mirror of
https://github.com/neilotoole/sq.git
synced 2024-12-20 22:51:35 +03:00
261 lines
5.7 KiB
Go
261 lines
5.7 KiB
Go
package csv
|
|
|
|
import (
|
|
"context"
|
|
"encoding/csv"
|
|
"errors"
|
|
"io"
|
|
"unicode/utf8"
|
|
|
|
"github.com/neilotoole/sq/libsq/core/kind"
|
|
"github.com/neilotoole/sq/libsq/core/sqlz"
|
|
|
|
"github.com/neilotoole/sq/libsq/core/stringz"
|
|
|
|
"github.com/neilotoole/sq/libsq/core/lg/lga"
|
|
|
|
"github.com/neilotoole/sq/libsq/core/lg/lgm"
|
|
|
|
"github.com/neilotoole/sq/libsq/core/lg"
|
|
|
|
"github.com/neilotoole/sq/libsq"
|
|
"github.com/neilotoole/sq/libsq/core/errz"
|
|
"github.com/neilotoole/sq/libsq/core/options"
|
|
"github.com/neilotoole/sq/libsq/driver"
|
|
"github.com/neilotoole/sq/libsq/source"
|
|
)
|
|
|
|
// emptyAsNull determines if an empty CSV field is treated as NULL
|
|
// or as the zero value for the kind of that field.
|
|
//
|
|
// TODO: emptyAsNull should come from config.
|
|
const emptyAsNull = true
|
|
|
|
// importCSV loads the src CSV data into scratchDB.
|
|
func importCSV(ctx context.Context, src *source.Source, openFn source.FileOpenFunc, scratchDB driver.Database) error {
|
|
log := lg.FromContext(ctx)
|
|
|
|
var err error
|
|
var r io.ReadCloser
|
|
|
|
r, err = openFn()
|
|
if err != nil {
|
|
return err
|
|
}
|
|
defer lg.WarnIfCloseError(log, lgm.CloseFileReader, r)
|
|
|
|
delim, err := getDelimiter(src)
|
|
if err != nil {
|
|
return err
|
|
}
|
|
|
|
cr := newCSVReader(r, delim)
|
|
recs, err := readRecords(cr, driver.Tuning.SampleSize)
|
|
if err != nil {
|
|
return err
|
|
}
|
|
|
|
headerPresent, err := hasHeaderRow(recs, src.Options)
|
|
if err != nil {
|
|
return err
|
|
}
|
|
|
|
var header []string
|
|
if headerPresent {
|
|
header = recs[0]
|
|
|
|
// We're done with the first row
|
|
recs = recs[1:]
|
|
} else {
|
|
// The CSV file does not have a header record. We will generate
|
|
// col names [A,B,C...].
|
|
header = make([]string, len(recs[0]))
|
|
for i := range recs[0] {
|
|
header[i] = stringz.GenerateAlphaColName(i, false)
|
|
}
|
|
}
|
|
|
|
kinds, mungers, err := detectColKinds(recs)
|
|
if err != nil {
|
|
return err
|
|
}
|
|
|
|
// And now we need to create the dest table in scratchDB
|
|
tblDef := createTblDef(source.MonotableName, header, kinds)
|
|
|
|
err = scratchDB.SQLDriver().CreateTable(ctx, scratchDB.DB(), tblDef)
|
|
if err != nil {
|
|
return errz.Wrap(err, "csv: failed to create dest scratch table")
|
|
}
|
|
|
|
recMeta, err := getRecMeta(ctx, scratchDB, tblDef)
|
|
if err != nil {
|
|
return err
|
|
}
|
|
|
|
if emptyAsNull {
|
|
configureEmptyNullMunge(mungers, recMeta)
|
|
}
|
|
|
|
insertWriter := libsq.NewDBWriter(log, scratchDB, tblDef.Name, driver.Tuning.RecordChSize)
|
|
err = execInsert(ctx, insertWriter, recMeta, mungers, recs, cr)
|
|
if err != nil {
|
|
return err
|
|
}
|
|
|
|
inserted, err := insertWriter.Wait()
|
|
if err != nil {
|
|
return err
|
|
}
|
|
|
|
log.Debug("Inserted rows",
|
|
lga.Count, inserted,
|
|
lga.Target, source.Target(scratchDB.Source(), tblDef.Name),
|
|
)
|
|
return nil
|
|
}
|
|
|
|
// configureEmptyNullMunge configures mungers to that empty string is
|
|
// munged to nil.
