Merge pull request #108799 from SuperSandro2000/fix-collection

pkgs/applications/misc/dockbarx/default.nix

@@ -28,6 +28,9 @@ pythonPackages.buildPythonApplication rec {
     ++ (with gnome2; [ gnome_python gnome_python_desktop ])
     ++ [ keybinder ];
 
+    # no tests
+    doCheck = false;
+
   meta = with stdenv.lib; {
     homepage = "https://launchpad.net/dockbar/";
     description = "Lightweight taskbar / panel replacement for Linux which works as a stand-alone dock";

pkgs/applications/misc/raiseorlaunch/default.nix

@@ -10,9 +10,12 @@ python3Packages.buildPythonApplication rec {
   };
 
   nativeBuildInputs = [ python3Packages.setuptools_scm ];
-  checkInputs = [ python3Packages.pytest ];
   pythonPath = with python3Packages; [ i3ipc ];
 
+  # no tests
+  doCheck = false;
+  pythonImportsCheck = [ "raiseorlaunch" ];
+
   meta = with lib; {
     maintainers = with maintainers; [ winpat ];
     description = "A run-or-raise-application-launcher for i3 window manager";

pkgs/applications/misc/remarkable/remarkable-mouse/default.nix

@@ -11,6 +11,10 @@ buildPythonApplication rec {
 
   propagatedBuildInputs = with python3Packages; [ screeninfo paramiko pynput libevdev ];
 
+  # no tests
+  doCheck = false;
+  pythonImportsCheck = [ "remarkable_mouse" ];
+
   meta = with stdenv.lib; {
     description = "A program to use a reMarkable as a graphics tablet";
     homepage = "https://github.com/evidlo/remarkable_mouse";

pkgs/applications/window-managers/i3/altlayout.nix

@@ -11,6 +11,10 @@ python3Packages.buildPythonApplication rec {
 
   pythonPath = with python3Packages; [ enum-compat i3ipc docopt ];
 
+  doCheck = false;
+
+  pythonImportsCheck = [ "i3altlayout" ];
+
   meta = with lib; {
     maintainers = with maintainers; [ magnetophon ];
     description = "Helps you handle more efficiently your screen real estate in i3wm by auto-splitting windows on their longest side";

pkgs/development/libraries/libgda/default.nix

@@ -1,5 +1,5 @@
-{ stdenv, fetchurl, pkgconfig, intltool, itstool, libxml2, gtk3, openssl, gnome3, gobject-introspection, vala, libgee
-, overrideCC, gcc6
+{ stdenv, fetchurl, pkg-config, intltool, itstool, libxml2, gtk3, openssl, gnome3, gobject-introspection, vala, libgee
+, overrideCC, gcc6, fetchpatch, autoreconfHook, gtk-doc, autoconf-archive, yelp-tools
 , mysqlSupport ? false, libmysqlclient ? null
 , postgresSupport ? false, postgresql ? null
 }:
@@ -15,8 +15,16 @@ assert postgresSupport -> postgresql != null;
     url = "mirror://gnome/sources/${pname}/${stdenv.lib.versions.majorMinor version}/${pname}-${version}.tar.xz";
     sha256 = "1j1l4dwjgw6w4d1v4bl5a4kwyj7bcih8mj700ywm7xakh1xxyv3g";
   };
+
+  patches = [
+    # fix compile error with mysql
+    (fetchpatch {
+      url = "https://gitlab.gnome.org/GNOME/libgda/-/commit/9859479884fad5f39e6c37e8995e57c28b11b1b9.diff";
+      sha256 = "158sncc5bg9lkri1wb0i1ri1nhx4c34rzi47gbfkwphlp7qd4qqv";
+    })
+  ];
+
   configureFlags = with stdenv.lib; [
-    "--enable-gi-system-install=no"
     "--with-mysql=${if mysqlSupport then "yes" else "no"}"
     "--with-postgres=${if postgresSupport then "yes" else "no"}"
 
@@ -32,7 +40,7 @@ assert postgresSupport -> postgresql != null;
 
   hardeningDisable = [ "format" ];
 
-  nativeBuildInputs = [ pkgconfig intltool itstool libxml2 gobject-introspection vala ];
+  nativeBuildInputs = [ pkg-config intltool itstool libxml2 gobject-introspection vala autoreconfHook gtk-doc autoconf-archive yelp-tools ];
   buildInputs = with stdenv.lib; [ gtk3 openssl libgee ]
     ++ optional (mysqlSupport) libmysqlclient
     ++ optional (postgresSupport) postgresql;

pkgs/development/python-modules/asyncio-dgram/default.nix

@@ -1,4 +1,5 @@
-{ lib
+{ stdenv
+, lib
 , buildPythonPackage
 , fetchFromGitHub
 , pytestCheckHook
@@ -16,9 +17,12 @@ buildPythonPackage rec {
     sha256 = "1zkmjvq47zw2fsbnzhr5mh9rsazx0z1f8m528ash25jrxsza5crm";
   };
 
