diff --git a/pkgs/applications/science/chemistry/octopus/default.nix b/pkgs/applications/science/chemistry/octopus/default.nix new file mode 100644 index 000000000000..2ff20fef40e8 --- /dev/null +++ b/pkgs/applications/science/chemistry/octopus/default.nix @@ -0,0 +1,47 @@ +{ stdenv, fetchurl, symlinkJoin, gfortran, perl, procps +, libyaml, libxc, fftw, openblas, gsl +}: + +let + version = "7.2"; + fftwAll = symlinkJoin { name ="ftw-dev-out"; paths = [ fftw.dev fftw.out ]; }; + +in stdenv.mkDerivation { + name = "octopus-${version}"; + + src = fetchurl { + url = "http://www.tddft.org/programs/octopus/down.php?file=${version}/octopus-${version}.tar.gz"; + sha256 = "03zzmq72zdnjkhifbmlxs7ig7x6sf6mv8zv9mxhakm9hzwa9yn7m"; + }; + + nativeBuildInputs = [ perl procps fftw.dev ]; + buildInputs = [ libyaml gfortran libxc openblas gsl fftw.out ]; + + configureFlags = '' + --with-yaml-prefix=${libyaml} + --with-blas=-lopenblas + --with-lapack=-lopenblas + --with-fftw-prefix=${fftwAll} + --with-gsl-prefix=${gsl} + --with-libxc-prefix=${libxc} + ''; + + doCheck = false; + checkTarget = "check-short"; + + postPatch = '' + patchShebangs ./ + ''; + + postConfigure = '' + patchShebangs testsuite/oct-run_testsuite.sh + ''; + + meta = with stdenv.lib; { + description = "Real-space time dependent density-functional theory code"; + homepage = http://octopus-code.org; + maintainers = with maintainers; [ markuskowa ]; + license = licenses.gpl2; + platforms = [ "x86_64-linux" ]; + }; +} diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index 8db63bcd3c7d..3291134725ec 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -6827,6 +6827,8 @@ with pkgs; ocropus = callPackage ../applications/misc/ocropus { }; + octopus = callPackage ../applications/science/chemistry/octopus { openblas=openblasCompat; }; + inherit (callPackages ../development/interpreters/perl {}) perl perl522 perl524 perl526; pachyderm = callPackage ../applications/networking/cluster/pachyderm { };