|
|
func configureEmptyNullMunge(mungers []kind.MungeFunc, recMeta sqlz.RecordMeta) {
|
|
kinds := recMeta.Kinds()
|
|
for i := range mungers {
|
|
if kinds[i] == kind.Text {
|
|
if mungers[i] == nil {
|
|
mungers[i] = kind.MungeEmptyStringAsNil
|
|
continue
|
|
}
|
|
|
|
// There's already a munger: wrap it
|
|
existing := mungers[i]
|
|
mungers[i] = func(v any) (any, error) {
|
|
var err error
|
|
v, err = existing(v)
|
|
if err != nil {
|
|
return v, err
|
|
}
|
|
|
|
return kind.MungeEmptyStringAsNil(v)
|
|
}
|
|
}
|
|
}
|
|
}
|
|
|
|
// namedDelimiters is map of named delimiter strings to
|
|
// rune value. For example, "comma" maps to ',' and "pipe" maps to '|'.
|
|
var namedDelimiters = map[string]rune{
|
|
"comma": ',',
|
|
"space": ' ',
|
|
"pipe": '|',
|
|
"tab": '\t',
|
|
"colon": ':',
|
|
"semi": ';',
|
|
"period": '.',
|
|
}
|
|
|
|
// getDelimiter returns the delimiter for src. An explicit
|
|
// delimiter value may be set in src.Options; otherwise
|
|
// the default for the source is returned.
|
|
func getDelimiter(src *source.Source) (rune, error) {
|
|
delim, ok, err := getDelimFromOptions(src.Options)
|
|
if err != nil {
|
|
return 0, err
|
|
}
|
|
|
|
if ok {
|
|
return delim, nil
|
|
}
|
|
|
|
if src.Type == TypeTSV {
|
|
return '\t', nil
|
|
}
|
|
|
|
// default is comma
|
|
return ',', nil
|
|
}
|
|
|
|
// getDelimFromOptions returns ok as true and the delimiter rune if a
|
|
// valid value is provided in src.Options, returns ok as false if
|
|
// no valid value provided, and an error if the provided value is invalid.
|
|
func getDelimFromOptions(opts options.Options) (r rune, ok bool, err error) {
|
|
if len(opts) == 0 {
|
|
return 0, false, nil
|
|
}
|
|
|
|
_, ok = opts[options.OptDelim]
|
|
if !ok {
|
|
return 0, false, nil
|
|
}
|
|
|
|
val := opts.Get(options.OptDelim)
|
|
if val == "" {
|
|
return 0, false, nil
|
|
}
|
|
|
|
if len(val) == 1 {
|
|
r, _ = utf8.DecodeRuneInString(val)
|
|
return r, true, nil
|
|
}
|
|
|
|
r, ok = namedDelimiters[val]
|
|
|
|
if !ok {
|
|
err = errz.Errorf("unknown delimiter constant {%s}", val)
|
|
return 0, false, err
|
|
}
|
|
|
|
return r, true, nil
|
|
}
|
|
|
|
func newCSVReader(r io.Reader, delim rune) *csv.Reader {
|
|
// We add the CR filter reader to deal with CSV files exported
|
|
// from Excel which can have the DOS-style \r EOL markers.
|
|
cr := csv.NewReader(&crFilterReader{r: r})
|
|
cr.Comma = delim
|
|
return cr
|
|
}
|
|
|
|
// crFilterReader is a reader whose Read method converts
|
|
// standalone carriage return '\r' bytes to newline '\n'.
|
|
// CRLF "\r\n" sequences are untouched.
|
|
// This is useful for reading from DOS format, e.g. a TSV
|
|
// file exported by Microsoft Excel.
|
|
type crFilterReader struct {
|
|
r io.Reader
|
|
}
|
|
|
|
func (r *crFilterReader) Read(p []byte) (n int, err error) {
|
|
n, err = r.r.Read(p)
|
|
|
|
for i := 0; i < n; i++ {
|
|
if p[i] == 13 {
|
|
if i+1 < n && p[i+1] == 10 {
|
|
continue // it's \r\n
|
|
}
|
|
// it's just \r by itself, replace
|
|
p[i] = 10
|
|
}
|
|
}
|
|
|
|
return n, err
|
|
}
|
|
|
|
// readRecords reads a maximum of n records from cr.
|
|
func readRecords(cr *csv.Reader, n int) ([][]string, error) {
|
|
recs := make([][]string, 0, n)
|
|
|
|
for i := 0; i < n; i++ {
|
|
rec, err := cr.Read()
|
|
if err != nil {
|
|
if errors.Is(err, io.EOF) {
|
|
return recs, nil
|
|
}
|
|
|
|
return nil, errz.Err(err)
|
|
}
|
|
recs = append(recs, rec)
|
|
}
|
|
|
|
return recs, nil
|
|
}
|