+  # OSError: AF_UNIX path too long
+  doCheck = !stdenv.isDarwin;
+
   checkInputs = [
     pytestCheckHook
-    pytest-asyncio  
+    pytest-asyncio
   ];
 
   disabledTests = [ "test_protocol_pause_resume" ];

pkgs/development/python-modules/clifford/default.nix

@@ -22,12 +22,15 @@ buildPythonPackage rec {
     inherit pname version;
     sha256 = "ade11b20d0631dfc9c2f18ce0149f1e61e4baf114108b27cfd68e5c1619ecc0c";
   };
-  patches = [ (fetchpatch {
-    # Compatibility with h5py 3.
-    # Will be included in the next releasse after 1.3.1
-    url = "https://github.com/pygae/clifford/pull/388/commits/955d141662c68d3d61aa50a162b39e656684c208.patch";
-    sha256 = "00m8ias58xycn5n78sy9wywf4wck1v0gb8gzmg40inzdiha93jyz";
-  }) ];
+
+  patches = [
+    (fetchpatch {
+      # Compatibility with h5py 3.
+      # Will be included in the next releasse after 1.3.1
+      url = "https://github.com/pygae/clifford/pull/388/commits/955d141662c68d3d61aa50a162b39e656684c208.patch";
+      sha256 = "0pkpwnk0kfdxsbzsxqlqh8kgif17l5has0mg31g3kyp8lncj89b1";
+    })
+  ];
 
   propagatedBuildInputs = [
     future
@@ -53,10 +56,11 @@ buildPythonPackage rec {
     cd clifford/test
   '';
 
-  pytestFlagsArray = [
-    "-m \"not veryslow\""
-    "--ignore=test_algebra_initialisation.py" # fails without JIT
-    "--ignore=test_cga.py"
+  disabledTests = [
+    "veryslow"
+    "test_algebra_initialisation"
+    "test_cga"
+    "test_estimate_rotor_sequential[random_sphere]"
   ];
 
   meta = with lib; {

pkgs/development/python-modules/nixpkgs/default.nix

@@ -19,6 +19,10 @@ buildPythonPackage rec {
   buildInputs = [ pbr ];
   propagatedBuildInputs = [ pythonix ];
 
+  # does not have any tests
+  doCheck = false;
+  pythonImportsCheck = [ "nixpkgs" ];
+
   meta = with stdenv.lib; {
     description = "Allows to `from nixpkgs import` stuff in interactive Python sessions";
     homepage = "https://github.com/t184256/nixpkgs-python-importer";

pkgs/development/python-modules/python-engineio/default.nix

@@ -36,6 +36,8 @@ buildPythonPackage rec {
     pytestCheckHook
   ];
 
+  doCheck = !stdenv.isDarwin;
+
   preCheck = stdenv.lib.optionalString stdenv.isLinux ''
     echo "nameserver 127.0.0.1" > resolv.conf
     export NIX_REDIRECTS=/etc/protocols=${iana-etc}/etc/protocols:/etc/resolv.conf=$(realpath resolv.conf) \

pkgs/development/python-modules/shiboken2/default.nix

@@ -1,5 +1,5 @@
-{ buildPythonPackage, python, fetchurl, stdenv, pyside2,
-  cmake, qt5, llvmPackages }:
+{ buildPythonPackage, python, fetchurl, stdenv, pyside2
+, cmake, qt5, llvmPackages }:
 
 stdenv.mkDerivation {
   pname = "shiboken2";
@@ -32,5 +32,6 @@ stdenv.mkDerivation {
     license = with licenses; [ gpl2 lgpl21 ];
     homepage = "https://wiki.qt.io/Qt_for_Python";
     maintainers = with maintainers; [ gebner ];
+    broken = stdenv.isDarwin;
   };
 }

pkgs/games/anki/default.nix

@@ -128,6 +128,9 @@ buildPythonApplication rec {
   # UTF-8 locale needed for testing
   LC_ALL = "en_US.UTF-8";
 
+  # tests fail with to many open files
+  doCheck = !stdenv.isDarwin;
+
   # - Anki writes some files to $HOME during tests
   # - Skip tests using network
   checkPhase = ''

pkgs/tools/networking/urlwatch/default.nix

@@ -1,7 +1,7 @@
 { stdenv, fetchFromGitHub, python3Packages }:
 
 python3Packages.buildPythonApplication rec {
-  name = "urlwatch-${version}";
+  pname = "urlwatch";
   version = "2.21";
 
   src = fetchFromGitHub {
@@ -23,6 +23,9 @@ python3Packages.buildPythonApplication rec {
     pyppeteer
   ];
 
+  # no tests
+  doCheck = false;
+
   meta = with stdenv.lib; {
     description = "A tool for monitoring webpages for updates";
     homepage = "https://thp.io/2008/urlwatch/";

pkgs/top-level/all-packages.nix

@@ -16697,6 +16697,7 @@ in
   vte_290 = callPackage ../development/libraries/vte/2.90.nix { };
 
   vtk_7 = libsForQt515.callPackage ../development/libraries/vtk/7.x.nix {
+    stdenv = gcc9Stdenv;
     inherit (darwin) libobjc;
     inherit (darwin.apple_sdk.libs) xpc;
     inherit (darwin.apple_sdk.frameworks) Cocoa CoreServices DiskArbitration
@@ -16704,6 +16705,7 @@ in
                                           CoreText IOSurface ImageIO OpenGL GLUT;
   };
   vtk_8 = libsForQt515.callPackage ../development/libraries/vtk/8.x.nix {
+    stdenv = gcc9Stdenv;
     inherit (darwin) libobjc;
     inherit (darwin.apple_sdk.libs) xpc;
     inherit (darwin.apple_sdk.frameworks) Cocoa CoreServices DiskArbitration