, fetchPypi
, pytest
, numpy
, pandas
, python
}:
buildPythonPackage rec {
pname = "xarray";
version = "0.9.5";
name = "${pname}-${version}";
src = fetchPypi {
inherit pname version;
sha256 = "d23bfcc317829570daa1fe8306ad7ff62cd77847bbd68e3ffc53d847bff7c36d";
};
buildInputs = [ pytest ];
propagatedBuildInputs = [numpy pandas];
checkPhase = ''
py.test $out/${python.sitePackages}
'';
meta = {
description = "N-D labeled arrays and datasets in Python";
homepage = https://github.com/pydata/xarray;
license = lib.licenses.asl20;
maintainers = with lib.maintainers; [ fridh ];
};
}

2
pkgs/os-specific/linux/util-linux/default.nix
View File

@ -20,6 +20,8 @@ stdenv.mkDerivation rec {
postPatch = ''
substituteInPlace include/pathnames.h \
--replace "/bin/login" "${shadow}/bin/login"
substituteInPlace sys-utils/eject.c \
--replace "/bin/umount" "$out/bin/umount"
'';
crossAttrs = {

8
pkgs/stdenv/generic/default.nix
View File

@ -264,18 +264,16 @@ let
__ignoreNulls = true;
# Inputs built by the cross compiler.
buildInputs = if crossConfig != null then buildInputs' else [];
propagatedBuildInputs = if crossConfig != null then propagatedBuildInputs' else [];
buildInputs = buildInputs';
propagatedBuildInputs = propagatedBuildInputs';
# Inputs built by the usual native compiler.
nativeBuildInputs = nativeBuildInputs'
++ lib.optionals (crossConfig == null) buildInputs'
++ lib.optional
(result.isCygwin
|| (crossConfig != null && lib.hasSuffix "mingw32" crossConfig))
../../build-support/setup-hooks/win-dll-link.sh
;
propagatedNativeBuildInputs = propagatedNativeBuildInputs' ++
(if crossConfig == null then propagatedBuildInputs' else []);
propagatedNativeBuildInputs = propagatedNativeBuildInputs';
} // ifDarwin {
# TODO: remove lib.unique once nix has a list canonicalization primitive
__sandboxProfile =

53
pkgs/stdenv/generic/setup.sh
View File

@ -290,15 +290,26 @@ findInputs() {
fi
}
crossPkgs=""
for i in $buildInputs $defaultBuildInputs $propagatedBuildInputs; do
findInputs $i crossPkgs propagated-build-inputs
done
if [ -z "$crossConfig" ]; then
# Not cross-compiling - both buildInputs (and variants like propagatedBuildInputs)
# are handled identically to nativeBuildInputs
nativePkgs=""
for i in $nativeBuildInputs $buildInputs \
$defaultNativeBuildInputs $defaultBuildInputs \
$propagatedNativeBuildInputs $propagatedBuildInputs; do
findInputs $i nativePkgs propagated-native-build-inputs
done
else
crossPkgs=""
for i in $buildInputs $defaultBuildInputs $propagatedBuildInputs; do
findInputs $i crossPkgs propagated-build-inputs
done
nativePkgs=""
for i in $nativeBuildInputs $defaultNativeBuildInputs $propagatedNativeBuildInputs; do
findInputs $i nativePkgs propagated-native-build-inputs
done
nativePkgs=""
for i in $nativeBuildInputs $defaultNativeBuildInputs $propagatedNativeBuildInputs; do
