diff --git a/README.md b/README.md
index a1971502..874c3258 100644
--- a/README.md
+++ b/README.md
@@ -33,6 +33,15 @@ The CPU-only version will automatically be compiled if CUDA cannot be detected b
  * CMake 3.5.1
  * The CPU version should be a lot more forgiving concerning GCC/G++ or Boost versions.
 
+## Git repository set-up (branch marian-integration only)
+Branch _marian-integration_ now contains marian as a sub-module. 
+
+After the initial clone or checkout of this branch, run the following command
+```bash
+git submodule update --init --recursive
+```
+If you want git to always update the submodules at git checkout, git pull, git merge, etc. (it won't by default, wich often causes confusion), copy the script ```git-hooks/post-rewrite``` into ```./git/hooks``` and make it executable.
+
 ## Compilation
 The project is a standard Cmake out-of-source build:
 
diff --git a/marian b/marian
index 097a40a8..9fc7df15 160000
--- a/marian
+++ b/marian
@@ -1 +1 @@
-Subproject commit 097a40a8404f6061545c76db846e1d6bf1c35ed3
+Subproject commit 9fc7df1576bc869a6dc6a5e795e71bbec77cb29a