1272 Commits

Author	SHA1	Message	Date
Robin Gloster	f87de53883	sage: mark as broken	2017-03-30 12:06:08 +02:00
James ‘Twey’ Kay	c54588d250	redprl: 2016-09-22 -> 2017-03-28	2017-03-28 21:02:30 +01:00
Vladimír Čunát	96d41e393d	treewide: purge maintainers.urkud ... It's sad, but he's been inactive for the last five years. Keeping such people in meta.maintainers is counter-productive.	2017-03-27 19:52:29 +02:00
Thomas Tuegel	299c842df2	qgroundcontrol: broken on Qt 5.6	2017-03-25 08:49:39 -05:00
Maximilian Bosch	9787b2b808	geogebra: 5-0-338-0 -> 5-0-346-0	2017-03-24 22:16:57 +01:00
Peter Hoeg	317734f99c	speedcrunch: stick to qt 5.7 as 5.8 is broken	2017-03-25 00:39:30 +08:00
Ben Darwin	fbc9a4d7dc	ants: set $ANTSPATH variable in shell scripts	2017-03-22 16:01:05 -04:00
Michael Raskin	47183c813e	golly-beta: init at 2.9b2 to test GL issues	2017-03-22 17:02:55 +01:00
Franz Pletz	bfb7890fa0	Merge pull request #24191 from jbedo/bedtools ... bedtools: fix clang build	2017-03-22 15:30:19 +01:00
Justin Bedo	56aeb271c9	bedtools: fix clang build	2017-03-22 12:00:24 +11:00
Dan Peebles	7ad3fd7ca7	neuron: fix on clang 3.8 and above ... This is in preparation for upgrading Darwin stdenv to LLVM 4	2017-03-21 01:00:18 -04:00
Michael Raskin	4d5f33deff	Merge pull request #23376 from bcdarwin/ants ... ANTs: init at 2.1.0 (0gyys1lf) and update ITK accordingly	2017-03-18 18:42:24 +01:00
rht	bbd1c3d58a	coq_HEAD: Update once more	2017-03-18 01:51:38 +03:00
rht	7264efb5cb	Fold in specific ocaml version choice into let	2017-03-18 01:51:37 +03:00
rht	975d040f07	coq_HEAD: Update to the latest commit	2017-03-18 01:50:26 +03:00
Robin Gloster	f70a896094	hol: mark as broken	2017-03-14 15:36:06 +01:00
Arseniy Seroka	320a8a5a94	Merge pull request #23842 from volhovM/fix/sage_68_sed ... sage: fix build at 6.8	2017-03-13 16:51:55 +03:00
Robin Gloster	e2a13af49c	emboss: fix build	2017-03-13 13:15:51 +01:00
Mikhail Volkhov	78c0cecc5f	sage: fix build at 6.8	2017-03-13 10:34:55 +03:00
Maximilian Bosch	2df3b5ca7f	geogebra: 5-0-331-0 -> 5-0-338-0 (#23593)	2017-03-12 21:37:10 +00:00
Jörg Thalheim	4d13b5d201	Merge pull request #23631 from edef1c/verilator-shebang ... verilator: fix Perl shebangs	2017-03-09 15:05:40 +01:00
Justin Bedo	1ac797861b	SnpEff: init at 4.3i	2017-03-08 22:43:50 +01:00
Justin Bedo	076e513b94	varscan: init at 2.4.2	2017-03-08 22:43:49 +01:00
Justin Bedo	4bb50fd08c	picard-tools: init at 2.7.1	2017-03-08 22:43:45 +01:00
Justin Bedo	7f214e6410	bedtools: init at 2.26.0	2017-03-08 22:36:29 +01:00
Justin Bedo	661048c803	platypus: init at 2017-03-07	2017-03-08 22:36:03 +01:00
Ricardo Ardissone	e17d3d4ef1	gplates: use boost 160 ... update 161 changed reference parameters for optional https://hydra.nixos.org/build/49707856/nixlog/1 http://www.boost.org/doc/libs/1_61_0/libs/optional/doc/html/boost_ooptional/relnotes.html	2017-03-08 13:04:34 +02:00
edef	2c02c84cdc	verilator: fix Perl shebangs	2017-03-08 11:38:48 +01:00
Peter Simons	c5563b48ba	R: set TZDIR properly to fix test suite	2017-03-07 14:56:46 +01:00