findInputs $i nativePkgs propagated-native-build-inputs
done
fi
# Set the relevant environment variables to point to the build inputs
@ -759,14 +770,26 @@ fixupPhase() {
# Propagate build inputs and setup hook into the development output.
if [ -n "$propagatedBuildInputs" ]; then
mkdir -p "${!outputDev}/nix-support"
echo "$propagatedBuildInputs" > "${!outputDev}/nix-support/propagated-build-inputs"
fi
if [ -z "$crossConfig" ]; then
# Not cross-compiling - propagatedBuildInputs are handled identically to propagatedNativeBuildInputs
local propagated="$propagatedNativeBuildInputs"
if [ -n "$propagatedBuildInputs" ]; then
propagated+="${propagated:+ }$propagatedBuildInputs"
fi
if [ -n "$propagated" ]; then
mkdir -p "${!outputDev}/nix-support"
echo "$propagated" > "${!outputDev}/nix-support/propagated-native-build-inputs"
fi
else
if [ -n "$propagatedBuildInputs" ]; then
mkdir -p "${!outputDev}/nix-support"
echo "$propagatedBuildInputs" > "${!outputDev}/nix-support/propagated-build-inputs"
fi
if [ -n "$propagatedNativeBuildInputs" ]; then
mkdir -p "${!outputDev}/nix-support"
echo "$propagatedNativeBuildInputs" > "${!outputDev}/nix-support/propagated-native-build-inputs"
if [ -n "$propagatedNativeBuildInputs" ]; then
mkdir -p "${!outputDev}/nix-support"
echo "$propagatedNativeBuildInputs" > "${!outputDev}/nix-support/propagated-native-build-inputs"
fi
fi
if [ -n "$setupHook" ]; then

12
pkgs/tools/bluetooth/blueman/default.nix
View File

@ -1,6 +1,6 @@
{ stdenv, lib, fetchurl, intltool, pkgconfig, pythonPackages, bluez, polkit, gtk3
, obex_data_server, xdg_utils, libnotify, dconf, gsettings_desktop_schemas, dnsmasq, dhcp
, hicolor_icon_theme, librsvg
, hicolor_icon_theme, librsvg, wrapGAppsHook
, withPulseAudio ? true, libpulseaudio }:
let
@ -15,7 +15,7 @@ in stdenv.mkDerivation rec {
sha256 = "03s305mbc57nl3sq5ywh9casz926k4aqnylgaidli8bmgz1djbg9";
};
nativeBuildInputs = [ intltool pkgconfig pythonPackages.wrapPython pythonPackages.cython ];
nativeBuildInputs = [ intltool pkgconfig pythonPackages.wrapPython pythonPackages.cython wrapGAppsHook ];
buildInputs = [ bluez gtk3 pythonPackages.python libnotify dconf librsvg
gsettings_desktop_schemas hicolor_icon_theme ]
@ -32,12 +32,8 @@ in stdenv.mkDerivation rec {
configureFlags = [ (lib.enableFeature withPulseAudio "pulseaudio") ];
postFixup = ''
makeWrapperArgs="\
--prefix PATH ':' ${binPath} \
--prefix GI_TYPELIB_PATH : $GI_TYPELIB_PATH \
--prefix XDG_DATA_DIRS : $GSETTINGS_SCHEMAS_PATH \
--prefix GIO_EXTRA_MODULES : ${dconf}/lib/gio/modules"
preFixup = ''
makeWrapperArgs="--prefix PATH ':' ${binPath}"
wrapPythonPrograms
'';

8
pkgs/top-level/all-packages.nix
View File

@ -6010,7 +6010,7 @@ with pkgs;
ocropus = callPackage ../applications/misc/ocropus { };
inherit (callPackages ../development/interpreters/perl {}) perl perl520 perl522;
inherit (callPackages ../development/interpreters/perl {}) perl perl522 perl524;
pachyderm = callPackage ../applications/networking/cluster/pachyderm { };
@ -10950,7 +10950,11 @@ with pkgs;
neo4j = callPackage ../servers/nosql/neo4j { };
net_snmp = callPackage ../servers/monitoring/net-snmp { };
net_snmp = callPackage ../servers/monitoring/net-snmp {
# https://sourceforge.net/p/net-snmp/bugs/2712/
# remove after net-snmp > 5.7.3
perl = perl522;
};
newrelic-sysmond = callPackage ../servers/monitoring/newrelic-sysmond { };

450
pkgs/top-level/python-packages.nix
View File

@ -175,6 +175,8 @@ in {
};
};
asn1crypto = callPackage ../development/python-modules/asn1crypto { };
# packages defined elsewhere
bap = callPackage ../development/python-modules/bap {
@ -4542,25 +4544,39 @@ in {
cryptography = buildPythonPackage rec {
# also bump cryptography_vectors
name = "cryptography-${version}";
version = "1.7.2";
pname = "cryptography";
name = "${pname}${version}";
version = "1.8.1";
src = pkgs.fetchurl {
url = "mirror://pypi/c/cryptography/${name}.tar.gz";
sha256 = "1ad9zmzi31fnz31qfchxcwiydvlxq88xndlgsvzr7m537n5vd347";
src = fetchPypi {
inherit pname version;
sha256 = "323524312bb467565ebca7e50c8ae5e9674e544951d28a2904a50012a8828190";
};
buildInputs = [ pkgs.openssl self.pretend self.cryptography_vectors
self.iso8601 self.pyasn1 self.pytest_29 self.py self.hypothesis self.pytz ]
buildInputs = [ pkgs.openssl self.cryptography_vectors ]
++ optional stdenv.isDarwin pkgs.darwin.apple_sdk.frameworks.Security;
propagatedBuildInputs = with self; [ six idna ipaddress pyasn1 cffi pyasn1-modules pytz ]
++ optional (pythonOlder "3.4") self.enum34;
propagatedBuildInputs = with self; [
idna
asn1crypto
packaging
six
] ++ optional (pythonOlder "3.4") enum34
++ optional (pythonOlder "3.3") ipaddress
++ optional (!isPyPy) cffi;
checkInputs = with self; [
pytest
pretend
iso8601
pytz
hypothesis
];
