Peter Simons
d16c38a260
R: update to version 3.4.0
...
The new version needs TZ configured to a value other than "UTC" for the test
suite to succeed. Otherwise, an assumption in "reg-tests-1d.R" won't hold that
expects
d <- as.POSIXlt("2016-12-06"); d$zone <- 1; format(d)
to throw an error about an invalid time zone.
2017-04-24 15:39:08 +02:00
Nikolay Amiantov
13162b9ddb
fritzing: 0.9.0b -> 0.9.3b
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Fixes #24943 .
2017-04-23 17:53:11 +03:00
Vladimír Čunát
9fc61d0db5
simgrid: fixup sandboxed build after update #24915
2017-04-16 14:15:32 +02:00
Sophia Gold
76b8ce3023
simgrid: 3.11.1 -> 3.15
2017-04-15 08:22:02 +02:00
Matthias Beyer
6239da6ade
diamond: init at 0.8.36
2017-04-12 13:05:57 +02:00
Justin Bedő
c5015b77af
platypus: fix platforms metadata ( #24666 )
2017-04-06 10:10:54 +01:00
Maximilian Bosch
1e295260e2
geogebra: 5-0-346-0 -> 5-0-350-0
2017-03-30 21:55:05 +02:00
Robin Gloster
b9948fedc6
ncbi_tools: mark as broken and remove -fPIC
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PIC is used by default since 16.09
2017-03-30 16:23:34 +02:00
Robin Gloster
13ab07d95a
maxima-ecl: mark as broken
2017-03-30 16:23:34 +02:00
Robin Gloster
536b782450
libsingular: does not build on i686
2017-03-30 16:23:34 +02:00
Joachim F
e15b666f79
Merge pull request #24416 from Twey/redprl-2017-03-28
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redprl: 2016-09-22 -> 2017-03-28
2017-03-30 14:02:10 +01:00
Robin Gloster
f87de53883
sage: mark as broken
2017-03-30 12:06:08 +02:00
James ‘Twey’ Kay
c54588d250
redprl: 2016-09-22 -> 2017-03-28
2017-03-28 21:02:30 +01:00
Vladimír Čunát
96d41e393d
treewide: purge maintainers.urkud
...
It's sad, but he's been inactive for the last five years.
Keeping such people in meta.maintainers is counter-productive.
2017-03-27 19:52:29 +02:00
Thomas Tuegel
299c842df2
qgroundcontrol: broken on Qt 5.6
2017-03-25 08:49:39 -05:00
Maximilian Bosch
9787b2b808
geogebra: 5-0-338-0 -> 5-0-346-0
2017-03-24 22:16:57 +01:00
Peter Hoeg
317734f99c
speedcrunch: stick to qt 5.7 as 5.8 is broken
2017-03-25 00:39:30 +08:00
Michael Raskin
47183c813e
golly-beta: init at 2.9b2 to test GL issues
2017-03-22 17:02:55 +01:00
Franz Pletz
bfb7890fa0
Merge pull request #24191 from jbedo/bedtools
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bedtools: fix clang build
2017-03-22 15:30:19 +01:00
Justin Bedo
56aeb271c9
bedtools: fix clang build
2017-03-22 12:00:24 +11:00
Dan Peebles
7ad3fd7ca7
neuron: fix on clang 3.8 and above
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This is in preparation for upgrading Darwin stdenv to LLVM 4
2017-03-21 01:00:18 -04:00
Michael Raskin
4d5f33deff
Merge pull request #23376 from bcdarwin/ants
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ANTs: init at 2.1.0 (0gyys1lf) and update ITK accordingly
2017-03-18 18:42:24 +01:00
Robin Gloster
f70a896094
hol: mark as broken
2017-03-14 15:36:06 +01:00
Arseniy Seroka
320a8a5a94
Merge pull request #23842 from volhovM/fix/sage_68_sed
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sage: fix build at 6.8
2017-03-13 16:51:55 +03:00
Robin Gloster
e2a13af49c
