diff --git a/.changes/pre.json b/.changes/pre.json
index c994860f9..2d62f3738 100644
--- a/.changes/pre.json
+++ b/.changes/pre.json
@@ -89,6 +89,7 @@
     ".changes/fix-shell-build.md",
     ".changes/fix-tauri-binary-windows.md",
     ".changes/fix-tray-icon-validation.md",
+    ".changes/fix-windows-custom-protocol-url.md",
     ".changes/fix-xcodescript-lib-path.md",
     ".changes/force-colored-logs.md",
     ".changes/generate-tauri-activity.md",
@@ -135,6 +136,7 @@
     ".changes/mobile-plugins.md",
     ".changes/mobile-webview-access.md",
     ".changes/mobile.md",
+    ".changes/move-add-command.md",
     ".changes/move-app.md",
     ".changes/move-cli.md",
     ".changes/move-dialog-plugin.md",
diff --git a/core/tauri/CHANGELOG.md b/core/tauri/CHANGELOG.md
index 6943b8615..f8e7c7ed5 100644
--- a/core/tauri/CHANGELOG.md
+++ b/core/tauri/CHANGELOG.md
@@ -1,5 +1,11 @@
 # Changelog
 
+## \[2.0.0-alpha.13]
+
+### Breaking Changes
+
+- [`4cb51a2d`](https://www.github.com/tauri-apps/tauri/commit/4cb51a2d56cfcae0749062c79ede5236bd8c02c2)([#7779](https://www.github.com/tauri-apps/tauri/pull/7779)) The custom protocol on Windows now uses the `http` scheme instead of `https`.
+
 ## \[2.0.0-alpha.12]
 
 ### Enhancements
diff --git a/core/tauri/Cargo.toml b/core/tauri/Cargo.toml
index de51fd2ba..ceddb163c 100644
--- a/core/tauri/Cargo.toml
+++ b/core/tauri/Cargo.toml
@@ -1,6 +1,6 @@
 [package]
 name = "tauri"
-version = "2.0.0-alpha.12"
+version = "2.0.0-alpha.13"
 description = "Make tiny, secure apps for all desktop platforms with Tauri"
 exclude = [ "/test", "/.scripts", "CHANGELOG.md", "/target" ]
 readme = "README.md"
diff --git a/tooling/api/CHANGELOG.md b/tooling/api/CHANGELOG.md
index d94f5664e..cee3afd8c 100644
--- a/tooling/api/CHANGELOG.md
+++ b/tooling/api/CHANGELOG.md
@@ -1,5 +1,11 @@
 # Changelog
 
+## \[2.0.0-alpha.7]
+
+### Breaking Changes
+
+- [`4cb51a2d`](https://www.github.com/tauri-apps/tauri/commit/4cb51a2d56cfcae0749062c79ede5236bd8c02c2)([#7779](https://www.github.com/tauri-apps/tauri/pull/7779)) The custom protocol on Windows now uses the `http` scheme instead of `https`.
+
 ## \[2.0.0-alpha.6]
 
 ### New Features
diff --git a/tooling/api/package.json b/tooling/api/package.json
index ae79c15b0..731d6e74d 100644
--- a/tooling/api/package.json
+++ b/tooling/api/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@tauri-apps/api",
-  "version": "2.0.0-alpha.6",
+  "version": "2.0.0-alpha.7",
   "description": "Tauri API definitions",
   "type": "module",
   "funding": {
diff --git a/tooling/cli/CHANGELOG.md b/tooling/cli/CHANGELOG.md
index 543589b12..3b84919dc 100644
--- a/tooling/cli/CHANGELOG.md
+++ b/tooling/cli/CHANGELOG.md
@@ -1,5 +1,12 @@
 # Changelog
 