# The test assumes that if we're on Sierra or higher, that we use `getentropy`, but for binary
# compatibility with pre-Sierra for binary caches, we hide that symbol so the library doesn't
# use it. This boils down to them checking compatibility with `getentropy` in two different places,
# so let's neuter the second test.
patchPhase = ''
postPatch = ''
substituteInPlace ./tests/hazmat/backends/test_openssl.py --replace '"16.0"' '"99.0"'
'';
@ -4571,13 +4587,17 @@ in {
cryptography_vectors = buildPythonPackage rec {
# also bump cryptography
name = "cryptography_vectors-${version}";
version = "1.7.2";
pname = "cryptography_vectors";
name = "${pname}${version}";
version = "1.8.1";
src = pkgs.fetchurl {
url = "mirror://pypi/c/cryptography-vectors/${name}.tar.gz";
sha256 = "1p5cw3dzgcpzmp81qb9860hn9qlcvr4rnf0fy31fbvhxl7lfxr2b";
src = fetchPypi {
inherit pname version;
sha256 = "2fd61facea08800ca98ac923f6d02f48a7ae6648025b29cdeb51987c1532add6";
};
# No tests included
doCheck = false;
};
oslo-vmware = buildPythonPackage rec {
@ -4788,11 +4808,13 @@ in {
idna = buildPythonPackage rec {
name = "idna-2.0";
pname = "idna";
version = "2.5";
name = "${pname}-${version}";
src = pkgs.fetchurl {
url = "mirror://pypi/i/idna/${name}.tar.gz";
sha256 = "0frxgmgi234lr9hylg62j69j4ik5zhg0wz05w5dhyacbjfnrl68n";
src = fetchPypi {
inherit pname version;
sha256 = "3cb5ce08046c4e3a560fc02f138d0ac63e00f8ce5901a56b32ec8b7994082aab";
};
meta = {
@ -4928,6 +4950,9 @@ in {
sha256 = "0r5r7ygz9m6d2bklflbl84cqhjkc2q12xgis8268ygjh30g2q3wk";
};
# No tests in archive
doCheck = false;
meta = {
homepage = https://github.com/alex/pretend;
license = licenses.bsd3;
@ -5637,12 +5662,13 @@ in {
});
dask = buildPythonPackage rec {
name = "dask-${version}";
version = "0.13.0";
pname = "dask";
name = "${pname}-${version}";
version = "0.14.1";
src = pkgs.fetchurl {
url = "mirror://pypi/d/dask/${name}.tar.gz";
sha256 = "1f8r6jj9666cnvx3f8bilcx0017smmlw4i4v2p1nwxshs0k514hs";
src = fetchPypi {
inherit pname version;
sha256 = "46c8ef9aa41a5755f2194b535bff7fdef1343d3993ab294b198caf95155ec94e";
};
buildInputs = with self; [ pytest ];
@ -6120,11 +6146,11 @@ in {
decorator = buildPythonPackage rec {
name = "decorator-${version}";
version = "4.0.10";
version = "4.0.11";
src = pkgs.fetchurl {
url = "mirror://pypi/d/decorator/${name}.tar.gz";
sha256 = "9c6e98edcb33499881b86ede07d9968c81ab7c769e28e9af24075f0a5379f070";
sha256 = "953d6bf082b100f43229cf547f4f97f97e970f5ad645ee7601d55ff87afdfe76";
};
meta = {
@ -6289,16 +6315,14 @@ in {
dill = buildPythonPackage rec {
name = "dill-${version}";
version = "0.2.5";
version = "0.2.6";
src = pkgs.fetchurl {
url = "mirror://pypi/d/dill/${name}.tgz";
sha256 = "431c9d46e190dcdf1397234cf659d66e2e22e33b0474ed6ee2d0b16c9c0ea319";
url = "mirror://pypi/d/dill/${name}.zip";
sha256 = "6c1ccca68be483fa8c66e85a89ffc850206c26373aa77a97b83d8d0994e7f1fd";
};
propagatedBuildInputs = with self; [objgraph];
# failing tests
# TypeError: don't know how to make test from: {'byref': False, 'recurse': False, 'protocol': 3, 'fmode': 0}
doCheck = false;
meta = {
@ -13057,96 +13081,11 @@ in {
};
};
ipykernel = buildPythonPackage rec {
version = "4.5.2";
name = "ipykernel-${version}";
ipykernel = callPackage ../development/python-modules/ipykernel { };
