mirror of
https://github.com/ilyakooo0/nixpkgs.git
synced 2024-11-19 02:44:17 +03:00
33afbf39f6
checkInputs used to be added to nativeBuildInputs. Now we have nativeCheckInputs to do that instead. Doing this treewide change allows to keep hashes identical to before the introduction of nativeCheckInputs.
88 lines
2.1 KiB
Nix
88 lines
2.1 KiB
Nix
{ lib
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, python
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, buildPythonPackage
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, fetchFromGitHub
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, cython
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, pybind11
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, tiledb
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, numpy
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, wheel
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, isPy3k
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, setuptools-scm
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, psutil
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, pandas
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}:
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buildPythonPackage rec {
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pname = "tiledb";
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version = "0.19.0";
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format = "setuptools";
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src = fetchFromGitHub {
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owner = "TileDB-Inc";
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repo = "TileDB-Py";
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rev = "refs/tags/${version}";
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sha256 = "sha256-eha0I/SJmBGFdvJrNUBg/sx54UXdbjhEbyvI40Vngm4=";
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};
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nativeBuildInputs = [
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cython
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pybind11
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setuptools-scm
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];
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buildInputs = [
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tiledb
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];
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propagatedBuildInputs = [
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numpy
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wheel # No idea why but it is listed
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];
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nativeCheckInputs = [
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psutil
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# optional
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pandas
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];
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TILEDB_PATH = tiledb;
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SETUPTOOLS_SCM_PRETEND_VERSION = version;
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disabled = !isPy3k; # Not bothering with python2 anymore
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postPatch = ''
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# Hardcode path to shared object
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substituteInPlace tiledb/__init__.py --replace \
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'os.path.join(lib_dir, lib_name)' 'os.path.join("${tiledb}/lib", lib_name)'
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# Disable failing test
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substituteInPlace tiledb/tests/test_examples.py --replace \
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"test_docs" "dont_test_docs"
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# these tests don't always fail
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substituteInPlace tiledb/tests/test_libtiledb.py --replace \
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"test_varlen_write_int_subarray" "dont_test_varlen_write_int_subarray" \
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--replace "test_memory_cleanup" "dont_test_memory_cleanup" \
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--replace "test_ctx_thread_cleanup" "dont_test_ctx_thread_cleanup"
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substituteInPlace tiledb/tests/test_metadata.py --replace \
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"test_metadata_consecutive" "dont_test_metadata_consecutive"
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'';
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checkPhase = ''
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pushd "$TMPDIR"
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${python.interpreter} -m unittest tiledb.tests.all.suite_test
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popd
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'';
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pythonImportsCheck = [ "tiledb" ];
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meta = with lib; {
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description = "Python interface to the TileDB storage manager";
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homepage = "https://github.com/TileDB-Inc/TileDB-Py";
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license = licenses.mit;
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maintainers = with maintainers; [ fridh ];
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# tiledb/core.cc:556:30: error: ‘struct std::array<long unsigned int, 2>’ has no member named ‘second’
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broken = true;
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};
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}
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