+## \[2.0.0-alpha.13]
+
+### Breaking Changes
+
+- [`4cb51a2d`](https://www.github.com/tauri-apps/tauri/commit/4cb51a2d56cfcae0749062c79ede5236bd8c02c2)([#7779](https://www.github.com/tauri-apps/tauri/pull/7779)) The custom protocol on Windows now uses the `http` scheme instead of `https`.
+- [`974e38b4`](https://www.github.com/tauri-apps/tauri/commit/974e38b4ddc198530aa977ec77d513b76013b9f3)([#7744](https://www.github.com/tauri-apps/tauri/pull/7744)) Renamed the `plugin add` command to `add`.
+
 ## \[2.0.0-alpha.12]
 
 ### Bug Fixes
diff --git a/tooling/cli/Cargo.lock b/tooling/cli/Cargo.lock
index 13d023af6..3f79bf12a 100644
--- a/tooling/cli/Cargo.lock
+++ b/tooling/cli/Cargo.lock
@@ -3945,7 +3945,7 @@ dependencies = [
 
 [[package]]
 name = "tauri-cli"
-version = "2.0.0-alpha.12"
+version = "2.0.0-alpha.13"
 dependencies = [
  "anyhow",
  "axum",
diff --git a/tooling/cli/Cargo.toml b/tooling/cli/Cargo.toml
index 1ac3df219..34eede5af 100644
--- a/tooling/cli/Cargo.toml
+++ b/tooling/cli/Cargo.toml
@@ -3,7 +3,7 @@ members = [ "node" ]
 
 [package]
 name = "tauri-cli"
-version = "2.0.0-alpha.12"
+version = "2.0.0-alpha.13"
 authors = [ "Tauri Programme within The Commons Conservancy" ]
 edition = "2021"
 rust-version = "1.65"
diff --git a/tooling/cli/metadata-v2.json b/tooling/cli/metadata-v2.json
index b6dc1f85b..2715614df 100644
--- a/tooling/cli/metadata-v2.json
+++ b/tooling/cli/metadata-v2.json
@@ -1,8 +1,8 @@
 {
   "cli.js": {
-    "version": "2.0.0-alpha.12",
+    "version": "2.0.0-alpha.13",
     "node": ">= 10.0.0"
   },
-  "tauri": "2.0.0-alpha.12",
+  "tauri": "2.0.0-alpha.13",
   "tauri-build": "2.0.0-alpha.8"
 }
diff --git a/tooling/cli/node/CHANGELOG.md b/tooling/cli/node/CHANGELOG.md
index d61c13854..c658916c7 100644
--- a/tooling/cli/node/CHANGELOG.md
+++ b/tooling/cli/node/CHANGELOG.md
@@ -1,5 +1,16 @@
 # Changelog
 
+## \[2.0.0-alpha.13]
+
+### Dependencies
+
+- Upgraded to `tauri-cli@2.0.0-alpha.13`
+
+### Breaking Changes
+
+- [`4cb51a2d`](https://www.github.com/tauri-apps/tauri/commit/4cb51a2d56cfcae0749062c79ede5236bd8c02c2)([#7779](https://www.github.com/tauri-apps/tauri/pull/7779)) The custom protocol on Windows now uses the `http` scheme instead of `https`.
+- [`974e38b4`](https://www.github.com/tauri-apps/tauri/commit/974e38b4ddc198530aa977ec77d513b76013b9f3)([#7744](https://www.github.com/tauri-apps/tauri/pull/7744)) Renamed the `plugin add` command to `add`.
+
 ## \[2.0.0-alpha.12]
 
 ### Bug Fixes
diff --git a/tooling/cli/node/package.json b/tooling/cli/node/package.json
index 5a05865e0..6cf7bc318 100644
--- a/tooling/cli/node/package.json
+++ b/tooling/cli/node/package.json
@@ -1,6 +1,6 @@
 {
   "name": "@tauri-apps/cli",
-  "version": "2.0.0-alpha.12",
+  "version": "2.0.0-alpha.13",
   "description": "Command line interface for building Tauri apps",
   "funding": {
     "type": "opencollective",