src = pkgs.fetchurl {
url = "mirror://pypi/i/ipykernel/${name}.tar.gz";
sha256 = "5a54f25f0e6c8ee74c362c23f9a95e10e74c6b7f5ef42059c861ff6f26d89462";
};
ipyparallel = callPackage ../development/python-modules/ipyparallel { };
buildInputs = with self; [ nose ] ++ optionals isPy27 [mock];
propagatedBuildInputs = with self; [
ipython
jupyter_client
pexpect
traitlets
tornado
];
# Tests require backends.
# I don't want to add all supported backends as propagatedBuildInputs
doCheck = false;
meta = {
description = "IPython Kernel for Jupyter";
homepage = http://ipython.org/;
license = licenses.bsd3;
maintainers = with maintainers; [ fridh ];
};
};
ipyparallel = buildPythonPackage rec {
version = "6.0.0";
name = "ipyparallel-${version}";
src = pkgs.fetchurl {
url = "mirror://pypi/i/ipyparallel/${name}.tar.gz";
sha256 = "9bb5032e98a8c73ddb3da5fb8eecd93c676a5278b68799ab19257b348a0a27f6";
};
buildInputs = with self; [ nose ];
propagatedBuildInputs = with self; [ dateutil ipython_genutils decorator pyzmq ipython jupyter_client ipykernel tornado
] ++ optionals (!isPy3k) [ futures ];
# Requires access to cluster
doCheck = false;
meta = {
description = "Interactive Parallel Computing with IPython";
homepage = http://ipython.org/;
license = licenses.bsd3;
maintainers = with maintainers; [ fridh ];
};
};
ipython = buildPythonPackage rec {
version = "5.3.0";
name = "ipython-${version}";
src = pkgs.fetchurl {
url = "mirror://pypi/i/ipython/${name}.tar.gz";
sha256 = "bf5e615e7d96dac5a61fbf98d9e2926d98aa55582681bea7e9382992a3f43c1d";
};
prePatch = stdenv.lib.optionalString stdenv.isDarwin ''
substituteInPlace setup.py --replace "'gnureadline'" " "
'';
buildInputs = with self; [ nose pkgs.glibcLocales pygments ] ++ optionals isPy27 [mock];
propagatedBuildInputs = with self;
[ backports_shutil_get_terminal_size decorator pickleshare prompt_toolkit
simplegeneric traitlets requests2 pathlib2 pexpect ]
++ optionals stdenv.isDarwin [appnope];
LC_ALL="en_US.UTF-8";
doCheck = false; # Circular dependency with ipykernel
checkPhase = ''
nosetests
'';
meta = {
description = "IPython: Productive Interactive Computing";
homepage = http://ipython.org/;
license = licenses.bsd3;
maintainers = with maintainers; [ bjornfor jgeerds fridh ];
};
};
ipython = callPackage ../development/python-modules/ipython { };
ipython_genutils = buildPythonPackage rec {
version = "0.2.0";
@ -13173,28 +13112,7 @@ in {
};
ipywidgets = buildPythonPackage rec {
version = "5.2.2";
name = "ipywidgets-${version}";
src = pkgs.fetchurl {
url = "mirror://pypi/i/ipywidgets/${name}.tar.gz";
sha256 = "baf6098f054dd5eacc2934b8ea3bef908b81ca8660d839f1f940255a72c660d2";
};
# Tests are not distributed
doCheck = false;
buildInputs = with self; [ nose pytest ];
propagatedBuildInputs = with self; [ipython ipykernel traitlets notebook widgetsnbextension ];
meta = {
description = "IPython HTML widgets for Jupyter";
homepage = http://ipython.org/;
license = licenses.bsd3;
maintainers = with maintainers; [ fridh ];
};
};
ipywidgets = callPackage ../development/python-modules/ipywidgets { };
ipaddr = buildPythonPackage rec {
name = "ipaddr-2.1.10";
@ -13325,30 +13243,7 @@ in {
jabberbot = callPackage ../development/python-modules/jabberbot.nix {};