Peter Simons	6b3eec627e	R: include output of sessionInfo() in the "make check" log ... The R developers would like that information to be included in bug reports.	2017-03-07 14:56:46 +01:00
Peter Simons	fac139e723	R: update to version 3.3.3	2017-03-07 14:56:46 +01:00
Jörg Thalheim	99e74e9509	alliance: mark as broken ... there is no maintainer for this package and even debian looks for a new maintainer.	2017-03-06 08:27:10 +01:00
Thomas Tuegel	494dc2af2e	Merge pull request #23423 from ttuegel/fricas ... fricas: 1.2.2 -> 1.3.1	2017-03-03 09:49:47 -06:00
Robin Gloster	bb9a37a2a5	ikarus: remove ... unmaintained, only works on 32 bit	2017-03-03 13:43:04 +01:00
Benno Fünfstück	253d736398	boinc: fix location of /etc in $out ... Looks like the latest version no longer requires the patch, and the patch instead resulted in /etc files being installed to `$out/$out/etc` instead of `$out/etc`	2017-03-03 12:58:43 +01:00
Thomas Tuegel	28cb067600	fricas: 1.2.2 -> 1.3.1	2017-03-02 19:39:55 -06:00
Robin Gloster	c1866cade9	libsForQt5.qmltermwidget: fix build	2017-03-02 14:13:35 +01:00
Ben Darwin	05359c327b	ANTs: init at 2.1.0 (0gyys1lf)	2017-03-01 21:06:30 -05:00
Katona László	085502dd80	cytoscape: fixed issue with startup script	2017-03-01 21:46:49 +01:00
Robin Gloster	4df663a9a2	verilator: 3.884 -> 3.900	2017-02-27 15:22:50 +01:00
Domen Kožar	4ccb553b70	Merge pull request #22817 from jbedo/r ... R: 3.2.4 -> 3.3.2	2017-02-27 14:02:13 +01:00
Bjørn Forsman	c49533a494	qt-gstreamer1: align attrname with pkgname	2017-02-27 12:16:26 +01:00
Christopher League	242f6caac6	logisim: use better jar wrapper, closes #23068	2017-02-26 10:19:32 +01:00
Gabriel Ebner	cc647804f1	lean: 3.0.0 -> 3.1.0	2017-02-26 08:50:15 +01:00
Thomas Tuegel	0ed156a216	Merge pull request #22977 from ttuegel/triage-kde4 ... Remove KDE 4 desktop packages	2017-02-25 12:21:44 -06:00
Peter Hoeg	e564a399d9	Merge pull request #22770 from NickHu/master ... fdr: init at 4.2.0	2017-02-25 14:50:04 +08:00
Thomas Tuegel	b4ba042924	qt4: Don't pass top-level attribute through kde4	2017-02-24 16:49:06 -06:00
Nick Hu	cbe765043f	fdr: init at 4.2.0	2017-02-24 11:00:02 +00:00
Justin Bedo	4bb8727284	R: 3.2.4 -> 3.3.2	2017-02-24 15:22:12 +11:00
Franz Pletz	67018e7759	pymol: fix evaluation ... cc #23007 @Mounium @Mic92	2017-02-22 08:48:42 +01:00
Mounium	eb688ac0a7	pymol: init at 1.8.4 (#23007)	2017-02-22 01:35:09 +01:00
Maximilian Bosch	10a453c61b	geogebra: add ma27 as maintainer	2017-02-19 16:51:01 +01:00
Maximilian Bosch	5d62724e27	geogebra: 5-0-328-0 -> 5-0-331-0	2017-02-19 16:44:49 +01:00
Maximilian Bosch	d95868e980	geogebra: 5-0-320-0 -> 5-0-328-0	2017-02-14 17:43:58 +01:00
Rongcui Dong	acce1d9ad2	ngspice: Add XSpice and Cider support	2017-02-13 15:23:38 -08:00
Frederik Rietdijk	2832472da0	golly: use python2	2017-02-10 09:35:10 +01:00
Celine Mercier	78c052e91a	ecopcr: init at 0.8.0	2017-02-06 16:01:08 +01:00
Ian Lancaster	5f67b7b30a	emboss: 6.0.1 -> 6.6.0	2017-02-04 19:05:48 -05:00
Joachim F	2b961075ae	Merge pull request #22231 from Ma27/hotfix/update-geogebra ... geogebra: 5.0.271.0 -> 5-0-320-0	2017-02-03 01:13:07 +01:00
