mirror of
https://github.com/ilyakooo0/nixpkgs.git
synced 2024-10-14 00:22:44 +03:00
eac28f38d6
Arg to lib.optional is a list build time tool in buildInputs *Flags not a list https://github.com/nix-community/nixpkgs-lint
61 lines
1.6 KiB
Nix
61 lines
1.6 KiB
Nix
{ lib
|
|
, stdenv
|
|
, fetchurl
|
|
, python3
|
|
, perl
|
|
, blast
|
|
, autoPatchelfHook
|
|
, zlib
|
|
, bzip2
|
|
, glib
|
|
, libxml2
|
|
, coreutils
|
|
}:
|
|
let
|
|
pname = "blast-bin";
|
|
version = "2.13.0";
|
|
|
|
srcs = rec {
|
|
x86_64-linux = fetchurl {
|
|
url = "https://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/${version}/ncbi-blast-${version}+-x64-linux.tar.gz";
|
|
hash = "sha256-QPK3OdT++GoNI1NHyEpu2/hB2hqHYPQ/vNXFAVCwVEc=";
|
|
};
|
|
aarch64-linux = fetchurl {
|
|
url = "https://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/${version}/ncbi-blast-${version}+-x64-arm-linux.tar.gz";
|
|
hash = "sha256-vY8K66k7KunpBUjFsJTTb+ur5n1XmU0/mYxhZsi9ycs=";
|
|
};
|
|
x86_64-darwin = fetchurl {
|
|
url = "https://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/${version}/ncbi-blast-${version}+-x64-macosx.tar.gz";
|
|
hash = "sha256-Y0JlOUl9Ego6LTxTCNny3P5c1H3fApPXQm7Z6Zhq9RA=";
|
|
};
|
|
aarch64-darwin = x86_64-darwin;
|
|
};
|
|
src = srcs.${stdenv.hostPlatform.system};
|
|
in
|
|
stdenv.mkDerivation {
|
|
inherit pname version src;
|
|
|
|
nativeBuildInputs = lib.optionals stdenv.isLinux [ autoPatchelfHook ];
|
|
|
|
buildInputs = [ python3 perl ] ++ lib.optionals stdenv.isLinux [ zlib bzip2 glib libxml2 ];
|
|
|
|
installPhase = ''
|
|
runHook preInstall
|
|
|
|
install -Dm755 bin/* -t $out/bin
|
|
|
|
runHook postInstall
|
|
'';
|
|
|
|
preFixup = ''
|
|
substituteInPlace $out/bin/get_species_taxids.sh \
|
|
--replace /bin/rm ${coreutils}/bin/rm
|
|
'';
|
|
|
|
meta = with lib; {
|
|
inherit (blast.meta) description homepage license;
|
|
platforms = [ "x86_64-linux" "aarch64-linux" "x86_64-darwin" "aarch64-darwin" ];
|
|
maintainers = with maintainers; [ natsukium ];
|
|
};
|
|
}
|