jedi = buildPythonPackage (rec {
name = "jedi-0.9.0";
src = pkgs.fetchurl {
url = "mirror://pypi/j/jedi/${name}.tar.gz";
sha256 = "0c8x962ynpx001fdvp07m2q5jk4igkxbj3rmnydavphvlgxijk1v";
};
buildInputs = [ self.pytest ];
checkPhase = ''
py.test test
'';
# 7 failed
doCheck = false;
meta = {
homepage = https://github.com/davidhalter/jedi;
description = "An autocompletion tool for Python that can be used for text editors";
license = licenses.lgpl3Plus;
maintainers = with maintainers; [ garbas ];
};
});
jedi = callPackage ../development/python-modules/jedi { };
jellyfish = buildPythonPackage rec {
version = "0.5.2";
@ -13487,32 +13382,7 @@ in {
inherit (pkgs.jsonnet) name src;
};
jupyter_client = buildPythonPackage rec {
version = "5.0.0";
name = "jupyter_client-${version}";
src = pkgs.fetchurl {
url = "mirror://pypi/j/jupyter_client/${name}.tar.gz";
sha256 = "2766f9c2deb9ae826e65d53a56a36d69b184f63d0dcb7710835273327126bc5b";
};
buildInputs = with self; [ nose ];
propagatedBuildInputs = with self; [traitlets jupyter_core pyzmq dateutil] ++ optional isPyPy py;
checkPhase = ''
nosetests -v
'';
# Circular dependency with ipykernel
doCheck = false;
meta = {
description = "Jupyter protocol implementation and client libraries";
homepage = http://jupyter.org/;
license = licenses.bsd3;
maintainers = with maintainers; [ fridh ];
};
};
jupyter_client = callPackage ../development/python-modules/jupyter_client { };
jupyter_core = buildPythonPackage rec {
version = "4.3.0";
@ -13928,26 +13798,7 @@ in {
};
};
line_profiler = buildPythonPackage rec{
version = "1.0";
name = "line_profiler-${version}";
src = pkgs.fetchurl {
url = "mirror://pypi/l/line_profiler/${name}.tar.gz";
sha256 = "a9e0c9ffa814f1215107c86c890afa8e63bec5a37d951f6f9d3668c1df2b1900";
};
buildInputs = with self; [ cython ];
disabled = isPyPy;
meta = {
description = "Line-by-line profiler";
homepage = https://github.com/rkern/line_profiler;
license = licenses.bsd3;
maintainers = with maintainers; [ fridh ];
};
};
line_profiler = callPackage ../development/python-modules/line_profiler { };
linode = buildPythonPackage rec {
name = "linode-${version}";
@ -14059,7 +13910,7 @@ in {
};
};
llvmlite = callPackage ../development/python-modules/llvmlite {llvm=pkgs.llvm_38;};
llvmlite = callPackage ../development/python-modules/llvmlite {llvm=pkgs.llvm_39;};
lockfile = buildPythonPackage rec {
pname = "lockfile";
@ -14209,17 +14060,19 @@ in {
src = pkgs.file.src;
patchPhase = ''
substituteInPlace python/magic.py --replace "find_library('magic')" "'${pkgs.file}/lib/libmagic.so'"
substituteInPlace python/magic.py --replace "find_library('magic')" "'${pkgs.file}/lib/libmagic.${if stdenv.isDarwin then "dylib" else "so"}'"
'';
buildInputs = with self; [ python pkgs.file ];
buildInputs = with self; [ pkgs.file ];
preConfigure = "cd python";
# No test suite
doCheck = false;
meta = {
description = "A Python wrapper around libmagic";
homepage = http://www.darwinsys.com/file/;
broken = true;
};
};
@ -15154,6 +15007,9 @@ in {
sha256 = "bda6abb8188d9abb429bd17ed15bc7433f77f1b05a78cfff761711ed81daa7a2";
};
# No tests in archive
doCheck = false;
meta = {
homepage = http://github.com/mrocklin/multipledispatch/;