Gabriel Ebner	311ec6abd5	Merge pull request #22361 from peterhoeg/u/crunch ... speedcrunch: 0.11 -> 0.12.0	2017-02-02 07:54:06 +01:00
Rongcui Dong	7ea20c9e27	ngspice: 25 -> 26	2017-02-02 07:42:26 +01:00
Peter Hoeg	58a5d0783e	speedcrunch: 0.11 -> 0.12.0 ... Also: - build against qt5 instead of qt4	2017-02-02 09:13:54 +08:00
Gabriel Ebner	ac10c19746	veriT: 201506 -> 2016	2017-02-01 19:43:02 +01:00
Damien Cassou	58dc8e3024	Remove myself from maintainers	2017-01-31 11:00:14 +01:00
Maximilian Bosch	eda5bca00a	geogebra: 5.0.271.0 -> 5-0-320-0	2017-01-28 17:33:20 +01:00
Vincent Laporte	d40b680101	coq-8.4: fix build of ssreflect and mathcomp	2017-01-25 13:14:31 +00:00
Vincent Laporte	798a87159b	Coq: propagates the findlib package ... So that Coq libraries that need it can easyly use it	2017-01-25 10:29:13 +00:00
Vincent Laporte	9b949be617	coq: minor refactoring	2017-01-25 10:29:13 +00:00
Vincent Laporte	a30e8db9f0	coq: merge files 8.5.nix and 8.6.nix into default.nix	2017-01-25 10:29:13 +00:00
Vincent Laporte	86b74fb76b	alt-ergo: 0.99.1 -> 1.30	2017-01-21 13:44:41 +00:00
Vincent Laporte	8c928cd55a	why3: 0.87.1 -> 0.87.3	2017-01-21 13:31:10 +00:00
Gabriel Ebner	6c9f4a61be	lean: 2017-01-14 -> 3.0.0	2017-01-20 10:59:54 +01:00
Gabriel Ebner	5ad75554b6	lean: 2017-01-06 -> 2017-01-14	2017-01-14 09:37:48 +01:00
Pascal Wittmann	89dfe67f81	Merge pull request #21819 from AtnNn/isabelle ... isabelle: 2016 -> 2016-1	2017-01-13 21:58:57 +01:00
Etienne Laurin	3d301e384e	isabelle: 2016 -> 2016-1	2017-01-11 17:33:04 -05:00
Michael Raskin	39ed261c4c	Merge pull request #21632 from veprbl/sherpa_fix ... sherpa: fix sqlite dependency	2017-01-09 09:58:22 +00:00
Dmitry Kalinkin	0f71012fe6	sherpa: add useful dependencies	2017-01-07 01:36:51 -05:00
Vladimír Čunát	07bf828bd9	Merge branch 'staging'; security /cc #21642	2017-01-06 16:32:47 +01:00
Gabriel Ebner	74a97421ce	lean: 2016-12-30 -> 2017-01-06	2017-01-06 11:57:40 +01:00
Dmitry Kalinkin	2f23d60323	sherpa: fix sqlite dependency	2017-01-04 04:59:06 +00:00
Daiderd Jordan	27660cfdc0	Merge branch 'master' into staging	2017-01-04 01:42:26 +01:00
Domen Kožar	af2cfc076f	haskellPackages.z3: fix #16357	2017-01-03 23:10:24 +01:00
Michael Raskin	7c5784d1f0	maxima: 5.38.1 -> 5.39.0	2017-01-02 21:53:21 +01:00
Daiderd Jordan	5a67b130b9	Merge branch 'master' into staging	2017-01-02 00:54:17 +01:00
Dmitry Kalinkin	c7bcb99ff2	root: 6.04.18 -> 6.08.02 ... This relies on e9d60c56 ('libc++3.7: fix to use with modern compilers')	2017-01-01 17:52:03 -05:00
Pascal Wittmann	039e90c9d3	fityk: 1.3.0 -> 1.3.1	2017-01-01 18:19:39 +01:00
Gabriel Ebner	68b2d43c88	lean: 2016-12-08 -> 2016-12-30	2016-12-31 13:51:10 +01:00
Dmitry Kalinkin	8fb6895614	sherpa: init at 2.2.1	2016-12-30 14:27:55 -05:00
Michael Raskin	e65cccb776	Merge pull request #21221 from rardiol/gplates ... gplates: init at 2.0.0	2016-12-28 10:21:23 +00:00
mimadrid	29cb10c021	igv: 2.3.77 -> 2.3.89	2016-12-23 19:37:10 -05:00