emboss: fix build
2017-03-13 13:15:51 +01:00
Mikhail Volkhov
78c0cecc5f
sage: fix build at 6.8
2017-03-13 10:34:55 +03:00
Maximilian Bosch
2df3b5ca7f
geogebra: 5-0-331-0 -> 5-0-338-0 ( #23593 )
2017-03-12 21:37:10 +00:00
Jörg Thalheim
4d13b5d201
Merge pull request #23631 from edef1c/verilator-shebang
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verilator: fix Perl shebangs
2017-03-09 15:05:40 +01:00
Justin Bedo
1ac797861b
SnpEff: init at 4.3i
2017-03-08 22:43:50 +01:00
Justin Bedo
076e513b94
varscan: init at 2.4.2
2017-03-08 22:43:49 +01:00
Justin Bedo
4bb50fd08c
picard-tools: init at 2.7.1
2017-03-08 22:43:45 +01:00
Justin Bedo
7f214e6410
bedtools: init at 2.26.0
2017-03-08 22:36:29 +01:00
Justin Bedo
661048c803
platypus: init at 2017-03-07
2017-03-08 22:36:03 +01:00
Ricardo Ardissone
e17d3d4ef1
gplates: use boost 160
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update 161 changed reference parameters for optional
https://hydra.nixos.org/build/49707856/nixlog/1
http://www.boost.org/doc/libs/1_61_0/libs/optional/doc/html/boost_ooptional/relnotes.html
2017-03-08 13:04:34 +02:00
edef
2c02c84cdc
verilator: fix Perl shebangs
2017-03-08 11:38:48 +01:00
Peter Simons
c5563b48ba
R: set TZDIR properly to fix test suite
2017-03-07 14:56:46 +01:00
Peter Simons
6b3eec627e
R: include output of sessionInfo() in the "make check" log
...
The R developers would like that information to be included in bug
reports.
2017-03-07 14:56:46 +01:00
Peter Simons
fac139e723
R: update to version 3.3.3
2017-03-07 14:56:46 +01:00
Jörg Thalheim
99e74e9509
alliance: mark as broken
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there is no maintainer for this package and even debian looks
for a new maintainer.
2017-03-06 08:27:10 +01:00
Thomas Tuegel
494dc2af2e
Merge pull request #23423 from ttuegel/fricas
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fricas: 1.2.2 -> 1.3.1
2017-03-03 09:49:47 -06:00
Robin Gloster
bb9a37a2a5
ikarus: remove
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unmaintained, only works on 32 bit
2017-03-03 13:43:04 +01:00
Benno Fünfstück
253d736398
boinc: fix location of /etc in $out
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Looks like the latest version no longer requires the patch, and the patch instead resulted in
/etc files being installed to `$out/$out/etc` instead of `$out/etc`
2017-03-03 12:58:43 +01:00
Thomas Tuegel
28cb067600
fricas: 1.2.2 -> 1.3.1
2017-03-02 19:39:55 -06:00
Robin Gloster
c1866cade9
libsForQt5.qmltermwidget: fix build
2017-03-02 14:13:35 +01:00
Ben Darwin
05359c327b
ANTs: init at 2.1.0 (0gyys1lf)
2017-03-01 21:06:30 -05:00
Katona László
085502dd80
cytoscape: fixed issue with startup script
2017-03-01 21:46:49 +01:00
Robin Gloster
4df663a9a2
verilator: 3.884 -> 3.900
2017-02-27 15:22:50 +01:00
Domen Kožar
4ccb553b70
Merge pull request #22817 from jbedo/r
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R: 3.2.4 -> 3.3.2
2017-02-27 14:02:13 +01:00
Bjørn Forsman
c49533a494
qt-gstreamer1: align attrname with pkgname
2017-02-27 12:16:26 +01:00
Christopher League
242f6caac6
logisim: use better jar wrapper, closes #23068
2017-02-26 10:19:32 +01:00