description = "A relatively sane approach to multiple dispatch in Python";
@ -15734,16 +15590,28 @@ in {
};
netaddr = buildPythonPackage rec {
name = "netaddr-0.7.18";
doCheck = !isPy35; # https://github.com/drkjam/netaddr/issues/117
pname = "netaddr";
version = "0.7.19";
name = "${pname}-${version}";
src = pkgs.fetchurl {
url = "mirror://pypi/n/netaddr/${name}.tar.gz";
sha256 = "06dxjlbcicq7q3vqy8agq11ra01kvvd47j4mk6dmghjsyzyckxd1";
src = fetchPypi {
inherit pname version;
sha256 = "38aeec7cdd035081d3a4c306394b19d677623bf76fa0913f6695127c7753aefd";
};
LC_ALL = "en_US.UTF-8";
buildInputs = [ pkgs.glibcLocales ];
buildInputs = with self; [ pkgs.glibcLocales pytest ];
checkPhase = ''
py.test netaddr/tests
'';
patches = [
(pkgs.fetchpatch {
url = https://github.com/drkjam/netaddr/commit/2ab73f10be7069c9412e853d2d0caf29bd624012.patch;
sha256 = "08rn1s3w9424jhandy4j9sksy852ny00088zh15nirw5ajqg1dn7";
})
];
meta = {
homepage = https://github.com/drkjam/netaddr/;
@ -16099,35 +15967,7 @@ in {
buildInputs = with self; [ nose ];
};
notebook = buildPythonPackage rec {
version = "4.4.1";
name = "notebook-${version}";
src = pkgs.fetchurl {
url = "mirror://pypi/n/notebook/${name}.tar.gz";
sha256 = "dfadef2babd7c04c6c257df7d07d7ba587e503dbb4e4c95305f9a95b8d3a9765";
};
LC_ALL = "en_US.UTF-8";
buildInputs = with self; [nose pkgs.glibcLocales] ++ optionals isPy27 [mock];
propagatedBuildInputs = with self; [jinja2 tornado ipython_genutils traitlets jupyter_core jupyter_client nbformat nbconvert ipykernel terminado requests2 pexpect];
checkPhase = ''
nosetests -v
'';
# Certain tests fail due to being in a chroot.
# PermissionError
doCheck = false;
meta = {
description = "The Jupyter HTML notebook is a web-based notebook environment for interactive computing";
homepage = http://jupyter.org/;
license = licenses.bsd3;
maintainers = with maintainers; [ fridh ];
};
};
notebook = callPackage ../development/python-modules/notebook { };
notify = pkgs.stdenv.mkDerivation (rec {
name = "python-notify-0.1.1";
@ -16281,13 +16121,13 @@ in {
# Therefore we create a separate env for it.
scons = pkgs.python27.withPackages(ps: [ pkgs.scons ]);
in buildPythonPackage rec {
version = "0.5.21.3";
version = "0.5.25";
name = "Nuitka-${version}";
# Latest version is not yet on PyPi
src = pkgs.fetchurl {
url = "https://github.com/kayhayen/Nuitka/archive/${version}.tar.gz";
sha256 = "1i2069hxb94q9kkwcbky59fin8hk1vlj90lwgmrdhn1srvig1cq3";
sha256 = "11psz0pyj56adv4b3f47hl8jakvp2mc2c85s092a5rsv1la1a0aa";
};
buildInputs = with self; stdenv.lib.optionals doCheck [ vmprof pyqt4 ];
@ -18206,6 +18046,9 @@ in {
checkPhase = ''
nosetests -v $out/${python.sitePackages}
'';
postPatch = ''
substituteInPlace setup.py --replace "__builtins__.__NUMPY_SETUP__ = False" ""
'';
};
paho-mqtt = buildPythonPackage rec {
@ -19373,10 +19216,10 @@ in {
prompt_toolkit = buildPythonPackage rec {
name = "prompt_toolkit-${version}";
version = "1.0.13";
version = "1.0.14";
src = pkgs.fetchurl {
sha256 = "33d68ca09f76cd73287fde7df5748ffacf26a8238dd61ee81ac50860ea7c6776";
sha256 = "cc66413b1b4b17021675d9f2d15d57e640b06ddfd99bb724c73484126d22622f";
url = "mirror://pypi/p/prompt_toolkit/${name}.tar.gz";
};
checkPhase = ''
@ -22331,28 +22174,7 @@ in {
};
};
qtconsole = buildPythonPackage rec {