John Wiegley	4888bfecc2	coq_8_6: 8.6 is now default, 8.4 optional, updated mathcomp/ssreflect ... Addresses #14829	2016-12-22 10:35:56 -08:00
Jason Daniel Augustine Gilliland	59ca5d213f	freebayes: init at 1.1.0 ... Signed-off-by: zimbatm <zimbatm@zimbatm.com>	2016-12-22 14:10:37 +00:00
ft@zeus	1b8aec421b	stellarium: 0.14.3 -> 0.15.0 ... close #21271	2016-12-21 20:22:44 -05:00
Ricardo Ardissone	662aa495df	gplates: init at 2.0.0	2016-12-16 22:29:53 -02:00
John Wiegley	838a3b4294	coq_8_6: 8.6rc1 -> 8.6	2016-12-14 13:46:07 -08:00
John Wiegley	62934023c3	coq_HEAD: Update to the latest commit as of 2016-12-13	2016-12-13 08:09:23 -08:00
John Wiegley	360234dab6	coq_8_6: new package, based on Coq 8.6rc1	2016-12-13 07:27:15 -08:00
Eelco Dolstra	c5b96ca801	minisat: Fix build on Darwin	2016-12-09 19:57:07 +01:00
Gabriel Ebner	a2210a9efd	lean: init at 2016-12-08	2016-12-08 10:30:28 -05:00
Gabriel Ebner	ce2a9a8f9b	lean2: 2016-07-05 -> 2016-11-29 ... Renamed from lean since upstream renamed it as well. The lean attribute in nixpkgs will now refer to the new lean 3 version.	2016-12-08 10:30:28 -05:00
Michael Raskin	3a98749bd1	pari: 2.9.0 -> 2.9.1	2016-12-08 16:15:18 +01:00
Vincent Laporte	431c564993	hol_light: fix build with Camlp5-6.17	2016-11-29 18:34:21 +00:00
Nicolò Balzarotti	f390d68b75	yarp: 2.3.66.1 -> 2.3.68	2016-11-28 17:03:19 +01:00
Michael Raskin	fcc5a4d3b8	Merge pull request #20672 from AndersonTorres/pari ... pari/gp: 2.7.6 -> 2.9.0	2016-11-26 13:34:15 +00:00
Ole Krüger	a31c37c759	[mathematica] 10.0.2 -> 11.0.1	2016-11-25 12:13:41 +01:00
AndersonTorres	d395439a10	pari/gp: 2.7.6 -> 2.9.0 ... Adding gp2c compiler, too.	2016-11-24 22:44:56 -02:00
Vladimír Čunát	4c19651108	Merge #20264: root: fix environment setup	2016-11-14 22:27:09 +01:00
Justin Bedo	a6d6a3972f	plink-ng: init at 1.90b3	2016-11-14 20:28:39 +11:00
Shea Levy	2ded9f3f7b	coq: Improve emacs buffer handling	2016-11-13 14:01:01 -05:00
Austin Seipp	0bdc0143fe	nixpkgs: proverif 1.94 -> 1.95 ... Signed-off-by: Austin Seipp <aseipp@pobox.com>	2016-11-10 03:45:51 +00:00
Frederik Rietdijk	3b5d5041ef	Merge pull request #20267 from jbedo/master ... Fix bcftools installation prefix	2016-11-09 21:57:46 +01:00
Gabriel Ebner	8c4aee4c79	z3: 4.4.1 -> 4.5.0	2016-11-08 16:14:16 -05:00
Justin Bedo	ec31e2cc27	Fix bcftools installation prefix	2016-11-09 08:03:04 +11:00
Tim Steinbach	6d11e8ed4c	Remove pal2nal ... No longer build/exists	2016-11-03 21:58:47 -04:00
Tim Steinbach	c36a1d6502	paml: 4.2a -> 4.9c	2016-11-03 21:33:19 -04:00
Vincent Laporte	b028b5f4ef	coq-8.5: ease the selection of an older (patch level) version	2016-11-02 19:39:22 +01:00
Vincent Laporte	b840da02cd	coq: build and install the votour utility	2016-11-02 19:23:15 +01:00
Vincent Laporte	da68cc24f0	coq: 8.5pl2 -> 8.5pl3	2016-11-02 19:23:15 +01:00
vbgl	7f241baaaf	Merge pull request #19902 from dtzWill/update/yices ... yices: 2.3.1 -> 2.5.1	2016-10-31 09:35:21 +01:00
Will Dietz	0443affe17	yices: Add darwin to meta.platforms	2016-10-30 13:38:07 -05:00
Dmitry Kalinkin	9434ec5441	root: fix environment setup ... 1) s/envHook/postHook/ 2) patch to not set $p that fixes nested ```nix-shell -p root``` calls	2016-10-29 14:47:32 -04:00