version = "4.2.1";
name = "qtconsole-${version}";
src = pkgs.fetchurl {
url = "mirror://pypi/q/qtconsole/${name}.tar.gz";
sha256 = "1vqqx9hdvrg2d336wjyw0vr5b5v97kflkqqvr7ryicr8als7vv15";
};
buildInputs = with self; [ nose ] ++ optionals isPy27 [mock];
propagatedBuildInputs = with self; [traitlets jupyter_core jupyter_client pygments ipykernel pyqt5];
# : cannot connect to X server
doCheck = false;
meta = {
description = "Jupyter Qt console";
homepage = http://jupyter.org/;
license = licenses.bsd3;
maintainers = with maintainers; [ fridh ];
};
};
qtconsole = callPackage ../development/python-modules/qtconsole { };
quantities = buildPythonPackage rec {
name = "quantities-0.10.1";
@ -25130,29 +24952,7 @@ in {
};
};
statsmodels = buildPythonPackage rec {
name = "statsmodels-${version}";
version = "0.6.1";
src = pkgs.fetchurl {
url = "mirror://pypi/s/statsmodels/${name}.tar.gz";
sha256 = "be4e44374aec9e848b73e5a230dee190ac0c4519e1d40f69a5813190b13ec676";
};
buildInputs = with self; [ nose ];
propagatedBuildInputs = with self; [numpy scipy pandas patsy cython matplotlib];
meta = {
description = "Statistical computations and models for use with SciPy";
homepage = "https://www.github.com/statsmodels/statsmodels";
license = licenses.bsd3;
maintainers = with maintainers; [ fridh ];
};
# Many tests fail when using latest numpy and pandas.
# See also https://github.com/statsmodels/statsmodels/issues/2602
doCheck = false;
};
statsmodels = callPackage ../development/python-modules/statsmodels { };
python_statsd = buildPythonPackage rec {
name = "python-statsd-${version}";
@ -27183,27 +26983,7 @@ EOF
};
};
widgetsnbextension = buildPythonPackage rec {
name = "widgetsnbextension-${version}";
version = "1.2.6";
src = pkgs.fetchurl {
url = "mirror://pypi/w/widgetsnbextension/${name}.tar.gz";
sha256 = "c618cfb32978c9517caf0b4ef3aec312f8dd138577745e7b0d4abfcc7315ce51";
};
propagatedBuildInputs = with self; [ notebook ];
# No tests in archive
doCheck = false;
meta = {
description = "IPython HTML widgets for Jupyter";
homepage = http://ipython.org/;
license = self.ipywidgets.meta.license; # Build from same repo
maintainers = with maintainers; [ fridh ];
};
};
widgetsnbextension = callPackage ../development/python-modules/widgetsnbextension { };
willie = buildPythonPackage rec {
name = "willie-${version}";
@ -27345,29 +27125,7 @@ EOF
};
});
xarray = buildPythonPackage rec {
name = "xarray-${version}";
version = "0.9.1";
src = pkgs.fetchurl {
url = "mirror://pypi/x/xarray/${name}.tar.gz";
sha256 = "89772ed0e23f0e71c3fb8323746374999ecbe79c113e3fadc7ae6374e6dc0525";
};
buildInputs = with self; [ pytest ];
propagatedBuildInputs = with self; [numpy pandas];
checkPhase = ''
py.test $out/${python.sitePackages}
'';
meta = {
description = "N-D labeled arrays and datasets in Python";
homepage = https://github.com/pydata/xarray;
license = licenses.asl20;
maintainers = with maintainers; [ fridh ];
};
};
xarray = callPackage ../development/python-modules/xarray { };
xlwt = callPackage ../development/python-modules/xlwt { };
@ -32002,6 +31760,10 @@ EOF
license = [ licenses.bsd2 licenses.asl20 ];
maintainers = with maintainers; [ bennofs ];
};
checkPhase = ''
py.test
'';
};
pypandoc = buildPythonPackage rec {