Ertugrul Söylemez	9c8f6fb4fb	pari-unstable: 2.8.0 -> 2.8.1, "alpha" -> "unstable".	2016-10-27 14:48:03 +02:00
Michael Raskin	f9f23084d9	pari_alpha: fix source link	2016-10-27 12:17:16 +02:00
Will Dietz	3cf27a654a	yices: Build in parallel, run tests, fix test shebang.	2016-10-26 13:01:21 -05:00
Will Dietz	8584ec97ed	yices: fix install target by using 'true' as ldconfig	2016-10-26 12:59:34 -05:00
Will Dietz	1f89121551	yices: 2.3.1 -> 2.5.1	2016-10-26 12:59:06 -05:00
Frederik Rietdijk	7077a270bf	Merge remote-tracking branch 'upstream/master' into HEAD	2016-10-26 13:06:43 +02:00
Michael Raskin	28aa92de64	maxima: support building with ECL; optionally support building maxima.fas when building with ECL	2016-10-26 11:06:41 +02:00
Michael Raskin	36804c75e4	singular: Wrap executables instead of symlinking ... This way config scripts can fidn out their own location	2016-10-26 11:06:40 +02:00
Michael Raskin	2bed05d8e1	singular: add an option to install as libsingular	2016-10-26 11:06:40 +02:00
Michael Raskin	8e9ad9bfdc	pari_alpha: use perl to generate function descriptions	2016-10-26 11:06:40 +02:00
Michael Raskin	5af1b7ad02	singular: 3-1-2 -> 3-1-7	2016-10-26 11:06:39 +02:00
Michael Raskin	93bea1ecb0	R: 3.2.3 -> 3.2.4	2016-10-26 11:06:37 +02:00
Michael Raskin	5f418b75d6	nauty: init at 26r7	2016-10-26 11:06:36 +02:00
Michael Raskin	a67a50895c	gfan: init at 0.5	2016-10-26 11:06:36 +02:00
Michael Raskin	71f659d86d	pari_alpha: init at 2.8.0.alpha: planning to use for Sage	2016-10-26 11:06:34 +02:00
Michael Raskin	411d5742ca	symmetrica: init at 2.0	2016-10-26 11:06:33 +02:00
Michael Raskin	c450d7b0a8	ratpoints: init at 2.1.3	2016-10-26 11:06:33 +02:00
Frederik Rietdijk	e56832d730	Merge remote-tracking branch 'upstream/master' into HEAD	2016-10-22 17:23:24 +02:00
Vladimír Čunát	4328629bf8	treewide: fix meta evaluation ... There is no `stdenv.maintainers`. /cc @veprbl.	2016-10-22 12:05:23 +02:00
Jörg Thalheim	9c0b5e4b22	Merge pull request #19666 from veprbl/hep_for_upstream ... Add fastjet, hepmc, yoda, rivet, lhapdf, herwig, pythia, sacrifice, nlojet++	2016-10-21 21:58:45 +02:00
Dmitry Kalinkin	ef96b48659	root: s/python/python2/	2016-10-21 15:47:38 -04:00
Dmitry Kalinkin	59a8aff8e6	root: add veprbl to maintainers	2016-10-21 13:30:30 -04:00
Dmitry Kalinkin	b4e3e7b752	add veprbl to maintainers	2016-10-21 13:29:57 -04:00
=	d6880b210c	yarp: 2.3.65 -> 2.3.66.1	2016-10-20 19:34:03 +02:00
Dmitry Kalinkin	3324d8dc72	sacrifice: init at 1.0.0	2016-10-19 02:17:16 -04:00
Frederik Rietdijk	8963dae343	z3: use python2	2016-10-18 23:16:07 +02:00
Shea Levy	eca0f17ad2	nix-buffer support improvements. ... Use inherit-local, add per-package elisp hooks.	2016-10-07 10:31:37 -04:00
Kirill Boltaev	3e646865f4	treewide: use ocaml.version (#19192)	2016-10-05 09:32:30 +02:00
Aneesh Agrawal	fcee1d0b28	Remove redundant -DCMAKE_BUILD_TYPE=Release flags ... Since commit 183d05a0 in 2012, this is the default. fixes #18000	2016-10-01 16:13:41 +02:00